G117311 (LOC103366706,LOC100534445,LOC107383951)


Basic Information

Item Value
gene id G117311
gene name LOC103366706,LOC100534445,LOC107383951
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23815891 ~ 23819966 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158107
aagttttaaatGCATCAATAAAAAACACCAGGTCCAGTAAACATCTTTTACCAAATCAGGTGCATTACAATATTGCAGTTAACAAAAGGATAAAACTCCTTGAGGAAAATCTACAAATGGCATTATGGACAGATCCACCACATTTGGACAACATAAGTCTGGGTACAGACATCTACAAATGTACCATACAAGATGACCCAGTGTGTCGAAAACTGAAGACATCAAACATTGCCATTTAAAATATAGACACTTCGTATATCAAGAGTTAGTAATATTGAAGACTGGATAATTAAAAATGCAGGTCAACATATTAACAGTACATGAACTAGTCAGATTTATGATTAAGTTACACATGCTGTCCAGCCTTAGCAGCTCTACTCTTCAGCATCCATATGCTTTAGTTCATTTTAGTCAAACAGAAAAGGGAAAGATATGACATGGGCTATAAAACAGTGTTACAAAAGCCACTCCCTTCTAAAGAAGAGGGGAAAGACATACCCTGCCATTACCAGCGCATATCTACCAAGGAAATTTCCTTGTCACATTTTAAGTTGACCAGCCAACTTTAAGCCATTAAAATGGAGGTTAAATCATCtcagaaggagagaaaaaataaaaatacagtactAGTTTAAAGAAAAGATAAGTCGTGAGGGCAGTGGAAGAGAGTCACTGAGTTGTGGATTTAGTAATCCGTAGGTTCATCTCCCTCCTCGTTCAGCAAACAGGTGCGGATCAGGGCCTCGGTCACACTGTACGGGTCACAGTTGGCCGATGGGCGACGGTCCTCGAAGTAGCCCTTCTTCTCCTGGCCGACGTTACGAGGAATGCGGATGCTGGCGCCACGGTTGGCCACGCCTGCGGAGAATTCGTTGATGTTTGAGGTTTCATGATGGCCGGTGAGACGGCGGGCGTTGTCGAGCCCCCCTTTGGGATCATAGGAACGGATGTGATAGCTGTGCCTCTTCCCAAGCTTCTCAATGGAATCTTCAATGGCTTTAATCCACCTTCTTCCCTCATCTCTTTTGTGCTGAAGTTTGTATGGCAGCCAGCACCGTTCCAGTTGCCCGTGATTGGCTTGGGGTCAAATGAGGCAACAACGCCAAAATCTTCACAGACACGGTGCAGGATGAAGCGTGCCACCCAGAGATGATCACCCATGTTGATCCCTTCACAAGGTCCAACCTGGAACTCCCACTGAAAATGCAAAAGTTTATTATAAAAATCAAATTTTTAACTGGCTGTTAACACCATAAAAATGTCTAAAGTCCAAATGTGGATTAGGATTTCATCTTTACCTGAGCAGGCATCACTTCTGCATTTGTGCCACAGATATCAACTCCAGCATACAGGCAGGCTCTGTAATGGGCCTCCACTATATCTCTGCCATAGGCTTTGTCAGCTCCCACACCACAGTAGTATGGACctgtaaatattttaaatattaaaacaaaCCATCCAGACAAGAATTCATTTCTATGCACAAAAGCTTTAAAGTAGCTGCTTACCTTGTGGTCCAGGGAAACCATTAGATGGCCAGCCAAAAGGGTGTCCGTCTGTGCCCAGAATGGTATACTCCTGCTCCATGCCAAACCAAGGATGCTGGTCCTCCACCATCGCCATCACCTTGCTGCATGTGAGTCGAAGGTTAGTTCTGCAGGTTTGCGGTTGTACTTGAGCACTTCACACAGGACCAGCTTGTTAGGGTCTTTACGGAATGGATCCCGGAACATGGCAGCAGGAATCAGATACATGTCGCTGTTGGAGCCCTCACACTGGTAGGTACTGGAGCCATCGAAGTTCCACTCTGGTAGATCTTCGATGCTTTTGGGCTCAAAATCCAGCGTCCTGGTTTTGCAGCGTAGCCCCTCTCCGGTTCCATCAATCCAAATATACATGGCTTGGACTTTATCCCCCTGAGAAAGCTCCATGTACTGCTGCTTGACAGCTTTACTCAATGTGGCGCTGGCAGACGTGGCCATCTTATTTCCTACTATAACACACCTGGATAAACGCGAAAATCGAAATAAAAACTAAAGGACGGACAGGTCCGATGTCTTGTCGTCTGTTGCACCGCTAGTGTCTCTCTC
>TU158109
