G116922


Basic Information

Item Value
gene id G116922
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22178293 ~ 22178534 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157587
attccccctagagcaagcagtgcgacagtggcgaggaaaaactccccattaggaagaaacctcagacagacccaggctcttggtaggcggtgtctgacagtgccggttggggatgtgatgaacagtggcaataatagtcactttaaagataatggaatagtgacttcaaatgatagtcttagtagttcatgtcatatcagggcgctgcagggcgttacaggatgtagcgcagcacagcagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157587 True 242 lncRNA 0.49 1 22178293 22178534

Neighbor

gene id symbol gene type direction distance location
efcab14 efcab14 coding downstream 153226 22017305 ~ 22025067 (-)
LOC120568177 LOC103364111,LOC100699442,LOC102776848,LOC102214268,LOC101483916 coding downstream 162447 22004839 ~ 22015846 (-)
rpe65a rpe65,LOC103479670,LOC108241705 coding downstream 184120 21988812 ~ 21994173 (-)
dtna NA coding downstream 308337 21848903 ~ 21869956 (-)
mapre2 mapre2 coding downstream 330927 21834514 ~ 21847366 (-)
LOC120568852 LOC103373233 coding upstream 32053 22210587 ~ 22220682 (-)
dhx30 dhx30 coding upstream 47645 22226179 ~ 22236510 (-)
wrnip1 LOC104941238 coding upstream 59954 22238488 ~ 22247588 (-)
foxc1a LOC103370816,LOC104931527,LOC104941097,LOC102782320,LOC100700524,LOC102209299 coding upstream 245159 22423693 ~ 22425935 (-)
LOC120567665 LOC104931526,LOC104941071,LOC103370819 coding upstream 253111 22431645 ~ 22434977 (-)
G116893 LOC104955993 non-coding downstream 175435 21997794 ~ 22002858 (-)
G116832 NA non-coding downstream 367147 21810862 ~ 21811146 (-)
G116758 pcmtd1 non-coding downstream 517826 21658679 ~ 21660467 (-)
G116743 NA non-coding downstream 582987 21592739 ~ 21595306 (-)
G116692 NA non-coding downstream 878211 21297415 ~ 21300082 (-)
LOC120568857 NA non-coding upstream 3430 22181964 ~ 22205991 (-)
G116954 NA non-coding upstream 16790 22195324 ~ 22200980 (-)
G117052 NA non-coding upstream 451362 22629896 ~ 22632268 (-)
G117055 LOC104929332,LOC102785373,LOC100706434,LOC102205468,LOC106925933,LOC103142996 non-coding upstream 492199 22670733 ~ 22674450 (-)
G117112 LOC104949490,LOC101162245,LOC103371147,LOC108239677,LOC107092425 non-coding upstream 628538 22807072 ~ 22809753 (-)
higd1a higd1a other downstream 1167717 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 1182726 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 2382534 19793342 ~ 19795759 (-)
G116138 NA other downstream 2712913 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 2955567 19221791 ~ 19222726 (-)
G116969 NA other upstream 83464 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 1167184 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 1251832 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 1290086 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 1672539 23851073 ~ 23856621 (-)

Expression


Co-expression Network