G115863


Basic Information

Item Value
gene id G115863
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18693005 ~ 18694301 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156238
TAGAATATGTTAACTGACATCCACAACTACTAATGttcagtagggctgcacgattcagaaaatgtcacgattcaatatcaattttcgtagggctgtgttcgattgaagaaattcttagtcgactaacattcaactcattcaactgtatcgactaatcgattagttgatttaatcgacagatctgtaaatctgagtttctccgcaaagagtcatgcaaaaggatgcatatattgaataagataatgcctcctttgcatatttaaacacaacatttcagaaaacgtgtaatacaacaaataactgcCTTAATGAAAGTTATTAAAGTAGATTTCACGGTGATATCTATTAGgtaaaatgtcaacccttaattcttgtgtttaccagagatgtgctcgtacgtttcttggaaataagtcattcagcatgaaaaaagcatcaaacatgactaatcgactaaagaaatctaagttgactaagaccaaaacgaccgattagtcgactaatcgactaagagggagcagccctagattTTCGATTAAAAAACGAttctcaattaaaaaaaaaacgattcacagtatgtaaatgtagtgacTTTTctcatgtgattgcagtagacgtacaataaaaaatgtattaaaatttttttttcggtagagcttgaatcgcgattcaaatgtgaatcgatttttgcaCACCTACTGTCCAGGCAACACTGtttattaaaggaatagtttagcattttttaagtggggttcTATGAGGTACCTATGCATAGTTATGGAGATGGCGATGAGTGCAGTCACTATAAGGAGATGGGGGAGATGTCACTGTAGCAGAAGTCATCCTTGTACTGTGGAGGTGAGtagaaaaaaagcctttttaccACATAGGAAATGCTTacctaaaataataataaatgtctgttcAAATGTACACAAAATGTTGTCTCTGCTTTAGTTTGCCGCcagacagacatttatttttgcactttttttttttgaagtgtaGTTTCGGCCATATATTTCTGCACCAACTCCCCTGCTCTGATTTGGCGTGTTGAGTGATTCGCTGCACTCCACCAGCACAAGTTGGCATAGTAATACAGGGCTAAGGGACATCTCCCCCAAACTCCTTATAGTGAATGCACTAATCACCATCTCCATAAGGGAAAAGACTATGCATAGGTAGCTCATACAACCGCACTTCAAATATGCTGAGCTATCCTTTTAACTGTCTCTGCTACTAACAAACATTGCTCTATCTGTACACTTCTTAAGTTTTTGTCTCCTCTTCTACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156238 True 1297 lncRNA 0.37 1 18693005 18694301

Neighbor

gene id symbol gene type direction distance location
LOC120568684 NA coding upstream 10586 18680600 ~ 18682419 (+)
nadkb LOC103353035,LOC102782138,LOC101483211,LOC102289018 coding upstream 67828 18609213 ~ 18625177 (+)
prkci prkci coding upstream 136645 18521969 ~ 18556360 (+)
dapk3 dapk3,LOC102784251 coding upstream 187338 18496691 ~ 18505667 (+)
arhgef18a NA coding upstream 213284 18466050 ~ 18479721 (+)
LOC120568690 NA coding downstream 5181 18699482 ~ 18701227 (+)
apoda.1 LOC103353029,LOC104955147,LOC101484702,LOC102313692,LOC102209340 coding downstream 22057 18716358 ~ 18718511 (+)
and2 LOC103353068 coding downstream 36427 18730728 ~ 18737190 (+)
LOC120568945 LOC101485289,LOC100699127 coding downstream 61905 18756206 ~ 18799833 (+)
lrrcc1 lrrcc1 coding downstream 109350 18803651 ~ 18820386 (+)
LOC120568663 NA non-coding upstream 884 18689634 ~ 18692121 (+)
G115862 NA non-coding upstream 8540 18683714 ~ 18684465 (+)
G115856 samd7 non-coding upstream 43201 18648774 ~ 18649804 (+)
G115826 sec62 non-coding upstream 46622 18632716 ~ 18646383 (+)
G115793 NA non-coding upstream 202819 18488531 ~ 18490186 (+)
G115864 NA non-coding downstream 90 18694391 ~ 18694646 (+)
G115889 NA non-coding downstream 139242 18833543 ~ 18833742 (+)
G115921 NA non-coding downstream 148271 18842572 ~ 18842794 (+)
G115923 NA non-coding downstream 170825 18865126 ~ 18866134 (+)
G115931 NA non-coding downstream 228452 18922753 ~ 18923170 (+)
LOC120568691 NA other upstream 18865 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 90742 18566633 ~ 18602263 (+)
G115729 NA other upstream 338661 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 663110 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 1209452 17406497 ~ 17483553 (+)
LOC120568911 NA other downstream 26064 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 322738 19017039 ~ 19052242 (+)
emilin2a NA other downstream 752710 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1678926 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 2188316 20882617 ~ 20915322 (+)

Expression


Co-expression Network