G116794 (mapre2)


Basic Information

Item Value
gene id G116794
gene name mapre2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21834466 ~ 21838752 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157416
ATCCGAATCTCAACATCTTTCAAATAGCAGGTTAAACATACAAAAAGCTCACTTAACATACTggttttttattaaatatgtaAAAAGCAGGTCAAGTTATTCACAAATAAAATGCAAACATGCAACACGTTTTGTGGGGGAATGCATAATGAGTGggacatgaaaaaaacaaaacatttaccATTCATTAATTATTGACAGTACATGTTTACATTCCTTTTCAtttatacaataatatataactgAATCATTATGGTGCACTGCCCAGTTCAATATTAGTAAATGCAATATTAAGAAAGGGTATACAATGTACTTACTGGAATATAGCATGGCAAATTACTCAGTGAACTGACTCTCCCTAAGAcctgtggtttaaaaaaaaaaaaaaaaaaacacacatctgAAATCTGAACAGACCACAAGTTCCAGCTGAGGTTTAAAACTTAAAATGCTGCATTGTAATAAGACTAGTCCACAATAATGTTTCTTCCTTCCAAACGTTCATGGCATACCAAGTTAACTCTATTACCAAACCACTTTGTATGGTGTGAATAACACATTGTTGAGCACACTGATTATCTGAAATTTGTGAGGATAGTTGTCAAACAATCATAAGTTGCCATTATACTACATTTTATTCACAATTCATTGACTGTATTGCCCTCCTTCATGAGGCTGCAATGCAGAATCTCGCACTATTCCTAaggcttaataataataaatatggtGAGGGTCTATGGACAGATTGTCCAATACAGAGTCAAATGTCAGTGCAACATATGGAAGGAGGTTAAATAAGAGCTACTACGAGCCCTTTCAGGGCTTTGCTTATTGCATTCTTGTGATTAATATTGTTgatatgcaaaataaaaaactaaataaaattgaaaaaaggaCAGAAGCTGGGAAGTTAACACTTGCACTGACAGGTAACAGCTACCTGTCTAAACTTCAGCATTTCATAACGTCTACTGGAGGATTTGAATTGACTTTCCACCCACACAGTCCTTGGAAACTTCTGTGATGGTCTGAACGTGTTCTGCTGGTGAAGGTAGTCACCACAAACCTGCCACAGCCGTTCaccaaaagtcacaaaaaacatCAAACAGTGAGCAGAGggatacaaaaaataaaaaccggtGATGGTGCTTCTATTCAGGAGGTGGCTTCGTGTGCTCAGTCTTGGAGAGAACAAAAGAATAAAccatgaggaaaaaaaatgaaaatcctTTAACAGTTCTCACATATTAAAAAGAGGGGTCTGACTGCAGTGAGGGACGATGGCAGTCAGTATTCATCCTGTTCCTCCTGCTGATCATCTGGCGCCTCCTCATGGGCTTGCTGGTCCACTTCCTGTCCGTCACCCTCAGCCAGCTCTGCCCCTTCctgttCGTCTGAAGCATAAAGGACTTCCATTAGCCGTTCGACAAACGGGGCATTTTCTTCACCATGTTCCTGGCACAGCAGCTCCACCTCTCGCAGCTTGCTAAAGTAGTAgtccctctccttctccactCCTTCCAGTGCCGACTTTAATGTATTCATCTGCTCGGTTAGTTGTGTGACCTGTGCTTCCAGTTCTTTCTCTCCTTTGGCAGGAGCTGGTGTTGCAATTGCAGGGATCTTTTTGGCTGATGAGGGTCTGGATGTTGGTGTTGAGGACTTGGGGGTTGCAGAGCTCGACCTTGATGCTCCTGCAGTAGGGGAGCTGGCTGCATGTTGGGACTTCTTTGGCAGGTTGAAGATCTGCTCACCAGGGTCTGGTGGGGGAATGGCATCCTGACCCTGTCTGGCTGCAACTGGGTCATACTCTTTACCATCGTAATTGGCATCAAAGAACTTCTTAAACCACTGGATGAAATCGAGATTGTCTTGAAATCTGCCTTTAACCAGTTTCTCCACAGGAATAATCTGAAACAAGAAAGAGCGAAAAAGAGAATCT
>TU157417
ATCCGAATCTCAACATCTTTCAAATAGCAGGTTAAACATACAAAAAGCTCACTTAACATACTggttttttattaaatatgtaAAAAGCAGGTCAAGTTATTCACAAATAAAATGCAAACATGCAACACGTTTTGTGGGGGAATGCATAATGAGTGggacatgaaaaaaacaaaacatttaccATTCATTAATTATTGACAGTACATGTTTACATTCCTTTTCAtttatacaataatatataactgAATCATTATGGTGCACTGCCCAGTTCAATATTAGTAAATGCAATATTAAGAAAGGGTATACAATGTACTTACTGGAATATAGCATGGCAAATTACTCAGTGAACTGACTCTCCCTAAGAcctgtggtttaaaaaaaaaaaaaaaaaaacacacatctgAAATCTGAACAGACCACAAGTTCCAGCTGAGGTTTAAAACTTAAAATGCTGCATTGTAATAAGACTAGTCCACAATAATGTTTCTTCCTTCCAAACGTTCATGGCATACCAAGTTAACTCTATTACCAAACCACTTTGTATGGTGTGAATAACACATTGTTGAGCACACTGATTATCTGAAATTTGTGAGGATAGTTGTCAAACAATCATAAGTTGCCATTATACTACATTTTATTCACAATTCATTGACTGTATTGCCCTCCTTCATGAGGCTGCAATGCAGAATCTCGCACTATTCCTAaggcttaataataataaatatggtGAGGGTCTATGGACAGATTGTCCAATACAGAGTCAAATGTCAGTGCAACATATGGAAGGAGGTTAAATAAGAGCTACTACGAGCCCTTTCAGGGCTTTGCTTATTGCATTCTTGTGATTAATATTGTTgatatgcaaaataaaaaactaaataaaattgaaaaaaggaCAGAAGCTGGGAAGTTAACACTTGCACTGACAGGTAACAGCTACCTGTCTAAACTTCAGCATTTCATAACGTCTACTGGAGGATTTGAATTGACTTTCCACCCACACAGTCCTTGGAAACTTCTGTGATGGTCTGAACGTGTTCTGCTGGTGAAGGTAGTCACCACAAACCTGCCACAGCCGTTCaccaaaagtcacaaaaaacatCAAACAGTGAGCAGAGggatacaaaaaataaaaaccggtGATGGTGCTTCTATTCAGGAGGTGGCTTCGTGTGCTCAGTCTTGGAGAGAACAAAAGAATAAAccatgaggaaaaaaaatgaaaatcctTTAACAGTTCTCACATATTAAAAAGAGGGGTCTGACTGCAGTGAGGGACGATGGCAGTCAGTATTCATCCTGTTCCTCCTGCTGATCATCTGGCGCCTCCTCATGGGCTTGCTGGTCCACTTCCTGTCCGTCACCCTCAGCCAGCTCTGCCCCTTCctgttCGTCTGAAGCATAAAGGACTTCCATTAGCCGTTCGACAAACGGGGCATTTTCTTCACCATGTTCCTGGCACAGCAGCTCCACCTCTCGCAGCTTGCTAAAGTAGTAgtccctctccttctccactCCTTCCAGTGCCGACTTTAATGTATTCATctacaaatattaaattcaggattatttttagcatcaatatcaaaacacacaaaaatacgtGGGCTTTGGTTAGTG

