G116050


Basic Information

Item Value
gene id G116050
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19166515 ~ 19168530 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156479
CAATTACTATTTGATCAAGTGtgatatacacacatgcattccTTCACATCACCCCTCAACATGCCCACTCAAGCTACACACAGGGTACACAAACGCACTACAGGCAGGTGTACAGCAGCGGAGACACACCACTTGGTTCACACATCCTCATCCGTGTATGATAATTTACCTCCACTCACACACTAATATACCACAGCCTTCTCACCCACTTAAAGCAACTACAGTGCTAATCGTGTCACAAAAAAGGGGCGTCAACTTACATTTcaccttactttctttttttatcagaaAAAAGACTTAGCAATGCTAAAAACGTTGAGTTACTACATTCTGTATATGTGGTCAACTTTTAGAAGTACTGAAAACTGAAGCCACTTTGTTTTTTGGAGGGAAAAAGAAACCAGAGGAATTGAAGCATGCACATGACTCTTGTATATACTGTAATGAACTAGTAGTGAAGCCACATGATGACCTCATGGGTGGGCTGGATGTTAGCACAGCTCCAAGTGTTTCTCTCAGCCTTAAAGGTGAACTCTGCAGTCACGATGTCCCTGCTGAACTAAAGGTGTAAAAGCCAAAGAGaaaagtgaagaagaaaaaaaacgccaGATAACAAGATTTTTCTTTTGATTCTTTTCTTAAGATTGACTCTTAACGTCATACTGCAGAGTTTTCCTTTTCAAAATGAGCAGCTCTTGATCCTTGTTGGTGGATGTAGGGTCTGCTTTGTCTCTATTCCGGGGCTGTACTAACATACTACAGACTCGGCTACTAAAGGGCAAACTGAACTGCCCCAGTGTCTTTAAAGCATCTCTTTAGTCAGTGTTAAAACGTGAATactatgttatttttttgtagtgcattttaatttatgttttgATTATTGTTATGCTATTTTATATGAAGAAGCAGTGCAGGATGTATGTATTCAGAGAAAAGCGTAATATGTGATATTCTGCCTAACTTAGTTGTATATTTAAGTTGCTCACATGAGAACGTTTTCTCAGTGTTTGATACATGCTTATTGTACTGTAGGGTCAAATGGATGGTAATGTGAAAAACTGATCTAACCTCCCCATGCATTTCAAACCTATCCTTTTCTCAGAGCTGTCTAACACTAAAACAAATTCTACCTGAAGCAGAACTGAAATACAGTTTTATGATTCTGGAATGCACAGTCGGGATTTGTAAAACACCTCTTTCTCAAGGTTTCGCTAAAAGTTACCATGACTCTTTTAAGTTGAAATATTGTAGAAAGTCTACTTCTCATATTATACTTTACATACTCTTCCATGGCTTCTACGTGTTCTAAGTCTTTAGGAAAAAGTTGATGTTGAAGAATACTGACTGGATTGCAAAAACACAGATGAAACGGGGAAATTATTTATCCGTTGTCTTATATTGAACGATGCTACATGAAGGAATTATGAAGCAGTTTTTAATATGATGAAGTACATTTTCCAGTTGCGGGACAAATTGGTGTGTTATATTTGTCATTTCAATTTCTCTTGAGATACTAGAATTGTGCTCCTCTGTGCCACCGTAAGAATACAAGACAACCCACAACTTGAGCCTTGGTACCGGGGACTTTGCATACGTGAAGCCATTTAATTCTCCAGAACTTGATTTTTATCATTAACATACTTGATTTGAAAGATAAGAAATATTTGATGCCTTTAACTAAGTGCAAGAGTGAAATAGTGTTAATCTGTTGGATCAAAGAGGGCTgaaaatatcaaatatataaaaaaaaatagtagctATTCTGGGACCATAGGACCAGGAGCCAGTTAATCATCACACATCATCCAAATTTAAAATCTTATTGCACCATAGCGTTGGACTGCAGCCCCGATCTAACTTTATTGCACAGGAGTGAGATGCTGcctgtttttaagttttaaaaccTCATTATTGTAAAGGTTATGTCTGAACTTGTATCCTGATGTTTGTATGTATTCTTTTAACCATACTTATTAATTGGTATTCACAATAAAACCAGGCCAAATGTACAGA
>TU156480
ttccTTCACATCACCCCTCAACATGCCCACTCAAGCTACACACAGGGTACACAAACGCACTACAGGCAGGTGTACAGCAGCGGAGACACACCACTTGGTTCACACATCCTCATCCGTGTATGATAATTTACCTCCACTCACACACTAATATACCACAGCCTTCTCACCCACTTAAAGCAACTACAGTGCTAATCGTGTCACAAAAAAGGGGCGTCAACTTACATTTcaccttactttctttttttatcagaaAAAAGACTTAGCAATGCTAAAAACGTTGAGTTACTACATTCTGTATATGTGGTCAACTTTTAGAAGTACTGAAAACTGAAGCCACTTTGTTTTTTGGAGGGAAAAAGAAACCAGAGGAATTGAAGCATGCACATGACTCTTGTATATACTGTAATGAACTAGTAGTGAAGCCACATGATGACCTCATGGGTGGGCTGGATGTTAGCACAGCTCCAAGTGTTTCTCTCAGCCTTAAAGGTGAACTCTGCAGTCACGATGTCCCTGCTGAACTAAAGGTGTAAAAGCCAAAGAGaaaagtgaagaagaaaaaaaacgccaGATAACAAGATTTTTCTTTTGATTCTTTTCTTAAGATTGACTCTTAACGTCATACTGCAGAGTTTTCCTTTTCAAAATGAGCAGCTCTTGATCCTTGTTGGTGGATGTAGGGTCTGCTTTGTCTCTATTCCGGGGCTGTACTAACATACTACAGACTCGGCTACTAAAGGGCAAACTGAACTGCCCCAGTGTCTTTAAAGCATCTCTTTAGTCAGTGTTAAAACGTGAATactatgttatttttttgtagtgcattttaatttatgttttgATTATTGTTATGCTATTTTATATGAAGAAGCAGTGCAGGATGTATGTATTCAGAGAAAAGCGTAATATGTGATATTCTGCCTAACTTAGTTGTATATTTAAGTTGCTCACATGAGAACGTTTTCTCAGTGTTTGATACATGCTTATTGTACTGTAGGGTCAAATGGATGGTAATGTGAAAAACTGATCTAACCTCCCCATGCATTTCAAACCTATCCTTTTCTCAGAGCTGTCTAACACTAAAACAAATTCTACCTGAAGCAGAACTGAAATACAGTTTTATGATTCTGGAATGCACAGTCGGGATTTGTAAAACACCTCTTTCTCAAGGTTTCGCTAAAAGTTACCATGACTCTTTTAAGTTGAAATATTGTAGAAAGTCTACTTCTCATATTATACTTTACATACTCTTCCATGGCTTCTACGTGTTCTAAGTCTTTAGGAAAAAGTTGATGTTGAAGAATACTGACTGGATTGCAAAAACACAGATGAAACGGGGAAATTATTTATCCGTTGTCTTATATTGAACGATGCTACATGAAGGAATTATGAAGCAGTTTTTAATATGATGAAGTACATTTTCCAGTTGCGGGACAAATTGGTGTGTTATATTTGTCATTTCAATTTCTCTTGAGATACTAGAATTGTGCTCCTCTGTGCCACCGTAAGAATACAAGACAACCCACAACTTGAGCCTTGGTACCGGGGACTTTGCATACGTGAAGCCATTTAATTCTCCAGAACTTGATTTTTATCATTAACATACTTGATTTGAAAGATAAGAAATATTTGATGCCTTTAACTAAGTGCAAGAGTGAAATAGTGTTAATCTGTTGGATCAAAGAGGGCTgaaaatatcaaatatataaaaaaaaatagtagctATTCTGGGACCATAGGACCAGGAGCCAGTTAATCATCACACATCATCCAAATTTAAAATCTTATTGCACCATAGCGTTGGACTGCAGCCCCGATCTAACTTTATTGCACAGGAGTGAGATGCTGcctgtttttaagttttaaaaccTCATTATTGTAAAGGTTATGTCTGAACTTGTATCCTGATGTTTGTATGTATTCTTTTAACCATACTTATTAATTGGTATTCACAATAAAACCAGGCCAAATGTACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156479 True 2016 lncRNA 0.37 1 19166515 19168530
TU156480 False 1978 lncRNA 0.37 1 19166515 19168492

