G117228


Basic Information

Item Value
gene id G117228
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23493106 ~ 23566317 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU157998
TAGCACAAACACACTGGCAGGATGATGTAATATCATACAAGAGAAGAAAAATATCCAAGAAACAATTTTGTTACAACCATTCATTgagaaaatatatacaattgAGTCTTcggaaagttaaaaaaatacatgcCATATACATTACAAGTTCTAAGACTGTCTCCAAAATTTTACAGTCGACTTGATATTGTGCACGCAAAAACTCTTCTGTTTCTAAGCATGTGACTTGTGAAGTGTCAGTATAAGAAATATTTCTGATTAAGGAGAATGCCATTTCTGTCCAAGGTAGATCAACCCACGGTTCCAAACAAGAGGTCCCCATTACGATTCTGTCTGTCACACACTGGTTCGTCTTCCTCACAATATCATTAGACGTTTGCACCTTATTTTAAAAgcaatgtaaaaacaaacaggTAAATACATGTCGGTGTTCCTTTTCgtgttaaaaagttaaaaagtcaTTTTTGGGTTTCAAAACCTAAttcacagtttttttaaatcaaacctGATTAACAGCAAACAGATCACACTGATCTTGTACTACTTAAAGagtcttttttctcttttgattCTGTAACTGATAACTTGTTACGTTAGTcaacaaaaatatttctttttttgagtGGTCAAAGCATGTGTAAGTCACAAAACACTACGCTACAATACCTTACttttaatacaacaaaaatactttgtGAATTATTGTGGTTATATTACAAATTCTGTACAGAATAATCATAATATATACTCTCAAACTGAAATAACGTCCATCTTAAATAAATTTCAAtgacaaacagaacaaaaacaatttaaaaacacccAAACATCAAGAAGGTTAAGGTAGTATTTGGTCGGTTATTCCTATAGTTTTCTTTATGTACATTTATACAAAAGTAACAGCATGTCTTCCTCAAtcttcaaaaacaaaagcaaactaGCCTTCTTCAAATCAATCTCATCATTTTAAGAATAAAATTCATTCACTCAGTAATAAATACAAAACCTCTCGAATTCCACACAAATCACATGACAGAGACCTATGATAAAACTGACTCATGGAATCAAGTATTTTAAAagttttcgtgtgtgtgtgtttttttgtttattttcttttttttagtgcaAGTTAATATTCCCTTCGCGGTATTCATTGCTGTACATTCCTCATTCAGTGATGTCTACATTTAGTCATACGGTATACATTAACAGTATGAAACAAAAGGGCCTGCCCTTAGTAAGCAATAAGGCCGCACCCTGCACAGTGCTTTCTCATTCGCTGGTGGATTCCGCACCCCATGTACACCAAACAAACGCACagatacatacagacagaggTATCTCATACAACAGAGCCCCTCACATATGGCACAAGTCACATCCTGCTACTATGTTACATTTCCCTTCCTCCACCCATTTCTTTCCACGATCTTGATGAACCAAAAAGTAAATTCATTCATCCCCGCAAGGGTTCAGGCCTTCTGCTCATTCATGAAATGACTTTAATGCGaaacctttttttccctctgtgcAGAGATCACAGCATCCACACACTATAGCAAGGAATGCATTTAGGTTGGTTGTTTTCTTCAGTTAATCCACTTCCTGCATTTAGGAGCTCCACAGTGGCAAGCAATCTTGTGCTGACCCTCCACAGTgccaagcaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157998 True 1666 lncRNA 0.35 2 23493106 23566317

Neighbor

gene id symbol gene type direction distance location
bcl2b bcl2 coding upstream 25295 23441591 ~ 23467811 (+)
vps4b vps4b coding upstream 59732 23422716 ~ 23433374 (+)
LOC120569134 NA coding upstream 149211 23325302 ~ 23343895 (+)
LOC120568373 znf521 coding upstream 190317 23212498 ~ 23302789 (+)
ss18 ss18 coding upstream 303535 23177741 ~ 23189571 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding downstream 249723 23816040 ~ 23820441 (+)
trnaw-cca_13 NA coding downstream 301937 23868254 ~ 23868325 (+)
gigyf2 gigyf2 coding downstream 303734 23870051 ~ 23890968 (+)
snorc NA coding downstream 324827 23891144 ~ 23896911 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding downstream 332891 23899208 ~ 23905529 (+)
G117221 LOC101467149 non-coding upstream 19422 23472547 ~ 23473684 (+)
G117219 NA non-coding upstream 30806 23446351 ~ 23462300 (+)
G117190 NA non-coding upstream 114590 23377133 ~ 23378516 (+)
G117187 NA non-coding upstream 118907 23373710 ~ 23374199 (+)
G117128 NA non-coding upstream 575000 22917876 ~ 22918106 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding downstream 176167 23742484 ~ 23745977 (+)
G117315 NA non-coding downstream 282370 23848687 ~ 23848946 (+)
G117320 NA non-coding downstream 289812 23856129 ~ 23856531 (+)
G117344 NA non-coding downstream 330926 23897243 ~ 23897646 (+)
G117346 NA non-coding downstream 332333 23898650 ~ 23898912 (+)
kdsr kdsr,LOC102792240 other upstream 52263 23433625 ~ 23440843 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 811813 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 872975 22608049 ~ 22620131 (+)
LOC120568354 NA other upstream 1595715 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 2577784 20882617 ~ 20915322 (+)
LOC120567964 dpp6,LOC100710983 other downstream 26415 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 284562 23850879 ~ 23855157 (+)
G117353 LOC103366712 other downstream 339553 23905870 ~ 23908401 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 346347 23912664 ~ 23914498 (+)
G117400 LOC104965054 other downstream 456124 24022441 ~ 24023659 (+)

Expression


Co-expression Network