G116464


Basic Information

Item Value
gene id G116464
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20693420 ~ 20696473 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156979
GCTCAAATGTCATTATGTTCACAGCCCACAAGCACAAAAATGAGGTAGATCACCCAGACACAAGGCTACCACTGGGCTGCACATGGTTATCAAACACATTTCAGTGACGATTGTGAGAgcaagttgcatattaagtgttcAATTTTTAAAAGGAAAGACACATTCTGTGGACCATTGGAGTTTAAGTTAATGTTTTGATCCCCAGTCTCATATTTGGACTCATTTTGGGGTTAATTCAATAGTGACAAACATGTCTTATTTGTCTTAACTTGTATTCTGCAAGTTCATATTTCCTACCCCTAATGACATTCAGTAGATCTAATAATCATTCATTTAGGTCTTGTGCAAAGCCTTCATGGATGGTTTTGAAGAGAAGAGGACACACTCCCTTGGTTTAGGGAAGCTTGCAATCGAATATTACACTTCAATATGATTATCAGTCCAAAATGCttgtcaaataaataagaatcCCTCATGGAcctgattttcattttcaataaaaatccaACACAAGAACAGGTAGGGATACAGACATTTGGTTAAGGACACATCTAGGTAGATTTTTTCTAGCCTTTGCAACATAACATAAAATGCAATAAGACATCATGATCAAAATATACTGGCAAAAGTTACACAAgactaaaaaaaacatcagtaacCCTCAGTGGTTAAGGGGatgatataatatattaataatgtaAACAACGCTTTAAACAGTACAGTAGTCCGAAATCCAATTATTTCATTGCGCTTCACTCAGACAAACAACATTTCTTCGCCTCACAAGTTAATGGTTTCTTCATTCTCATTGGTCCGAAAAAAATTAGTGACTTGAGCAGTGACTGTATGAAACGTCACTTAAGGCATATTCTTTGGACAACCCTGTgcagaaacataaaaacattctacTTTCAAGTATAGGGAATAATCTGGTCATCTGCTTTTGACAGTGTGTTACCCTTTCTTTGATTATCCTTTGGTTTGGGGGCAAGAGATGGCAGATTGAGAGTTTAATGTGTGGATGGTAGCCACAGTCAGCGTCAGAACATTGAAACAGGAGGTGAAAGCCCAGGCACAGTCCGCAGAAGGATATTTGGCAGTGAAGAGGCGTGCTTATTATACAGCATTTTACTGACGTAATGTGATTATGCTTAAAATACCCAGTATTCAAGTCAGTACATGCCTAAATACTAAACATATGTAATTTATGTTGCTCCGTCTGTGAGTTGTACAATAAAACCCTGTGGCAAGTCACATAAGTGTGTTCTGGACAACAGACCTGCTTCATAGTTACAGTTTATATTTCAGCCATAATAGAACATTATCATACTACATTCAAGGACAACTTGTACTTTTCTTTAGTTGTGAATAAAGTCTTTGGATAAATTAATGTGTCAGTCACTTAGAGACTAAAACCACACTCATACAGCTCCCCGTCAGAAGGATTATTAATGCCACATAAATATATTCAGAGGCacaagatagagagagagtccCATTTGCAGTTGAAATGATCGATGATGGAAATCCAATACAGGCCAAACTCTATGTTAATATTTCTTCAATGTAGTGAGCTGACTTGTCAATAAGCTTTGTGGAGTTTGAGAGGCATAGCAGGTAAGAAGGGACAAGAAAAGCGAAAGGAAAAGTCAAGGGGCAGCTGAGGATGCCTTTGGTGCCAGCATAAGTTAATGCCAAAAATACACGGTGAACTTGGAGAATAGCTTCGTCCCTTCAAGCAACCTTTAAAACCCTGAGATAAACATGTATGTCCAGAATGGGACACACAAAGTACATATGTACGGACACATACAATCTTCAAATTGTCACATCATTGATCTGAGAGCGTCCATTTTGGCGaacatcaaaacaaataaagtttcagctgtgctttttttCTACAGCAAATTCTTTTTCAGTAGAACACAAGTTCCAGTGGAGAGAAGCCCAGCTACAAGCAAGCGTTAAAACAAGCACTGACCCAGGCGTAGTGCACTGTGGCAGTACAGATTAAAGGAAAGCCATATTAGGTGGCCTTGTGTCCACTCGTGGGGCACTTTGGATCTTGTGATCCAGCATATCCCCTCTGACCTTCCATTGGAATGGCAAGAATTGTAATCGCTGGTTGGTTCGGAATTAAATCTAtcctcatttcggattgtgttTCTGCAGCAGAACAGTCGATCCAGGATGTTTCAGGTTCAAACATGGCGGCCAGTCAAAAAGTAGAGGGGCCGGTCCTCACTGCAGTTGGCCGTCTGAAACTCGTCACGCAGGCGGAACTGCCACTCGTCCTCCAGCTCCAATCTGATGACGGTCTGACGCAGGGAACTTCGGTCCTGGCAGATCACACAGAGAGTGGCGCCTTGAGGAAGCGGAATTTCTTGAGGAGTCCAGATACGACGAAAGAGTCACAAAGGTAAAGCAGGAGGCCACTGAACAGCAGGCCCTGATGGTTCAGGTTGGTGGAGTGTGGACGAGAGTTGATGTAGCAAACAAAAATCTGTGACAAAAGATATGACAAGATACACCTCATAAATTCCATGAAACATGAAGCGCATATCTTTCAGGTCACAATTAATGAAATAATCCTCATGAAACCTTGATAAATCCTCTGGGAAGCTATTGGCGACAAGCTAATTTATAGGTTGCATTTTGTGCATCATAATTTATTTCCATtacaggagaaaacacaagaaatgTGTCTAGGCATGCAAATAATTGAAGTTG

