G116616


Basic Information

Item Value
gene id G116616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21243641 ~ 21244393 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157170
CCTTAATGTTAAGGCTGGCTGTGGTCTGCTggtctccacacacacagctgtagtCTCCACTGTCTTGTGGCACCACTTTGTTGATCAGGAGTTCATTCACAGAGGCCTTCTGCTTCATCTGGTACTTTTCTCCAGACTTCAGGACCTGTGTTCCCTTCTTCCACTCTACAGGGACTCCAGGTTTAGAGAGCTCACAATGCAGAGTAACACTTTCTCCCTCCTCAGCCTCCTGGCACTCCAGCTTCTGTTTGAACGTCACTGTTTGGGC

Function

GO: NA

KEGG:

id description
ko05410 Hypertrophic cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU157170 True 268 lncRNA 0.51 2 21243641 21244393

Neighbor

gene id symbol gene type direction distance location
guk1a guk1,LOC107100458 coding upstream 34957 21200717 ~ 21208684 (+)
arf1 arf1 coding upstream 47884 21192298 ~ 21195757 (+)
wnt3a wnt3a coding upstream 64810 21163720 ~ 21178831 (+)
snap47 snap47 coding upstream 183891 21053381 ~ 21059750 (+)
iba57 iba57 coding upstream 192299 21048354 ~ 21051342 (+)
abcb8 abcb8,LOC103375355,LOC102789860 coding downstream 40759 21285152 ~ 21290501 (+)
cdk5 cdk5,LOC106599847 coding downstream 47313 21291706 ~ 21298333 (+)
zgc:92591 LOC103479695,LOC101468538,LOC101063387,LOC100696317,LOC105935710,LOC106963471,LOC103358166 coding downstream 183626 21428019 ~ 21428679 (+)
asb10 asb10 coding downstream 190574 21434967 ~ 21439933 (+)
gbx1 gbx1 coding downstream 197367 21441760 ~ 21444125 (+)
G116583 wnt9a non-coding upstream 109629 21129608 ~ 21134012 (+)
G116538 NA non-coding upstream 213145 21021631 ~ 21030496 (+)
G116529 NA non-coding upstream 214659 20949004 ~ 21028982 (+)
G116514 NA non-coding upstream 362645 20880692 ~ 20880996 (+)
G116507 NA non-coding upstream 415406 20827876 ~ 20828235 (+)
G116657 NA non-coding downstream 26358 21270751 ~ 21326263 (+)
G116723 NA non-coding downstream 209937 21454330 ~ 21500394 (+)
G116746 NA non-coding downstream 369707 21614100 ~ 21662470 (+)
G116794 mapre2 non-coding downstream 590073 21834466 ~ 21838752 (+)
G116857 NA non-coding downstream 691126 21935519 ~ 22020278 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 328319 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 868008 20373227 ~ 20375633 (+)
emilin2a NA other upstream 1778260 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2191399 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 2518194 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 626560 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 1363656 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 1397117 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 2189232 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 2348339 23592732 ~ 23685804 (+)

Expression


Co-expression Network