aagttttaaatGCATCAATAAAAAACACCAGGTCCAGTAAACATCTTTTACCAAATCAGGTGCATTACAATATTGCAGTTAACAAAAGGATAAAACTCCTTGAGGAAAATCTACAAATGGCATTATGGACAGATCCACCACATTTGGACAACATAAGTCTGGGTACAGACATCTACAAATGTACCATACAAGATGACCCAGTGTGTCGAAAACTGAAGACATCAAACATTGCCATTTAAAATATAGACACTTCGTATATCAAGAGTTAGTAATATTGAAGACTGGATAATTAAAAATGCAGGTCAACATATTAACAGTACATGAACTAGTCAGATTTATGATTAAGTTACACATGCTGTCCAGCCTTAGCAGCTCTACTCTTCAGCATCCATATGCTTTAGTTCATTTTAGTCAAACAGAAAAGGGAAAGATATGACATGGGCTATAAAACAGTGTTACAAAAGCCACTCCCTTCTAAAGAAGAGGGGAAAGACATACCCTGCCATTACCAGCGCATATCTACCAAGGAAATTTCCTTGTCACATTTTAAGTTGACCAGCCAACTTTAAGCCATTAAAATGGAGGTTAAATCATCtcagaaggagagaaaaaataaaaatacagtactAGTTTAAAGAAAAGATAAGTCGTGAGGGCAGTGGAAGAGAGTCACTGAGTTGTGGATTTAGTAATCCGTAGGTTCATCTCCCTCCTCGTTCAGCAAACAGGTGCGGATCAGGGCCTCGGTCACACTGTACGGGTCACAGTTGGCCGATGGGCGACGGTCCTCGAAGTAGCCCTTCTTCTCCTGGCCGACGTTACGAGGAATGCGGATGCTGGCGCCACGGTTGGCCACGCCTGCGGAGAATTCGTTGATGTTTGAGGTTTCATGATGGCCGGTGAGACGGCGGGCGTTGTCGAGCCCCCCTTTGGGATCATAGGAACGGATGTGATAGCTGTGCCTCTTCCCAAGCTTCTCAATGGAATCTTCAATGGCTTTTAATCCACCTTCTTCCCTCATCTCTTTTGTGCTGAAGTTTGTATGGCAGCCAGCACCGTTCCAGTTGCCCGTGATTGGCTTGGGGTCAAATGAGGCAACAACGCCAAAATCTTCACAGACACGGTGCAGGATGAAGCGTGCCACCCAGAGATGATCACCCATGTTGATCCCTTCACAAGGTCCAACCTGGAACTCCCACTGAAAATGCAAAAGTTTATTATAAAAATCAAATTTTTAACTGGCTGTTAACACCATAAAAATGTCTAAAGTCCAAATGTGGATTAGGATTTCATCTTTACCTGAGCAGGCATCACTTCTGCATTTGTGCCACAGATATCAACTCCAGCATACAGGCAGGCTCTGTAATGGGCCTCCACTATATCTCTGCCATAGGCTTTGTCAGCTCCCACACCACAGTAGTATGGACCTTGTGGTCCAGGGAAACCATTAGATGGCCAGCCAAAAGGGTGTCCGTCTGTGCCCAGAATGGTATACTCCTGCTCCATGCCAAACCAAGGATGCTGGTCCTCCACCATCGCCATCACCTTGCTGCATGTGAGTCGAAGGTTAGTTTGCAGGTTTGCGGTTGTACTTGAGCACTTCACACAGGACCAGCTTGTTAGGGTCTTTACGGAATGGATCCCGGAACATGGCAGCAGGAATCAGATACATGTCGCTGTTGGAGCCCTCACACTGGTAGGTACTGGAGCCATCGAAGTTCCACTCTGGTAGATCTACAAGAGTCAGAAGAGGACAAGGGACGCTATATTATACTGTAGGACTTAGCATCTTTACGAACGTTTCAGGAGGTTTCAGGAGCCGCTTACCTTCGATGCTTTTGGGCTCAAAATCCAGCGTCCTGGTTTTGCAGCGTAGCCCCTCTCCGGTTCCATCAATCCAAATATACATGGCTTGGACTTTATCCCCCTGAGAAAGCTCCATGTACTGCTGCTTGACAGCTTTACTCAATGTGGCGCTGGCAGACGTGGCCATCTTATTTCCTACTATAACACACCTGATAAGCaaagcagaggagaggagatgagatCTCGGTTCGCTCTGGATCACAAGTgctaaacgttttttttttttaaagggggtaggggtgggggtggcgcaaaaaagcaacacaaaaacGACACCATTGTCGCCTCTTCCAGAAAGGAGGAGGGGTGAAAAACGCGTTGAGGATGTAAAAGAAGGCACAATTCCAGTCTTTTCCCCCCCTTTCCAGCTTGGAAACAAAGGGAAAAGCAAAAGCCACTTTCCACCGCATGTGCATGACCATTACGATTGAATTGAACAAGGCAGATTGCCAGCTCACAAAGGATACCTCATGGAAAAACCACATTACAAGGCAACAATCGCGACTTCAGAAAAACGCATCTTTACTGTACATCCTGTTGCCAGTACGCCTGTAGTCATAGTTACAATAGTTGGCTGCCACAGTGAAGCAATATTACATCATTGGCTTCCACGTTGTAATCCATCACCTCGCCTACTATCTACAACcttatgcaaacacacaaaacgtacacataacatccaaaacagactaaataaaatgttggatcCACTTAAGCGAAATAAATGCCCATAAATGTAAGAGTTAATTGTCTAAAGTAGCCTATGGTAGTGTACACGTAACGCTATCGTTACAATGAGTAGACTTCTGAGCTGCTCCTGCCCCACCAtgattaagtttaaaaaagcagGGAAAAGAAGTCAAATTACCTGGATAAACGCGAAAATCGAAATAAAAACTAAAGGACGGACAGGTCCGATGTCTTGTCGTCTGTTGCACCGCTAGTGTCTCTCTCATTATCTGGTACCCAGTCTGCGCCGATCCGTGCACATTTATAAGAGCAGGAACTGGGACGTCGCGTCTTTGATAGGTCGGAGAGACGGCAGCGTGTTGGTGATTGAAGCCATGTAGCTCGATCATTGGACAGGCTGCAAAACAAACGGAGCCTGCAACGCCCTCTTGCAGGAGCTCAGCTTAGCCGCGTGCTGCCAGTGTCAGACCTATGGTGACCATCc

