G116082


Basic Information

Item Value
gene id G116082
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19223828 ~ 19224080 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156515
CCGGCTGGGGTCGTAGGGATCAGCGGTGGTCTCCTCCGTCAGGATGTCGCTGTCGTTCAGAAAGGCCCTCTGGAGGACTTTGTCCAGTCTGCTGCTCATCCTGGAGACTAGGGCGACGCTGCGGTTCACCAGCAAGCCCACCCTGCTGGTCAGACGGTTGAAGGAATCCTCGATGCGGTCAATCTCAGTGGCGGTTTGGTCAGGGCCCTGATTCACCAGGATGTCCTCTGCATCCATGCGAGGCTCACGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156515 True 253 lncRNA 0.61 1 19223828 19224080

Neighbor

gene id symbol gene type direction distance location
colec12 LOC104926162,LOC103361572 coding downstream 7578 19182182 ~ 19216250 (-)
stam stam coding downstream 42460 19168623 ~ 19181368 (-)
si:dkey-32m20.1 NA coding downstream 57685 19160906 ~ 19166143 (-)
LOC120568757 LOC103360862,LOC102206787,LOC102301563 coding downstream 96633 19119142 ~ 19127195 (-)
LOC120568598 NA coding downstream 257053 18963255 ~ 18966775 (-)
yes1 LOC104926159,LOC103361570,LOC101479012 coding upstream 2757 19226837 ~ 19255535 (-)
lpin2 LOC103361566 coding upstream 241872 19465952 ~ 19485956 (-)
myom1a LOC103361565 coding upstream 262611 19486691 ~ 19509566 (-)
bag1 bag1,LOC102796959 coding upstream 289463 19513543 ~ 19516574 (-)
chmp5a chmp5,LOC103361429,LOC101475708 coding upstream 295456 19519536 ~ 19524482 (-)
G116085 NA non-coding downstream 339 19223263 ~ 19223489 (-)
G116080 NA non-coding downstream 2185 19220715 ~ 19221643 (-)
G116050 NA non-coding downstream 55298 19166515 ~ 19168530 (-)
G116034 NA non-coding downstream 77053 19130548 ~ 19146775 (-)
G116027 NA non-coding downstream 122915 19099802 ~ 19100913 (-)
G116091 NA non-coding upstream 185969 19410049 ~ 19410276 (-)
G116182 NA non-coding upstream 382585 19606665 ~ 19617420 (-)
LOC120568771 NA non-coding upstream 407417 19631497 ~ 19632872 (-)
G116180 vim,LOC107098299 non-coding upstream 415446 19639526 ~ 19640657 (-)
G116181 NA non-coding upstream 421242 19645322 ~ 19648123 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1102 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 288337 18931974 ~ 18935491 (-)
G115941 NA other downstream 377551 18844905 ~ 18846277 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other downstream 503241 18703064 ~ 18720587 (-)
sppl2 sppl2b other downstream 729340 18480670 ~ 18494488 (-)
G116138 NA other upstream 240620 19464700 ~ 19465380 (-)
xcr1b.1 NA other upstream 569262 19793342 ~ 19795759 (-)
tmie tmie,LOC102776014 other upstream 1760721 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 1783968 21008048 ~ 21010576 (-)
G116969 NA other upstream 3037918 22261998 ~ 22268559 (-)

Expression


Co-expression Network