G115868


Basic Information

Item Value
gene id G115868
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18689229 ~ 18691179 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156247
CTCTTCATCCAGTCCCTTAAGGAGTTGATCCATCTCAGACGGAAAAGCTGGCCTCCTAGCCCGATAGAGTCCAAGCAGTCCTAGAGTGTGCTGATTAATGGCTGCTCTAAAGTCGTCTAGTAGGTTCTTGTTGGTGATCCGATAGAACTCTGCCTGCCTCTGTGATACAGACAGTAGGCCTAGTGCTTCAGGAGAACAGCTTCATTGAGGTTGGTGAATTTGCAGGATTTGCATTGCATTCAACTCAATCTGTGCGGACCAATTGTAGTGTGGGCTCCAGGTTTCATGCAGCGTCACGCTACAGGCATGTCGCGGGGATCTGATGACTTCAAGTGACTATCTTCAACTCGGAAAGTTGGCTTTCCCGCATTTCACAACAAAGACATATGAGTTATCAGAACTTTCTCCACTTGTTGTGgacatttaaatataagttGTGCATCCCAACTGAATTATGTATTTTGTAATGACTTACTAAATGCCGTTGAATCATACAAATTTGAACTTTTGCTGGAGCGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156247 True 521 lncRNA 0.45 2 18689229 18691179

Neighbor

gene id symbol gene type direction distance location
samd7 samd7,LOC102781561 coding downstream 34033 18647081 ~ 18655196 (-)
sec62 sec62,LOC102781860 coding downstream 42814 18628974 ~ 18646415 (-)
gpr160 NA coding downstream 84439 18603307 ~ 18604790 (-)
phc3 NA coding downstream 168206 18508455 ~ 18521023 (-)
LOC120569106 NA coding downstream 382612 18300412 ~ 18306617 (-)
ackr4a LOC103360849 coding upstream 145493 18836672 ~ 18841174 (-)
si:ch211-106h4.6 plxdc2,LOC103360851 coding upstream 228020 18919199 ~ 18930384 (-)
si:ch211-106h4.4 NA coding upstream 246203 18937382 ~ 18961367 (-)
LOC120568598 NA coding upstream 272076 18963255 ~ 18966775 (-)
LOC120568757 LOC103360862,LOC102206787,LOC102301563 coding upstream 427963 19119142 ~ 19127195 (-)
G115867 NA non-coding downstream 4985 18683606 ~ 18684244 (-)
LOC120568692 NA non-coding downstream 25453 18662841 ~ 18663776 (-)
G115851 LOC103353035 non-coding downstream 68009 18620833 ~ 18621220 (-)
G115848 NA non-coding downstream 73957 18614801 ~ 18615272 (-)
LOC120568822 NA non-coding downstream 153616 18534647 ~ 18535613 (-)
G115917 NA non-coding upstream 143345 18834524 ~ 18834763 (-)
LOC120568670 NA non-coding upstream 156884 18848063 ~ 18849606 (-)
LOC120568676 NA non-coding upstream 169534 18860713 ~ 18863108 (-)
G115944 NA non-coding upstream 174047 18865226 ~ 18866084 (-)
G115967 NA non-coding upstream 287853 18979032 ~ 18980054 (-)
sppl2 sppl2b other downstream 194741 18480670 ~ 18494488 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 631070 18052984 ~ 18058159 (-)
ly97.3 NA other downstream 1580325 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 1644167 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 1877311 16756331 ~ 16811918 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 11885 18703064 ~ 18720587 (-)
G115941 NA other upstream 153726 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 240795 18931974 ~ 18935491 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 530612 19221791 ~ 19222726 (-)
G116138 NA other upstream 773521 19464700 ~ 19465380 (-)

Expression


Co-expression Network