emilin2a


Basic Information

Item Value
gene id emilin2a
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19447011 ~ 19465381 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156526
TATTTAATACAAATATGACCACAAGCCACACTTTGTTAGCTTCATTAGGCCTGGATCTTTTTTCTTCCTCATACCATGTATTTTGTTCTTTAAACATACTTTAAACCACATTTCCATACAAATCAAACACAGCATACACTAGGTATTCCTGTTGGTCAGACACAATCAAATAGCAAGCGGTACCTCCAAACAGAATGAAACAAACAGTCTCACAAAAGTTCAGACACTTtataagaaataaaagaaaaaggcatCGAAGACAGAAGAATGTGATGATCAGCAGATCATTTGCCAGCAACagaacaaacatatatatacacacacacacactacatatcCCAGGATCATAGAGAACGAAGTGTGATTCTTCACACACAAGATGCTTTACTTTCATAGAAAGAATGGAATTCATTTTGTTAATCATAAGATATACATCTATTTGACTTTACCAAACAAGCAAATAAATCAAAGCAAAACACACATCTTAATCATCACAAAAAACATATGCGCTACATAGTGAATGCGTAAACACATCAGCGAAATAATGACGATAATAGTGACAATCTAGCCATGATCGTAAATTGTGCTTTTTGTTCCATTAAATGGTTTTCGGCTGTTAAGTCTCTGTCCAACTCTCTTCTGATTTTGAATCCTCAATAGCACAGATactactatttatttt
>XM_039816440.1
GTGGACTTCCCCCAACTTGGAGTTTAATCAGTCACTGGAGCAATGTGACTGTGGTGTTTGGGAACGTCGCGCATGATAATAACAGAGTGGCCCTCTTTTTCTATGTTAGGGATATTTATTTTAAGGCGTTTGTTAAGTATGAATTACAGGAGTGGAGAGATGGACTGGCGGTGGACAGTTTTCACACTGTTTTTGAACTTTCAGTTCACTTACGGGTCTCCCTCCTCTTATGACTTGTTCCAAGGGTCTGCATACACTGGAGtggtacacagacacagaaacagGAACTGGTGTGCCTATGTGGTGCGCAGGAACGTTAGCTGCGCCGTGCAGGGGAGTGTGGAGAGCTTCCAGGAGCCCGTAGTGGCCCCCTGCCCAGCTTACCAGACTGACTGCCAGCAACAAGTGACATACCAAAATCGGTTTCGTCCCACGTACAAGATTGCCTTCAAAACAGTCACAGAGTTGGAGTGGAGATGCTGTCCTGGTTACCAAGGTCTGGACTGTAAAGACGTAAAACCACCCCTAAACCGACAAACCGTTCAGGGAACACAGCCTTTCCTCCCACCAAATCCTGGATAtacaaccagacacacacagaGGCCAGAGCGGAGAGAGACAGGGCACCATGAGACAAGGCATGGTGGGACAGATAAGGTGCGTCTTCTGGAAGGTGAAGTTCAGCGTCTGTCTCAGACAGTCCTTGATCTCCAGTCTGCTTTGACAGGGTTAACGGCCAACCTCCGCACAGAGCTGCAGGAAGACACAAAGAAGATACTGGTGACACTTCTTAACAACATGCATCCGCCAGACAGTGCTACAGTTGTAGGCACAGAGGAGAGCGCGGCAGTGCTGGATGGTCATCAGGCTACTAAAGGTGGGATGGCTGGAGACAACGCTATAGAAAAAATAGTGATCCGGTTGGACGATATCAACAATGAACTGAAAAGCAACGGTGAAGCTCTGGAAGACCTTAAAGGAACCATGACAAGTCATGAGGGGCAGATCCGTGTCCTGATGGATGCCTCTCAATCTCAGACTCCAGCCATAGCAGAGTTTGATGTTATACAGACCTACGTTGATGGAAAAATTGAGAAGATGAAGAAGGAGCTAGACCAGAATGTGGAGGAACAGATGGCCAAGCTGCAAAGCTCATGTAATGACAAAATCAAGACCTGTGAAGACAACCGTGATCAAGGTTTGGCTAGTCTGACCAAGCTGGTAGATACCAAAGAAGCTGATCTGAGAAAGGAGATCCGAGCACTACGTCTGGACATGGCTGCTGCAGATGGACCTGTACGAACTCAAAGGCAGACAGATCCATTTAAAGTGGAAGAGGATCGGAGTGACCACAAAGACCTCTGGCGTGAGATTGACCGTATTGCAGAGGCTCACCGCATCCTGAATGTCCGCATTGACAACGAGCTAGCGCACCTGTCTGCACCTCAGGAAGACAATGATTTCAATCTAATGGTGGAAGAGCTGGAAGCACGCATTAATATCACAGAGCAAAATGCAGAGACTCACTGTTTCTATATTGAAGAGAAGCTGACCCGTACGATTTCCGACAAAGTGGCAGAACTCCGGCAGCTTCTGGAGGAGCGTCTGAGCGGCATGGACGACCAGTTAACAAACATGCTGGTGGAAATGAGCAATAACTCCTTCCCTGGGATGTCCAGTGACTCCATGGATGCCATCCGGACAGAAGTCAACAACAATAAGTTCCTCCTACAAGGCTTGGATGATAAGGTAAATGCTGTTGGAGAGTTGTGCTCTGCAGGATGTTCAGGCTCAGGAATTAGTGTAGGTGCAGTGAGTTCATCACCCACACCTAAAGGTCTAGAAAACATTTTGAAGGACCTGAGTCGATATAGGAATGACTTGGACGTTCTTCACACAGATGTCAGGGCCAACACGGACAAGCTCAGGCAACTGGAGGACATCGTTGGAAGGGAGTCAGTCGCAAATGAGGGACGTGTCAAGACGATGGAGGACTTCAAGAAGGGATTGATTAATCTCCAAGATAATGTGCTTGGTCTGGCTGGTGCTGTTACCGGGTTAAGTGACTCCATAAGCAAATACAACCAGGATATGCTCCGAATAAACTCGACATGCTGCCATGCAAAGCAGAATGGCACTGGGAGTCCAGCAGTACTCAGTAGCCAGGCAGATGACACCAGGCGTCAGGTGGAGGAGCTGGGCAACAGACTTGATACGCTCAGTAGGCAGGTGTCATCTGAACTGAGTCAATGTAGACAGAATACACAGGGTGTTTCTGATGGCATCTCTGCTGTGAATGGACGTGTGACCAGACTTGAAAAGGTGTGTGGAAGGCTAGATGGGGTTTCGGCTAATATCAGGGAGCTGAAAGATGGACTTGACAGACATGTTGGTGGTCTGCGGGACTGTGTGTACAGGATGAACGTCACCTGTGGAAACCACGGCGCAGACATCACTGCACTGCAGAATTCCTTGCAGAGGTTCCATGCACAGCTGTCTGCGATGGCCAAACACGTATTGAAAGACGTCACCGCCAAAGAGCCAGGAATGACATTAAGACCAGAGAGGCCTGCTATTGTGCCAGATTTGACTCAGCCCAGTAGCAGAATCCAACAAATCCACATCCCTCTCATAATCCCACCGCCGCCATCCAACCCCAGGCAGCCGTCCAGACCCCGCCAACCAGGCCACCCCACTGTTCCCTTGGTTCCCAAAAGGCCGGTGGTGGAAACGGGTGAGGCAGGACCTCCAGGGTACAGCCGCAGGGTGACTGTGCGGAGAGGGTCTGAAGACTCGTCCAGCATGCCTGTCAAAGGATTTGCTGGAGCGCCAGGTTATCCTCCTCTGCAGCCTGTGTTTTTCAAGCCTATATCAACCAGCCACCAAGTTCCCATAGCAGCAAAGATACCCTGGAACCCGATGCATCACGCTCCAGTTGAAGCTCCAGTTTCAGCCGACAACAGCGCCTTCGCAGATCCCTTCTCCTTCTCTGCTGGCCTCACACAGCAGCCGCTCTCTGGAGACTTTGGCTTCATCCGCTTCAACAGAGTTCTAGTCAATGACGGAGGACACTACAATCCCCACACAGGGATCTTCACTGTACCTCTGGATGGACGATACCTGATTTCAGGGCTGCTGACTCCAAAGCAGGGTGACCGCGTGGAGGCCGTCCTGTCCGTGTCTAACCGCAGCATCCAGAGGCTGCAGAGCTCAGTGGGGCCTGTGGCTGGCCAACACGGGGGCTCGGCTGCTGCGAACTGCGGCTGCGGAGGCTCGGTGTCCTTCAGTCTGATCGTGCCCCTGAGGAAAGGAGACCGCGTGGGCCTGGTGAGGACCGGAGGCCAGCTGGCCACCACCGGGGCCAGGGAGATCCTCTCCACCTACGGCGCCATCTTCCTGTACGCACCACAGGCCAAAAGATAGCTGGAGCTCAGCTGGGCCAGTAAGAGCAAGGACTAGTTTGTTCCCAGATAGTTGGACTGGAGGAATTGAAGAAACCAGTTTTCACTGATCTGGAAACAGTGCCACTGTGTGAAGATCCTCCCTTATAAATTCAGTTAGGAAGTCCTGACATTGCAAGTGGTAAGCTATTTGCCAAATATACCTGAATACAATAAGCAGGATTTCTTTCTAATATATTTGATTATCGAGTTGCCTTCTTGTACCTATTGTGGATGTCTTGTGTAAATAAGTGTTTATaaattaacattaaaaaaataaataaatcccgTAATTATTTTAACAAAACCATCTCAGATACTCAATAGACCGTATGGTCAACATATCAGCAGAATATGATATTGTTGGTAAGACGATGAACCATGATAAATCAAAGTATAAGCTCATTTCATCTTACTCTGTAATGTGTACTGTAGAAGGAGAGAATGATGATTAATAAACACATGTGAAGAGACTGATGTGGAAAAAGCATGAAGGTTTAGCATTGCAATAAGGTTTTATGTTAAAAACTTGTCTGGCTTCAGAAACAGCACTGAAAAGGTTAGAAGGCAAAACCCCCATTTGGGTCATTACGTAAAGTGGGTGTGGATGAAAACTAAATTTCCCTTTTACCTCACTCCTGAGACTTCAAATATTCCAACAGAAAACTGTAAGAACCAGCAAGAGTGTATTTAGCCTTCCGTTCAGACTCCATTAACCTttaaagaagagaaaaataCTGATTTCTATTTGAAATTATTCAGTGAACTgttatttgattattatttttttaaagtggaatTAGCCAAGGTATTTAAACTGCATAATCTAGTTCATGTATTGCAACTTAAAAAATAAGCAAGAGGGCAAAAGTTACTTCTCTAGCCTGTAGTTACGGTTGACCTTTAACTCTGGAGACAAGAAAAATGcagcacacatacatgtatTCACTTAGAAACTTTATTTAATACAAATATGACCACAAGCCACACTTTGTTAGCTTCATTAGGCCTGGATCTTTTTTCTTCCTCATACCATGTATTTTGTTCTTTAAACATACTTTAAACCACATTTCCATACAAATCAAACACAGCATACACTAGGTATTCCTGTTGGTCAGACACAATCAAATAGCAAGCGGTACCTCCAAACAGAATGAAACAAACAGTCTCACAAAAGTTCAGACACTTtataagaaataaaagaaaaaggcatCGAAGACAGAAGAATGTGATGATCAGCAGATCATTTGCCAGCAACagaacaaacatatatatacacacacacacactacatatcCCAGGATCATAGAGAACGAAGTGTGATTCTTCACACACAAGATGCTTTACTTTCATAGAAAGAATGGAATTCATTTTGTTAATCATAAGATATACATCTATTTGACTTTACCAAACAAGCAAATAAATCAAAGCAAAACACACATCTTAATCATCACAAAAAACATATGCGCTACATAGTGAATGCGTAAACACATCAGCGAAATAATGACGATAATAGTGACAATCTAGCCATGATCGTAAATTGTGCTTTTTGTTCCATTAAATGGTTTTCGGCT

