G116106


Basic Information

Item Value
gene id G116106
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19490568 ~ 19491420 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156540
CTGCGTCTGTCAGATTGAAGGTGCTCTTATCTTTGCCTCTGTCGTCCCTCAGGATGACCCCGTAAATACCTGCATCCGCCTTGGAGATCTAGAGTTTAAGTAAAAGCAGCTTTAGTATCCTTGAGACAGCAAATAATTCCCTCCTAAATGAAACAGAGGGGAATACAGCATGTTGGGACACATAATAAGACAGTAGAACAGCCAGACAGAGACCAACTAAGCAGAAAAGGCAAGCTTTTCTCCTGCCCGGGATGCTGCAGGcgttaaaatgaaaacatgaaaacagtaAGACGAGGAGGACACATGGAGAAATTATAGGCGTAAACTTATGGCAGCAAAGATTATGTCCAGACTTTGGGTCTTGGTGGTGGGGGAACATCCTCTGCAGTtggcttttttcctttttctttcggTTTCTCCTGCTTAATAACCCACTGTGAATTAGACAGATAAGCCAGTTAATTGAAGTGCGATTGACAGGAGTGGCGATGGACAAGCCGCCTCTCCTTAGCTCATGCAATGACACCAACCCTCTCTTTATGAGTAATGTTTATACAGTTTCAATGTACAGGTACCTTGAAACATCAATTTAACTTAATTGGCACCAACACTGTCTGACAGACCACATGGATATCATTAAAAAAggacagctttaaaatgtttaagtaAATTGGCCAGAGAAGTTAAATTGAATATACTGTTAGAAATGAAGTGTATGAATTAATCACACAGATAAACCATATAATGTATTTACACTATATGGGCATAGATGTTGAAAAGCATGACCTATACGTGTATAATgtcaaaatatacagtacaggccaaaagtttggacacaccttctcattcaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156540 True 853 lncRNA 0.40 1 19490568 19491420

Neighbor

gene id symbol gene type direction distance location
adcyap1b prp/pacap,LOC104943411,LOC108232947,LOC103135685 coding upstream 224298 19260195 ~ 19266270 (+)
clul1 LOC103361571 coding upstream 264005 19220205 ~ 19226563 (+)
LOC120568752 NA coding upstream 386127 19067450 ~ 19104441 (+)
LOC120568749 NA coding upstream 476571 18988689 ~ 19013997 (+)
LOC120568750 NA coding upstream 505692 18969309 ~ 18984876 (+)
myl12.2 LOC107098295,LOC102237517,LOC103361564,LOC101069867,LOC103135689,LOC103479826 coding downstream 18966 19510386 ~ 19513462 (+)
trnar-ucu_13 NA coding downstream 25433 19516853 ~ 19516945 (+)
rgs20 rgs20,LOC103361426,LOC100710193,LOC102795665,LOC101473767,LOC107098286,LOC104917737 coding downstream 87697 19579117 ~ 19592564 (+)
LOC120568599 LOC107383795 coding downstream 112224 19603644 ~ 19615854 (+)
LOC120568742 vim coding downstream 148088 19639508 ~ 19646524 (+)
G116105 NA non-coding upstream 355 19488698 ~ 19490213 (+)
G116104 NA non-coding upstream 2958 19486947 ~ 19487610 (+)
LOC120568772 NA non-coding upstream 116748 19367480 ~ 19373820 (+)
LOC120568775 NA non-coding upstream 135601 19352089 ~ 19354967 (+)
G116044 NA non-coding upstream 316199 19173058 ~ 19174369 (+)
G116107 NA non-coding downstream 206 19491626 ~ 19492329 (+)
G116108 NA non-coding downstream 1770 19493190 ~ 19494336 (+)
G116109 NA non-coding downstream 3399 19494819 ~ 19495036 (+)
G116110 NA non-coding downstream 4156 19495576 ~ 19496099 (+)
G116111 NA non-coding downstream 4963 19496383 ~ 19497133 (+)
emilin2a NA other upstream 25187 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 438326 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 765121 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 816428 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 888305 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 881807 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 1391197 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 2379533 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 3116629 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 3150090 22641510 ~ 22681293 (+)

Expression


Co-expression Network