G116508


Basic Information

Item Value
gene id G116508
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20827512 ~ 20827711 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157030
gtttgaaattggtgtgtctcactgtcacacaagctacttcctggttgcggtgctggaagggaaatgtagtcaatcgctttacattggtaatggattgctgtgcacagcgtcgctatctaaaactacactcaatgttttcactttaggccaacatacacctttgtggttttgggttactggtttcatgtgtaacattgata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157030 True 200 lncRNA 0.42 1 20827512 20827711

Neighbor

gene id symbol gene type direction distance location
LOC120569019 aqp1,LOC103358082,LOC101079855,LOC104917699 coding downstream 9348 20815649 ~ 20818164 (-)
thoc1 thoc1 coding downstream 27967 20792744 ~ 20799545 (-)
greb1l NA coding downstream 87483 20693367 ~ 20740029 (-)
mib1 mib1 coding downstream 151686 20620288 ~ 20675826 (-)
gata6 gata6 coding downstream 232350 20588784 ~ 20595162 (-)
myl13 myl3,LOC105919861,LOC102217899,LOC107395748 coding upstream 92885 20920596 ~ 20923664 (-)
ccdc13 NA coding upstream 174269 21001980 ~ 21006127 (-)
jmjd4 jmjd4,LOC102786139 coding upstream 223628 21051339 ~ 21053776 (-)
wnt9a wnt9a,LOC106599874 coding upstream 305291 21133002 ~ 21151186 (-)
c11h1orf35 LOC104963886,LOC103374549 coding upstream 369582 21197293 ~ 21201627 (-)
G116499 NA non-coding downstream 20821 20806153 ~ 20806691 (-)
G116484 rock1 non-coding downstream 56484 20768635 ~ 20771028 (-)
LOC120568747 NA non-coding downstream 241835 20580520 ~ 20585677 (-)
G116368 LOC101078271 non-coding downstream 435792 20390357 ~ 20391720 (-)
G116366 NA non-coding downstream 439450 20387498 ~ 20388062 (-)
G116525 NA non-coding upstream 91258 20918969 ~ 20919716 (-)
G116580 NA non-coding upstream 230881 21058592 ~ 21061240 (-)
G116582 NA non-coding upstream 279803 21107514 ~ 21107718 (-)
G116651 NA non-coding upstream 381031 21208742 ~ 21209773 (-)
G116692 NA non-coding upstream 469704 21297415 ~ 21300082 (-)
xcr1b.1 NA other downstream 1031753 19793342 ~ 19795759 (-)
G116138 NA other downstream 1362132 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1604786 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 1892021 18931974 ~ 18935491 (-)
G115941 NA other downstream 1981235 18844905 ~ 18846277 (-)
tmie tmie,LOC102776014 other upstream 157090 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 180337 21008048 ~ 21010576 (-)
G116969 NA other upstream 1434287 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2518007 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 2602655 23430366 ~ 23430992 (-)

Expression


Co-expression Network