Gene
RNA
| Item | Value |
|---|---|
| gene id | G116368 |
| gene name | LOC101078271 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 20390357 ~ 20391720 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: alanine aminotransferase 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU156870 | True | 670 | lncRNA | 0.49 | 2 | 20390357 | 20391720 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120567661 | NA | coding | downstream | 39126 | 20348509 ~ 20351231 (-) |
| ift22 | ift22,LOC102787459 | coding | downstream | 50964 | 20336698 ~ 20339393 (-) |
| atp6v0b | atp6v0b,vato,LOC102788333 | coding | downstream | 171562 | 20208710 ~ 20218795 (-) |
| b4galt2 | b4galt2 | coding | downstream | 182863 | 20026059 ~ 20207494 (-) |
| LOC120567781 | NA | coding | downstream | 392276 | 19995533 ~ 19998081 (-) |
| pter | pter | coding | upstream | 17415 | 20409135 ~ 20415934 (-) |
| mmp16b | LOC103369336 | coding | upstream | 46747 | 20438467 ~ 20455878 (-) |
| cables1 | cables1 | coding | upstream | 141391 | 20533111 ~ 20558297 (-) |
| gata6 | gata6 | coding | upstream | 197064 | 20588784 ~ 20595162 (-) |
| mib1 | mib1 | coding | upstream | 228568 | 20620288 ~ 20675826 (-) |
| G116366 | NA | non-coding | downstream | 2295 | 20387498 ~ 20388062 (-) |
| G116328 | NA | non-coding | downstream | 64483 | 20325649 ~ 20325874 (-) |
| G116292 | LOC107655868,LOC106532782,LOC108241678 | non-coding | downstream | 452944 | 19924212 ~ 19937413 (-) |
| G116293 | NA | non-coding | downstream | 507948 | 19879905 ~ 19882409 (-) |
| G116274 | NA | non-coding | downstream | 638163 | 19745702 ~ 19752194 (-) |
| LOC120568747 | NA | non-coding | upstream | 188800 | 20580520 ~ 20585677 (-) |
| G116484 | rock1 | non-coding | upstream | 376915 | 20768635 ~ 20771028 (-) |
| G116499 | NA | non-coding | upstream | 414433 | 20806153 ~ 20806691 (-) |
| G116508 | NA | non-coding | upstream | 435792 | 20827512 ~ 20827711 (-) |
| G116525 | NA | non-coding | upstream | 527249 | 20918969 ~ 20919716 (-) |
| xcr1b.1 | NA | other | downstream | 594598 | 19793342 ~ 19795759 (-) |
| G116138 | NA | other | downstream | 924977 | 19464700 ~ 19465380 (-) |
| G116084 | LOC104943419,LOC103361571,LOC101479291 | other | downstream | 1167631 | 19221791 ~ 19222726 (-) |
| LOC120568972 | LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 | other | downstream | 1454866 | 18931974 ~ 18935491 (-) |
| G115941 | NA | other | downstream | 1544080 | 18844905 ~ 18846277 (-) |
| tmie | tmie,LOC102776014 | other | upstream | 593081 | 20984801 ~ 20995567 (-) |
| higd1a | higd1a | other | upstream | 616328 | 21008048 ~ 21010576 (-) |
| G116969 | NA | other | upstream | 1870278 | 22261998 ~ 22268559 (-) |
| LOC120569135 | ttc39c,LOC102790819 | other | upstream | 2953998 | 23345718 ~ 23361580 (-) |
| G117259 | vps4b | other | upstream | 3038646 | 23430366 ~ 23430992 (-) |
