G117221 (LOC101467149)


Basic Information

Item Value
gene id G117221
gene name LOC101467149
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23472547 ~ 23473684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157990
TCAAAAACAGAAATTGTCAAAATGTCAACTTACAATCACATCAAACTTGGAGTAAATATCCACAACTTTGCCTGTAACATGACATAAAAAGTAAGTTCATTtagtattataattattatactTTGTCAACACTGATGTTTGAGATCTTACCCGACTCATCTACCACAGGCAGGGCAGACACTCGTCTCTCCACAAAAATGTTGAGTGCTTTGATGATGGGCGTGTACGGGTGGATGAAAGCGATGTCCTGGTACGAACCAATGCCCAGCTCCCCGAGAGTCTGCTTCATGAATGCTGGCTTTGGCATTTCACACATAAAAAGCTGGAGGAACTTGAGGATCCTCTTGTGTGTGAGAATATAAAGTGCATTCCCTGTGACGGGGTCGATGACAGGCAGGCGGTGAATTTTGTTTTTGATGAGGGTGTACACGGCATCAAataggCTTGCATCAGGTGATATGTTGACCAGAGGCTTAAATGTTGCTTGTAGGTACACCTCTCTCCATGTCTCAAGTTTATGCTCCTCTAATTCATATATTTGCACCATCGGTGACTTATAG

Function

NR:

description
5'-AMP-activated protein kinase subunit gamma-2 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157990 True 560 lncRNA 0.42 5 23472547 23473684

Neighbor

gene id symbol gene type direction distance location
bcl2b bcl2 coding upstream 4736 23441591 ~ 23467811 (+)
vps4b vps4b coding upstream 39173 23422716 ~ 23433374 (+)
LOC120569134 NA coding upstream 128652 23325302 ~ 23343895 (+)
LOC120568373 znf521 coding upstream 169758 23212498 ~ 23302789 (+)
ss18 ss18 coding upstream 282976 23177741 ~ 23189571 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding downstream 342356 23816040 ~ 23820441 (+)
trnaw-cca_13 NA coding downstream 394570 23868254 ~ 23868325 (+)
gigyf2 gigyf2 coding downstream 396367 23870051 ~ 23890968 (+)
snorc NA coding downstream 417460 23891144 ~ 23896911 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding downstream 425524 23899208 ~ 23905529 (+)
G117219 NA non-coding upstream 10247 23446351 ~ 23462300 (+)
G117190 NA non-coding upstream 94031 23377133 ~ 23378516 (+)
G117187 NA non-coding upstream 98348 23373710 ~ 23374199 (+)
G117128 NA non-coding upstream 554441 22917876 ~ 22918106 (+)
G117082 dsp non-coding upstream 718057 22752252 ~ 22754490 (+)
G117228 NA non-coding downstream 19422 23493106 ~ 23566317 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding downstream 268800 23742484 ~ 23745977 (+)
G117315 NA non-coding downstream 375003 23848687 ~ 23848946 (+)
G117320 NA non-coding downstream 382445 23856129 ~ 23856531 (+)
G117344 NA non-coding downstream 423559 23897243 ~ 23897646 (+)
kdsr kdsr,LOC102792240 other upstream 31704 23433625 ~ 23440843 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 791254 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 852416 22608049 ~ 22620131 (+)
LOC120568354 NA other upstream 1575156 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 2557225 20882617 ~ 20915322 (+)
LOC120567964 dpp6,LOC100710983 other downstream 119048 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 377195 23850879 ~ 23855157 (+)
G117353 LOC103366712 other downstream 432186 23905870 ~ 23908401 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 438980 23912664 ~ 23914498 (+)
G117400 LOC104965054 other downstream 548757 24022441 ~ 24023659 (+)

Expression


Co-expression Network