Function

NR:

description
EMILIN-2-like

GO: NA

KEGG:

id description
K24246 EMILIN; emilin

RNA

RNA id representative length rna type GC content exon number start site end site
TU156526 False 682 lncRNA 0.34 1 19464700 19465381
XM_039816440.1 True 5014 mRNA 0.46 9 19447011 19465314

Neighbor

gene id symbol gene type direction distance location
adcyap1b prp/pacap,LOC104943411,LOC108232947,LOC103135685 coding upstream 180741 19260195 ~ 19266270 (+)
clul1 LOC103361571 coding upstream 220448 19220205 ~ 19226563 (+)
LOC120568752 NA coding upstream 342570 19067450 ~ 19104441 (+)
LOC120568749 NA coding upstream 433014 18988689 ~ 19013997 (+)
LOC120568750 NA coding upstream 462135 18969309 ~ 18984876 (+)
myl12.2 LOC107098295,LOC102237517,LOC103361564,LOC101069867,LOC103135689,LOC103479826 coding downstream 45005 19510386 ~ 19513462 (+)
trnar-ucu_13 NA coding downstream 51472 19516853 ~ 19516945 (+)
rgs20 rgs20,LOC103361426,LOC100710193,LOC102795665,LOC101473767,LOC107098286,LOC104917737 coding downstream 113736 19579117 ~ 19592564 (+)
LOC120568599 LOC107383795 coding downstream 138263 19603644 ~ 19615854 (+)
LOC120568742 vim coding downstream 174127 19639508 ~ 19646524 (+)
LOC120568772 NA non-coding upstream 73191 19367480 ~ 19373820 (+)
LOC120568775 NA non-coding upstream 92044 19352089 ~ 19354967 (+)
G116044 NA non-coding upstream 272642 19173058 ~ 19174369 (+)
G116042 NA non-coding upstream 278441 19166515 ~ 19168570 (+)
G115971 NA non-coding upstream 461078 18985728 ~ 18985933 (+)
G116104 NA non-coding downstream 21566 19486947 ~ 19487610 (+)
G116105 NA non-coding downstream 23317 19488698 ~ 19490213 (+)
G116106 NA non-coding downstream 25187 19490568 ~ 19491420 (+)
G116107 NA non-coding downstream 26245 19491626 ~ 19492329 (+)
G116108 NA non-coding downstream 27809 19493190 ~ 19494336 (+)
LOC120568770 NA other upstream 394769 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 721564 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 772871 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 844748 18566633 ~ 18602263 (+)
G115729 NA other upstream 1092667 18305149 ~ 18354344 (+)
LOC120567833 gbg5 other downstream 907846 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 1417236 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 2405572 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 3142668 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 3176129 22641510 ~ 22681293 (+)

Expression


Co-expression Network