Neighbor

gene id symbol gene type direction distance location
si:dkey-32m20.1 NA coding downstream 372 19160906 ~ 19166143 (-)
LOC120568757 LOC103360862,LOC102206787,LOC102301563 coding downstream 39320 19119142 ~ 19127195 (-)
LOC120568598 NA coding downstream 199740 18963255 ~ 18966775 (-)
si:ch211-106h4.4 NA coding downstream 205148 18937382 ~ 18961367 (-)
si:ch211-106h4.6 plxdc2,LOC103360851 coding downstream 236131 18919199 ~ 18930384 (-)
stam stam coding upstream 93 19168623 ~ 19181368 (-)
colec12 LOC104926162,LOC103361572 coding upstream 13652 19182182 ~ 19216250 (-)
yes1 LOC104926159,LOC103361570,LOC101479012 coding upstream 58307 19226837 ~ 19255535 (-)
lpin2 LOC103361566 coding upstream 297422 19465952 ~ 19485956 (-)
myom1a LOC103361565 coding upstream 318161 19486691 ~ 19509566 (-)
G116034 NA non-coding downstream 19740 19130548 ~ 19146775 (-)
LOC120568774 NA non-coding downstream 51167 19045675 ~ 19115348 (-)
G116027 NA non-coding downstream 65602 19099802 ~ 19100913 (-)
LOC120568773 NA non-coding downstream 102824 19062277 ~ 19063691 (-)
G115969 NA non-coding downstream 181640 18982304 ~ 18984875 (-)
G116080 NA non-coding upstream 52185 19220715 ~ 19221643 (-)
G116085 NA non-coding upstream 54733 19223263 ~ 19223489 (-)
G116082 NA non-coding upstream 55298 19223828 ~ 19224080 (-)
G116091 NA non-coding upstream 241519 19410049 ~ 19410276 (-)
G116182 NA non-coding upstream 438135 19606665 ~ 19617420 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 231024 18931974 ~ 18935491 (-)
G115941 NA other downstream 320238 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 445928 18703064 ~ 18720587 (-)
sppl2 sppl2b other downstream 672027 18480670 ~ 18494488 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 1108356 18052984 ~ 18058159 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 53261 19221791 ~ 19222726 (-)
G116138 NA other upstream 296170 19464700 ~ 19465380 (-)
xcr1b.1 NA other upstream 624812 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1816271 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1839518 21008048 ~ 21010576 (-)

Expression


Co-expression Network