G115862


Basic Information

Item Value
gene id G115862
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18683714 ~ 18684465 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156234
atttaaacagactgaaatgtccaggctcactcccccactaatgattcatttatttctgcatgtagttattcatttaacgagacttaaagtcatgtttcgtcatccacagtccgagtcccgccagactccctttaggaaacctgtgatttaaacttcagcaggttgtgacagtccgctccgctcagtcctggatctgattctcccgggcttcccttccctccagcgggcccagcaatacggcctgggtctccagctgcgtggtgtcggttttggctcccaggaatgggcagtgagctccaggtcctgcagctgcagacggactcagctgcccccccgctgtagcttcgatccggccgcggctgtcgatacgttccccgtttttccaatgtttccgtcaggtccgcgtcctttaaaaactcaaaacaccgaccacacgtaaagtcaccataaacttcattcacgccatatactcactcacaacaacacaaattgactgcgctcaccagcaACACccgcaacacctcatcacttccggtatgt
>TU156236
atttaaacagactgaaatgtccaggctcactcccccactaatgattcatttatttctgcatgtagttattcatttaacgagacttaaagtcatgtttcgtcatccacagtccgagtcccgccagactccctttaggaaacctgtgatttaaacttcagcaggttgtgacagtccgctccgctcagtcctggatctgattctcccgggcttcccttccctccagcgggcccagcaatacggcctgggtctccagctgcgtggtgtcggttttggctcccaggaatgggcagtgagctccaggtcctgcagctgcagacggactcagctgcccccccgctgtagcttcgatccggccgcggctgtcgatacgttccccgtttttccaatgtttccgtcaggtccgcgtcctttaaaaactcaaaacaccgaccacacgtaaagtcaccataaacttcattcacgccatatactcactcacaacaacacaaattgactgcgctcaccagcaACACccgcaacacctcatcacttccggtatgtggtacattccctttccgtgaagaatctgtcatttgtaaatttgtttcgggacttgtaaaagtgttttgcatcttgttaatttgttttctaaaatgtaaatttgttttctaaaatgttattttgttttccaaaatgttattttgttttccaaaatgtaaatttgttttctaaaatgtaaatttgttttctaaaatgtaattttgttttccgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156234 False 540 lncRNA 0.52 1 18683714 18684253
TU156236 True 752 lncRNA 0.44 1 18683714 18684465

Neighbor

gene id symbol gene type direction distance location
LOC120568684 NA coding upstream 1295 18680600 ~ 18682419 (+)
nadkb LOC103353035,LOC102782138,LOC101483211,LOC102289018 coding upstream 58537 18609213 ~ 18625177 (+)
prkci prkci coding upstream 127354 18521969 ~ 18556360 (+)
dapk3 dapk3,LOC102784251 coding upstream 178047 18496691 ~ 18505667 (+)
arhgef18a NA coding upstream 203993 18466050 ~ 18479721 (+)
LOC120568690 NA coding downstream 15017 18699482 ~ 18701227 (+)
apoda.1 LOC103353029,LOC104955147,LOC101484702,LOC102313692,LOC102209340 coding downstream 31893 18716358 ~ 18718511 (+)
and2 LOC103353068 coding downstream 46263 18730728 ~ 18737190 (+)
LOC120568945 LOC101485289,LOC100699127 coding downstream 71741 18756206 ~ 18799833 (+)
lrrcc1 lrrcc1 coding downstream 119186 18803651 ~ 18820386 (+)
G115856 samd7 non-coding upstream 33910 18648774 ~ 18649804 (+)
G115826 sec62 non-coding upstream 37331 18632716 ~ 18646383 (+)
G115793 NA non-coding upstream 193528 18488531 ~ 18490186 (+)
LOC120567854 NA non-coding upstream 218264 18458181 ~ 18465450 (+)
G115781 NA non-coding upstream 228094 18454033 ~ 18455620 (+)
LOC120568663 NA non-coding downstream 5169 18689634 ~ 18692121 (+)
G115863 NA non-coding downstream 8540 18693005 ~ 18694301 (+)
G115864 NA non-coding downstream 9926 18694391 ~ 18694646 (+)
G115889 NA non-coding downstream 149078 18833543 ~ 18833742 (+)
G115921 NA non-coding downstream 158107 18842572 ~ 18842794 (+)
LOC120568691 NA other upstream 9574 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 81451 18566633 ~ 18602263 (+)
G115729 NA other upstream 329370 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 653819 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 1200161 17406497 ~ 17483553 (+)
LOC120568911 NA other downstream 35900 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 332574 19017039 ~ 19052242 (+)
emilin2a NA other downstream 762546 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1688762 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 2198152 20882617 ~ 20915322 (+)

Expression


Co-expression Network