Function

NR:

description
PREDICTED: glutamine synthetase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158107 False 2090 lncRNA 0.45 5 23816111 23819966
TU158109 True 3040 lncRNA 0.45 4 23815891 23819966

Neighbor

gene id symbol gene type direction distance location
LOC120568659 LOC104941252,LOC103479586,LOC107083372,LOC104918287,LOC103143038,LOC100704482,LOC107383950,LOC101069707,LOC103396165,LOC106929027,LOC101464457 coding downstream 29850 23736978 ~ 23786041 (-)
prtfdc1b LOC103364899,LOC104918289,LOC107083373 coding downstream 81507 23725487 ~ 23734384 (-)
arhgap21b NA coding downstream 91860 23682735 ~ 23724031 (-)
kmt2cb NA coding downstream 244528 23492963 ~ 23571363 (-)
LOC120568611 lama3 coding downstream 394114 23363029 ~ 23421777 (-)
kncn kncn coding upstream 41205 23861171 ~ 23865766 (-)
trnai-aau_23 NA coding upstream 47986 23867952 ~ 23868025 (-)
trnap-agg_8 NA coding upstream 49189 23869155 ~ 23869226 (-)
itm2cb itm2c,LOC103366712 coding upstream 85880 23905846 ~ 23912764 (-)
per2 LOC103366709 coding upstream 96775 23916741 ~ 23933804 (-)
G117302 NA non-coding downstream 29418 23786090 ~ 23786473 (-)
G117265 NA non-coding downstream 353595 23446358 ~ 23462296 (-)
G117206 LOC101469337 non-coding downstream 473968 23341354 ~ 23341923 (-)
G117205 osbpl1a,LOC100709115,LOC102786734 non-coding downstream 474576 23339536 ~ 23341315 (-)
G117203 LOC103364864 non-coding downstream 478273 23331379 ~ 23337618 (-)
G117324 NA non-coding upstream 22280 23842246 ~ 23843595 (-)
LOC120568991 NA non-coding upstream 23865 23843831 ~ 23849958 (-)
G117337 NA non-coding upstream 66498 23886464 ~ 23888799 (-)
G117341 NA non-coding upstream 74193 23894159 ~ 23895101 (-)
G117342 NA non-coding upstream 75553 23895519 ~ 23895770 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 324279 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 384899 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 454311 23345718 ~ 23361580 (-)
G116969 NA other downstream 1547332 22261998 ~ 22268559 (-)
higd1a higd1a other downstream 2805315 21008048 ~ 21010576 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 31107 23851073 ~ 23856621 (-)
G117560 NA other upstream 679414 24499380 ~ 24536496 (-)
G117732 NA other upstream 1102237 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2495804 26315770 ~ 26319595 (-)
G118175 NA other upstream 2841655 26661621 ~ 26665952 (-)

Expression


Co-expression Network