LOC120568770


Basic Information

Item Value
gene id LOC120568770
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19017039 ~ 19052242 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156400
ATCATCTGCCAGAAATGCATAGATAAAGTTGTTAGCTGTGAGACATCTCAGAAGAATACTAACAATGAAGATAACTTGCACAGCCTTGGTGCTTCTCATCCAAACATTACAATGTTTGGCCTCAGATGATTCACCATTTCTACTAACTAACAAGGCCACTGGTttttgtttggttaaaaaaaataacttctgcTTTGACGTACGCTGGACAACTGGTGACCGACTACTGGTTTTGTGGTTCAGTAAGTGCCTGGGAGTCCAGGGGAAAAGTGTGGGAAGTGAAATAGGCCTCTACGATTGTGATGAAAACAGCGACCTCCAAAAGTGGGAATGCAAGAATGGAACAGTGCTCGCCCTCAAAGACCAAGAGCTTTACATTGAGCTCACTGCAGATAACACAGCAGTGCTCTCCAAAACAATAGGACCCAATAACCACCTCACAATCTCAGGGACCTCCAGTGGTGCTTGTGCAAGAACATACAGAGAACTTTACACTATTGGAGGAAATGCAAATGGTAGGCCCTGCATGTTTCCCTTCCTGTACAAAGACCAGTGGTACTCAGCCTGTACTGAGACTGACCAACGTTGGTGTGCAGTTCAAACTAGATATGAACATGAAGTCTGGGGCTACTGCCCAACTAACTCCAGAGAACACTGGAGCAAACACCCAACAGGAGCGTATTaccagctcaacacacaggcaGCTCTGACTTGGCCCCAGGCTGAAGCCAGCTGTAAACAGCAGGGGGCCTCCCTGCTCAGTATCACCGATCCTAAC
>XM_039816472.1
TCATTCACACAACTCCTAAATCATCTGCCAGAAATGCATAGATAAAGTTGTTAGCTGTGAGACATCTCAGAAGAATACTAACAATGAAGATAACTTGCACAGCCTTGGTGCTTCTCATCCAAACATTACAATGTTTGGCCTCAGATGATTCACCATTTCTACTAACTAACAAGGCCACTGGTttttgtttggttaaaaaaaataacttctgcTTTGACGTACGCTGGACAACTGGTGACCGACTACTGGTTTTGTGGTTCAGTAAGTGCCTGGGAGTCCAGGGGAAAAGTGTGGGAAGTGAAATAGGCCTCTACGATTGTGATGAAAACAGCGACCTCCAAAAGTGGGAATGCAAGAATGGAACAGTGCTCGCCCTCAAAGACCAAGAGCTTTACATTGAGCTCACTGCAGATAACACAGCAGTGCTCTCCAAAACAATAGGACCCAATAACCACCTCACAATCTCAGGGACCTCCAGTGGTGCTTGTGCAAGAACATACAGAGAACTTTACACTATTGGAGGAAATGCAAATGGTAGGCCCTGCATGTTTCCCTTCCTGTACAAAGACCAGTGGTACTCAGCCTGTACTGAGACTGACCAACGTTGGTGTGCAGTTCAAACTAGATATGAACATGAAGTCTGGGGCTACTGCCCAACTAACTCCAGAGAACACTGGAGCAAACACCCAACAGGAGCGTATTaccagctcaacacacaggcaGCTCTGACTTGGCCCCAGGCTGAAGCCAGCTGTAAACAGCAGGGGGCCTCCCTGCTCAGTATCACCGATCCTAACGGAAGGACATACctcacagcaCTACTAAGGACAGCGGGCAGGGGACAGGGGGACAAGCTTTGGTCTGGACTGATCCGGAACCCAGAACATGGCTGGCAGTGGTCTAATGGAAGGCCTTACCGTTATCTGAATTGGGACTCAGGACATCCACTTCCTAATCCGGGACACGACTGTACAATTGTTGATGGTGCTGTACAGTATGCCTGGCAAAGTTCATCATGCACCAAGAAACTGGGCTACATCTGCTACAGTGAAGGACCTGTGGCTCCTCCTACTGAAGCTGTTGAGACAGGATTTTGTTCAAGCCCTTGGATTCCCTACAATGGCCACTGCTTCCACCTCCAACGTACTCAGAAAACATGGTCTGATGCTAAGAAAGCGTGCCGCAAAGAAGGAGGGGACCTAGTCAGCATCCGCAATGTGGAGGACCAAAGCTTTGTCATCTCTCAGCTTGGCTATGCATCCACTGATGAGCTTTGGATTGGACTGAATGACAAGAAGACAGAAGGGCTGTTTGACTGGAGTGACCACTCTACTGTCAGCTTTACCAGATGGGAGTTTGGGAAACCTGCTGTCTTTACTGACCAAGAAGACTGTGTTCTCATCAGGGGAGAGAATGGGAACTGGGCTGACCGTACGTGTGACGAGAAACATGGCTTCATTTGTATGAAGATGAGCGCCTCTGAACCCTCTGGAGATGAAGTGGAGCAGAATGTAGGCTGCAAAAGTGGTTGGAAAAGACATGGTTCCTACTGCTACTTTGTAGGAACGGAGACAAAGACGTTTGATGAAGCTAAAGATGACTGCAAGACCTCAGATGCTTACTTAGCTGATGTTTCAAATGGGGTGGATAATGCCTTCCTCGTCAGCTTGGTGGGGATGAGACCAGAGAAGTACTTCTGGCTAGGCCTCTCAAACCAGAAAGACATTGATCAATTTGTGTGGACCAACACAGACTCCGTGAGGTTTACTCACTGGAATGCTGAAATGCCAGGTTACCAACAGGGCTGCGTTGCCATGACAACTGGGTTTTTTGCTGGCCTCTGGGAAGTTATGCCATGCACCAATAAGACAAAATACATTTGCAAACACCTGGCAGAGGGGGCTGTTTTAACGCCTGCACCACCAACTCCTACCCCTCTCAAGTGTGCAGACGGCTggaataaaatacaaacaagaAACTTCTGCTATAAGCTGTTTCCAGAGTCATCTTCAAACAAGAGGACCTGGTATGAGGCCAGAGATTACTGCAGGGCCATCGGAGGAGACCTGCTCAGCATCCACAGCGCTGCTGAGCAAATAATTGGACGCTTTGGAACAGTCTGGATTGGACTTAGTGCCCCTGACCCAGGAAGCGGTTACGTATGGAGCGATGGATCCCCAGTAAACTTTCAACACTGGAAGGACGGAGGGCCAAATAATAGAAACAATGTGGAATCTTGTGCTGAATTTATACCAAATCTGCAGGATCATGTAGGGTCTTGGAACAATGTGCATTGTGAGAAGTACAACAGATGGCTGTGTCAGATCCGAGCAGGCGCAACTCCAAAGGCACCTCCAGACCCCGTCACTCCTGACTACAATAAGACGTCAGATGGGTGGCTAGAATGGAATGGGAATCAGTATTATATTAACAGTATGTCGATGGCCATGGAAGAAGCTCGTAGCTTCTGCCAACGGAGGCATAGTGACTTGGTAACTATCAACACTGAAGCTGAAAGTGTCTTTTTGTGGAAACAGatATCACAACATAATGAACATTACTGGATAGGCCTGACACTAGATCTCGATCAAACACTTGAGTGGGTGGATGGTTCTCAAGTGGTGTTTCAAAGGTGGGATAAAGGTCAGCCTGATTTCCATAACTATGATGAGAACTGTGTTGTGATGACCTATTCTACTGGGTTCTGGCACGATTATAATTGTGGTTATGAGCACAGTTCCATTTGTAAACGCAGTGGATCACCACCTGCCAACACAACTGTGGCACCCACAGTGGCCCCTAAAGGTGCCTGTCCATCCCAGTGGAAGAGATTTAACTCAAAGTGTTACAGAATCTTTAATGACCAGAAGGTAACATGGCGTGAAGCGAGGACACAATGCCAAGATGTGGGTGGAAACTTGGCCTCCATTCCCTCCAGACATGTGGAAGtgtttttgatgACTCAAATGGCTGACACACCTGCTACTACAGATGTTTGGATTGGTTTGCGCAGAACAAATACACGTGAATTTTTTTGGACTGATGGGCGACCGAGGCGATATGTCAACTTGGATTTAGCAGAACGCCGTATATTCAATCTATTTGGATCAAGATTTCTGGACCGAGAGGGTGCTCACAGATTTTCTCAATGGCTACATAATCAACAAGAGGAACAGTGTGTTGTAATCCAAAGTGATCATTCGATTGGTATTGGGCAATGGATACCAAAGTCCTGCAAAGACACAAATGGATTTGTCTGTCTTCAAAATATTGACCCATCCCTCCCAGACTCCCCTGAACCAACAACTTCTACCAACTATGTCAAAATATTTAATGACTCTATCAAGGTTGTTACTCAACAAATGAACTGGGATGAAGCCAAAAAGCACTGCGAAGGTGATGGTGCCACACTGGCTAGCCTGCGAAACTGGTGGTCACAGGCCTATGTTGAGCTGCTGGCTTTGAATCTCAACGCTCCTCTGTGGATTGGACTGAACAAAGTGCAGACAAATGGGTACTTCACATTTACTGATGGCTGGCACATGAGCTTTTCTCACTGGGGTAAAAATGAACCAAGCGGTGACCGACCTTGTGTCTACGTAGATCTGGATGGAAAATGGAAGACTGCTGACTGCAATCGGACCATGAACAGTGTTTGTATGAGGTCTACAGATTTGCCACCAACAGAGTCAAGTGGTTTTCCAGGAGTTTGCCCTGAAGATCCAGATTCATCAAATACAGACCAGCATTACTTCTGGCTACCATTTAAAGGTTACTGTTACATATTTTTCACAGAAGAAAAAGAGTGGGCAGATGCATCTACTAGCTGTGTAAGACATGGTGGATCACTAGCCAGTATTGAAGATCCCTTTGAGCAAGAATTCATTCAAAGCAATGCAAACATCTTTAAAGACAGCCACACCTCATTCTGGATTGGCCTGTTTCAAACTCACAAAGGGGAATGGTTGTGGTTGGACAAAACGGTCATGGACTACACTAACTGGGCTGAAGGTCAACCTGGTGATCGCAGCTACGGAGGGATTAGCACTTCAACTGGGAAGTGGAGTGCAGGCCATCGGCAGTATTCTAGACCATACATTTGCAAAACAGCCAAAgTATTACCACCAACACTTCCAACATCACCAGCTGCTGTAGTTGATCTTGGTCAACGTGGCCACAGACCTTTGGCAATTGTGGTGGTCATTACTGGGATTGCCATTGGGGTGGTCATTGCCTTATTCCTCTCCAAGAAGTTCAATCGTCGCTTACCCGTCAATGACACGTTAACCACCTTTGACAACCCAGTCTTCAGCAATGAGTGGTCACAGCCTAATGTGGTTGACACCAATGATCATGTAGAGAACGTAGAGGAAAAGAGCCCTGAGCCCCTTATAACACAAAAATGAACAGAATCAGAATCTAATGGTACACATACTCTTATCGAGGGCTCATGGTTAGTGGCTTCTCTTTTGCATGGCCAATGATTTCACATTCTGTTCTGAGATGAGAGGACTTGGCAATGAGTGGCTATAATGGCCAAATCTATTTAGACTGTAGGATGTCTTTATTTGGAGTGATAGTTTGAAATCATATTAAATCATATCTTTGTAATGACTAAGGGACTGGGAAGAATTCCATACACATTTTGTACTTCATTATAACTGTTATAAACTGTAAtaaaattatgtattttaataattgttacagaTCAGCTGCTGTGTAAAGTCAAGAGTTGTAATCTGGCTAACAATAAACAAAGTATACCAAAAA