Function

symbol description
mapre2 Predicted to enable microtubule plus-end binding activity. Acts upstream of or within embryonic cranial skeleton morphogenesis. Predicted to be located in cytoplasm and microtubule. Predicted to be active in microtubule cytoskeleton. Human ortholog(s) of this gene implicated in congenital symmetric circumferential skin creases 2. Orthologous to human MAPRE2 (microtubule associated protein RP/EB family member 2).

NR:

description
PREDICTED: microtubule-associated protein RP/EB family member 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157416 True 1942 lncRNA 0.41 4 21834466 21838752
TU157417 False 1620 lncRNA 0.38 2 21834466 21836347

Neighbor

gene id symbol gene type direction distance location
cebpd cebpd coding upstream 35612 21797438 ~ 21798854 (+)
snai2 snai2 coding upstream 124823 21707253 ~ 21709643 (+)
pcmtd1 pcmtd1 coding upstream 173958 21648818 ~ 21660508 (+)
st18 NA coding upstream 191970 21602052 ~ 21642496 (+)
rb1cc1 rb1cc1 coding upstream 239229 21581280 ~ 21595237 (+)
klhl14 klhl14,LOC102797134 coding downstream 60816 21899568 ~ 21916897 (+)
cacna1eb NA coding downstream 82899 21921651 ~ 21982046 (+)
LOC120568173 LOC103396305,LOC101065160,LOC103364109,LOC100698908,LOC104955975 coding downstream 144262 21983014 ~ 21987482 (+)
LOC120568175 LOC104935914,LOC104955993,LOC103364110,LOC100699175,LOC102214823 coding downstream 156848 21995600 ~ 22002864 (+)
znf830 znf830 coding downstream 177170 22015922 ~ 22017307 (+)
G116746 NA non-coding upstream 171996 21614100 ~ 21662470 (+)
G116723 NA non-coding upstream 334072 21454330 ~ 21500394 (+)
G116657 NA non-coding upstream 508203 21270751 ~ 21326263 (+)
G116616 NA non-coding upstream 590073 21243641 ~ 21244393 (+)
G116583 wnt9a non-coding upstream 700454 21129608 ~ 21134012 (+)
G116857 NA non-coding downstream 96767 21935519 ~ 22020278 (+)
LOC120568180 NA non-coding downstream 186361 22025113 ~ 22036950 (+)
LOC120568856 NA non-coding downstream 396067 22234819 ~ 22238505 (+)
LOC120568744 NA non-coding downstream 469015 22307767 ~ 22314947 (+)
G116978 NA non-coding downstream 626583 22465335 ~ 22472840 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 919144 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1458833 20373227 ~ 20375633 (+)
emilin2a NA other upstream 2369085 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2782224 19017039 ~ 19052242 (+)
LOC120568911 NA other upstream 3109019 18720365 ~ 18725447 (+)
LOC120568354 NA other downstream 32201 21870953 ~ 21897391 (+)
LOC120567968 NA other downstream 769297 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 802758 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 1594873 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 1753980 23592732 ~ 23685804 (+)

Expression


Co-expression Network