Function

NR:

description
phospholipid-transporting ATPase ID-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156979 True 2730 lncRNA 0.40 2 20693420 20696473

Neighbor

gene id symbol gene type direction distance location
abhd3 abhd3 coding upstream 3790 20677357 ~ 20689630 (+)
npc1 npc1 coding upstream 169881 20507410 ~ 20523539 (+)
egfra LOC103369338 coding upstream 189144 20461791 ~ 20504276 (+)
c1ql3b LOC108241646,LOC102783794,LOC101484294,LOC102201850,LOC103369334 coding upstream 284387 20407668 ~ 20409033 (+)
fuz fuz coding upstream 314113 20377158 ~ 20379307 (+)
rock1 rock1 coding downstream 44788 20741261 ~ 20779745 (+)
usp14 usp14,LOC102778130 coding downstream 85782 20782255 ~ 20792499 (+)
pth1r pth1r coding downstream 238962 20935435 ~ 20983609 (+)
LOC120567629 NA coding downstream 320429 21016902 ~ 21019325 (+)
gjc2 gjc2 coding downstream 330027 21026500 ~ 21045564 (+)
G116463 NA non-coding upstream 279 20692887 ~ 20693141 (+)
G116461 NA non-coding upstream 1435 20691619 ~ 20691985 (+)
LOC120567944 NA non-coding upstream 39270 20648605 ~ 20654150 (+)
G116327 NA non-coding upstream 370879 20322288 ~ 20322541 (+)
G116322 NA non-coding upstream 378149 20314888 ~ 20315271 (+)
G116465 NA non-coding downstream 431 20696904 ~ 20699209 (+)
G116507 NA non-coding downstream 131403 20827876 ~ 20828235 (+)
G116514 NA non-coding downstream 184219 20880692 ~ 20880996 (+)
G116529 NA non-coding downstream 252531 20949004 ~ 21028982 (+)
G116538 NA non-coding downstream 325158 21021631 ~ 21030496 (+)
LOC120567833 gbg5 other upstream 317787 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1228039 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 1641178 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 1967973 18720365 ~ 18725447 (+)
LOC120568691 NA other upstream 2019280 18660429 ~ 18674140 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other downstream 186144 20882617 ~ 20915322 (+)
LOC120568354 NA other downstream 1174480 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1911576 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1945037 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2737152 23433625 ~ 23440843 (+)

Expression


Co-expression Network