G116117


Basic Information

Item Value
gene id G116117
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 19515535 ~ 19516625 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156551
AAGGATGAAgaatatcaatatatatatattctagcGCACTTGGATGTGAAACAAAAGAGAGACCCACAGTCTACCTTTAAAGATGAGTTTCTGTGAAGTTTGAGGAACTCCAGTAGCTTGGGTGAGAGCATCTGCGAGGTCTTTGACAATGGGGCCCTTGCCATCAtcttggccagttaccgtgatGCTGTGCTTAGTTGATCCGTATGCAACTGTCACTGTTATCGTTTGATCTGACATTTTGGTTTTTAGCGTCCTTTTCACAACATGAATCACACGGCTAGCTCGGTTGCTCGCTACCTAGCTAACTACTTCCGGGACAGACAGGAAACAGTTATACTAACTTAATATTTTATAACTTTATATTTAACTTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156551 True 378 lncRNA 0.40 2 19515535 19516625

Neighbor

gene id symbol gene type direction distance location
myl12.2 LOC107098295,LOC102237517,LOC103361564,LOC101069867,LOC103135689,LOC103479826 coding upstream 2073 19510386 ~ 19513462 (+)
adcyap1b prp/pacap,LOC104943411,LOC108232947,LOC103135685 coding upstream 249265 19260195 ~ 19266270 (+)
clul1 LOC103361571 coding upstream 288972 19220205 ~ 19226563 (+)
LOC120568752 NA coding upstream 411094 19067450 ~ 19104441 (+)
LOC120568749 NA coding upstream 501538 18988689 ~ 19013997 (+)
trnar-ucu_13 NA coding downstream 228 19516853 ~ 19516945 (+)
rgs20 rgs20,LOC103361426,LOC100710193,LOC102795665,LOC101473767,LOC107098286,LOC104917737 coding downstream 62492 19579117 ~ 19592564 (+)
LOC120568599 LOC107383795 coding downstream 87019 19603644 ~ 19615854 (+)
LOC120568742 vim coding downstream 122883 19639508 ~ 19646524 (+)
pde1cb pde1c,LOC108232872,LOC103135697,LOC103479836,LOC102794047,LOC100712431,LOC103361422 coding downstream 131794 19648419 ~ 19751633 (+)
G116115 NA non-coding upstream 7394 19507899 ~ 19508141 (+)
G116114 LOC104962928 non-coding upstream 11702 19503129 ~ 19503833 (+)
G116113 NA non-coding upstream 14237 19500420 ~ 19501298 (+)
G116112 NA non-coding upstream 15460 19499876 ~ 19500075 (+)
G116111 NA non-coding upstream 18402 19496383 ~ 19497133 (+)
G116128 atp6v1h non-coding downstream 38162 19554787 ~ 19568018 (+)
LOC120568776 NA non-coding downstream 102604 19619229 ~ 19624184 (+)
G116168 NA non-coding downstream 110629 19627254 ~ 19627619 (+)
G116174 NA non-coding downstream 121253 19637878 ~ 19638123 (+)
G116175 NA non-coding downstream 121545 19638170 ~ 19638412 (+)
emilin2a NA other upstream 50154 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 463293 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 790088 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 841395 18660429 ~ 18674140 (+)
skila skil,LOC102782637 other upstream 913272 18566633 ~ 18602263 (+)
LOC120567833 gbg5 other downstream 856602 20373227 ~ 20375633 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 1365992 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 2354328 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 3091424 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 3124885 22641510 ~ 22681293 (+)

Expression


Co-expression Network