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction
ko04657 IL-17 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU156400 False 778 TUCP 0.47 4 19017058 19018726
XM_039816472.1 True 4770 mRNA 0.46 32 19017039 19052242

Neighbor

gene id symbol gene type direction distance location
LOC120568749 NA coding upstream 3042 18988689 ~ 19013997 (+)
LOC120568750 NA coding upstream 32163 18969309 ~ 18984876 (+)
si:ch211-106h4.9 LOC103360860 coding upstream 96996 18868082 ~ 18920043 (+)
e2f5 LOC100699665,LOC102779743 coding upstream 184000 18821096 ~ 18833039 (+)
lrrcc1 lrrcc1 coding upstream 196653 18803651 ~ 18820386 (+)
LOC120568752 NA coding downstream 15208 19067450 ~ 19104441 (+)
clul1 LOC103361571 coding downstream 167963 19220205 ~ 19226563 (+)
adcyap1b prp/pacap,LOC104943411,LOC108232947,LOC103135685 coding downstream 207953 19260195 ~ 19266270 (+)
myl12.2 LOC107098295,LOC102237517,LOC103361564,LOC101069867,LOC103135689,LOC103479826 coding downstream 458144 19510386 ~ 19513462 (+)
trnar-ucu_13 NA coding downstream 464611 19516853 ~ 19516945 (+)
G115971 NA non-coding upstream 31106 18985728 ~ 18985933 (+)
G115934 NA non-coding upstream 83127 18931926 ~ 18933912 (+)
G115931 NA non-coding upstream 93869 18922753 ~ 18923170 (+)
G115923 NA non-coding upstream 150905 18865126 ~ 18866134 (+)
G115921 NA non-coding upstream 174245 18842572 ~ 18842794 (+)
G116042 NA non-coding downstream 114273 19166515 ~ 19168570 (+)
G116044 NA non-coding downstream 120816 19173058 ~ 19174369 (+)
LOC120568775 NA non-coding downstream 299847 19352089 ~ 19354967 (+)
LOC120568772 NA non-coding downstream 315238 19367480 ~ 19373820 (+)
G116104 NA non-coding downstream 434705 19486947 ~ 19487610 (+)
LOC120568911 NA other upstream 291592 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 342899 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 414776 18566633 ~ 18602263 (+)
G115729 NA other upstream 662695 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 987144 18027280 ~ 18029895 (+)
emilin2a NA other downstream 394769 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1320985 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 1830375 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 2818711 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 3555807 22608049 ~ 22620131 (+)

Expression


Co-expression Network