G117052


Basic Information

Item Value
gene id G117052
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22629896 ~ 22632268 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157760
CACAGTACACTCCACTCCCAAGAAAAGTCAAGGATGCTTTTTCAATGCACAATAAGACACAAAACAGCAACTATACAGTTAgtgttttaatatttattattttctgtataaTTGCATTGGCAGTTTTCATTACAAGAAAATGTGCACAATGTTTAATGTATCATTTTAGACAATTTCCATCTACAGttgttaaacacattttttgaaaatggacactaaaatgtgtaaaaatgcaTCATGAATAACCCATGACGTGTAACTATACGGAtgtcaaaataaacacattcaaacCACGTGAGAAAGAAATAATGATGAATCAGGCTGAATCACTAAAAAGGGTCATTTTCTCTTTGTACCCTCTCTGTCCTTGGTCAAAAGCAAACTCTGTACGCTTGACTACATCTCTGTAACATTGGTTGATTTGCACTTGAGGTTTAAAGCAAGCGTTTGGTCAAGGTTGTGTAAACAGTTTTGAAAGGCACAAGATTATGTTACAATCTGTACATCTGTTTATTTGGTgcaaagagaaaagaggaataCTCTCCATCGGCATCAGGAGTAATATGTTCTGATCTACAGCAAAATATGACAATCCCTCAGCAGCATCTAATACACAAGATATGTGAAGAATAGAAATAACCTCTGATATCGGAGGAGATATTATCCTATGCAAATAACTACATACATAGTGCATTCCCTTTCGTATACCAAGCTCTTGCCTATTTCAAAGCAGCACATATGTAAAACTTACAATATCCCATTTCCAGTTTAGCGGACTATACATGATATTCAAGTATTACAAGATCCATCTCAAGGTCTTAAAAAGCTCAATTCTAAGCTTAACTCTCCCTCTACCTTTGGAATAAAATATGCGATGAACCCCCCCAGGCTTAGATTGCATTAGTAGGAAGAAGGCAATGGTTGTTGTTTGTAAAGTCATTCCTGTGGCTGTTAAATAACCTCTGACTCATGTTGCGCCAAAGCTGGAGGCAGCGTAGTTCCACATGGACCCTGGAAGTGataACATGAAGTACTCCGTTTTTGGTGTTGTTTGGGTGTTAAACTCCGCCACTGGGACACCCCTGGATGCAATCTGGGGGCCAAACATGGCTGCTGGGTAAACGATCGAAGACGTGCCCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157760 True 1142 lncRNA 0.38 2 22629896 22632268

Neighbor

gene id symbol gene type direction distance location
LOC120567969 LOC103368948,LOC102290339,LOC102784041,LOC100706175,LOC101476947 coding downstream 7018 22576333 ~ 22622878 (-)
phlpp1 LOC103368950,LOC101477421,LOC102207086 coding downstream 56089 22525261 ~ 22573807 (-)
opn7a LOC102784990 coding downstream 126317 22496072 ~ 22503579 (-)
dusp22b dusp22,LOC103368952,LOC104931523 coding downstream 144925 22480588 ~ 22484971 (-)
irf4a LOC103368953,LOC104943383 coding downstream 149932 22466809 ~ 22479964 (-)
LOC120569075 LOC104929330,LOC103371151 coding upstream 56806 22689074 ~ 22694675 (-)
LOC120568657 tns3 coding upstream 71196 22703464 ~ 22738248 (-)
LOC120568106 dsp,LOC104949487 coding upstream 107366 22739634 ~ 22757614 (-)
LOC120567909 NA coding upstream 183698 22815966 ~ 22824647 (-)
psma8 psma8,LOC102789190,LOC101062730 coding upstream 539790 23172058 ~ 23177122 (-)
LOC120568857 NA non-coding downstream 423905 22181964 ~ 22205991 (-)
G116954 NA non-coding downstream 428916 22195324 ~ 22200980 (-)
G116922 NA non-coding downstream 451362 22178293 ~ 22178534 (-)
G116893 LOC104955993 non-coding downstream 627038 21997794 ~ 22002858 (-)
G116832 NA non-coding downstream 818750 21810862 ~ 21811146 (-)
G117055 LOC104929332,LOC102785373,LOC100706434,LOC102205468,LOC106925933,LOC103142996 non-coding upstream 38465 22670733 ~ 22674450 (-)
G117112 LOC104949490,LOC101162245,LOC103371147,LOC108239677,LOC107092425 non-coding upstream 174804 22807072 ~ 22809753 (-)
G117117 NA non-coding upstream 193105 22825373 ~ 22825583 (-)
G117114 NA non-coding upstream 200798 22833066 ~ 22834881 (-)
G117119 NA non-coding upstream 203787 22836055 ~ 22865958 (-)
G116969 NA other downstream 361337 22261998 ~ 22268559 (-)
higd1a higd1a other downstream 1619320 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 1634329 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 2834137 19793342 ~ 19795759 (-)
G116138 NA other downstream 3164516 19464700 ~ 19465380 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 713450 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 798098 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 836352 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 1218805 23851073 ~ 23856621 (-)
G117560 NA other upstream 1867112 24499380 ~ 24536496 (-)

Expression


Co-expression Network