G117319 (LOC101487892,LOC104941256)


Basic Information

Item Value
gene id G117319
gene name LOC101487892,LOC104941256
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23850879 ~ 23855157 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158130
TTTGCACTTTCTTTTTGACACATCTGGGGAATCGTTTATGCTTTGTCTTGTTGTTTTCCTACAAACTTCTGTTAGAGTCTTTATAGAGTCCATCTTGGAATGAATAATGCTTGTAAAGATGATCAAGCCCCAAGAAACGGCTGTTATCCTACAAGATCACAATGATCTTGTTTGAAATTTGAACATATAACAAACCCAGTTggacatttttattcatttcacttcatgatgacacaaaatgcaatgtaGCAAGAACACAGTGTCATGCCACGCATACATAATGAGCAACCTCGTGTTCTACTGAAAGAGCCTTTTTATTTGTATCTTTTGAAAGATTCACATTTGGaatgctgcttttttttaaaaataaacaaattataaTCTTCACAAAAATATTCTATCCTTTACATTTTCCAGATTTTCATTTTTGTAGAAGTGCTACACAAATTAAAATACACAGATAACACCAATAGTTCACAAGAGGGTGTTTGCATTTCCATAACTCAGTTCtctgaacttgcaaaaaataagcttagagagagagagctttgaCAGAGAAACTGGTCCATTTGAGGAGCTGTGTCACAAATAATGAAGGTTAACACCTTATATGGTAATGCTCTGGTCACTGGACTGTATATCTGTATGCAGATGTTCACTCACCTGCTACTCTATATAAATGTCTGCTGAGATGAAACATCTAAGTCATTTGCATGCATTTGTTAtacccacacacaaaaaacttgTTGAGGCTTTTTTAACAATATGGAATAGAAATCCAGAGCCAAACAAAGGCTTTCTGAAGCTAAATGCTATTGTGCACTTGTGTTATAGCCCTCATTAGTTTGATTCTGATATCTCAGTCTAAGGCAACTTTCCTTTCAAAGGAAATCAGTTTGAATGTCTCTTTTAACCAGTCGAGTTCATAACTGACAAGAAGACATCACAGTGACGGGGAACAGTTACTTTTTTATGCAATCTGAATATCTTAACTCTGTCAGACTTCTTTGCTCCCCTATATTGTGTATACAAGGTCCAGTGGAGGTTAACTTCTTCTGAATGTGAAATTAAAGTTTGTCTTATActggacataaaaaaaaaatatatatcaatacTGTGAAATTCATATTTGTAAAACATTCTTTTGTGGGGTCCCACTGTGAATTCAAATTCATGATGAAAAAAATCATCATTATGACACATTTCTATGCCTTACAGTAAGGTACAGTAAGTGTCCTATTCCACTTGGATCATGATATGaatatatgaatgtatatgaAATAGCATGATGAGCTCAACGTTAAAACTGTGAGTTGACTCCCTATTTTTTAGCAGGGCGCACTAATTCTGTTAAAATTAGAAGATTCTTATACTTGTTCCAGATGATCCCCATTTTTCTAcccaagtcattttttaaacaattggACAAATATATctctacatttatttgaaataaatctAAGCCACGTGTGCGAAAAGGTATATCTGAAAAGGTCAAAACCAAAAGGTGGACTAGGTCTACCCAATTTACATCATAATTATTGCAAACATATCTAAATTATCTTTCTGTATTACCACATTTTCCGACTTGGTCGCTATTGACCTCTCCATTACCTCTATATCTGGGTATCCACACTGCAAATCCCAATGTAAAAACTTCCCTTAGAATCTGGAACCAATTCAGAAGACACTTCAATCTTCAGCAAACAAGCACTTTTTTCCACTTAACCTTTAAACACCTATTCTTACCATCACAAATAGATTCAGCGTTTAAGTTGTGGCAATggtctttgtttttttcctaagtttatgtaaaaacaataatattCCCAGGTCACACTTTTTTAGATACTTGCAGGTCCAGAAATGTATCATTTTCCATCCTTCTCTGGTACTACCACAGTCGATCCGGTATTTTACCTCTTAGATCTTAACCCATATGGGAATGGCCTAATCTCCAGGGTATACTGTGATTCAGCACATTAAGCCCCTTACTTGTGCCGACAACAAAGTAGCTTTGTAAGAAGACATTGGGGACGAACTATCAGAGCAGGTATGGGAAGACAGTATAGCACACATCCATACCTCATCCCTCTGTATAAGACATGGATTAATACAGTTCAAAGTCCTTTACCAACtgcatttttcaaatgctaGACTAGCTCAAATATTCCATACAGTGAATGCCAATTGACCCTGATGCCACCAAAGCCCTGCCACTTTGGGCCACATGTTTTGGACATGTCAGACACTGAATCATTTCTGGAAACCTATCTTTGAACCCCTCTTGCATGTGTGTGGTAGAATGCTTGACCTCAACCCTATCACTGTCATTTGGCATTCTCTCTGGGCCCCGCCATCTCATTCTTCTCAAATGTCCCCCTACATTTAATGGATCAAAAAGATATAATGACCTAGGAAAAGTTTTATACAACTTGGTCCCCTTTCAAAGGATACGTAGAAACATTGTCTTTTGCTTGAATTAAGCCCTTTTTCTACCAAAGTTATAGTGCTAAGACACTAAAGAGGAGAACTTTTATGGTCTGACTCTAGTCTAGTCTATATGCACACATCTTGCACACAATTCTTTTTTGACTATTTAGATATCATTGTTTTTGTCTACTGTTTGCTTGATtcatttgtatgtatttatgttgacCCTGGTATGGATGGGGGTGGAAATGGGAGATGTTACTTGTTATTTTGTAcggaaaaatctaaataaagtttgcaaaaaaaaactgagttgCGACTACCATTAATGAAAATGTGCATGTGAAATCACAAAGCAATGTGCTGAGAAAAATATTCACAGTGTTAATATTGGTGTGATGACAGATGTTTGTCAAACTACAGGTAACGCTTGTACACAGTTACATGTTATGTTAACACACTGTTTGTTCATGACAAATGTATTGGCTGTAGACAAGTAGTGTGTTATCACTTACTTGTTAAAAGAACTATAAATGCAGAGAATTTAATGTCAGGTGAGAGGATATTGCTTTGGGACCCCTATGACCTATAATATCTAATgccccaaaaacaagttcagcaCTGAGAATGGCACACAAAATGCCAAATGTCACTACAAATGTACTTGTACAGTTCACTGTTCACCTTTCACATCTAATCTTTAAGTTTTCAGAACAAATAAACAATCATATTTTTCAGTCCAGCCCTCTGAAATCACTGCTGACCGCTGAGGTTACAACAAACCGGAGTAGCAGTGGAATATAAATTTTTATGGTTTCCGACACTTTTTGTTATATTTCCAAATTGAAAACTGTTCATAATGCCCTACGTTAAAAACAAAGACCTGTAGGAAAAAACAGCACAACAGAGGTAGGAATTTGAATTCCAAAACCTATGATCCACAAACACTTGGATGTTTCATTAACTTTGCATGCTAATTACCAGTTGGCTGCACAACAAGAAAATCAAAAGCAAACTGTTCACGACCAGAAATATGGCACTACGTAAACTAGAGGACACAATCACACTCAGCAAGCCCTCTACCCAGAAGGATATTTACACTGGCAATCACTCCGTTCTTGGAAGAGTTTCTGCTTTGCTAGGCGACTTCTTCACGTGGCAGGTTGAGCCTCACCTCCCCTCCTGTTGCTGTGGAGGCTGAGTAGACTGCGGTGGCGGAAACAGAAGGGCCGTTGGTCTCCATGGTGAAAAGATTGCAGGGTCCTGGTAGGGCCATGTCAGGAGGCTCCTTTTCTGGGCTGGATGCCTGGGATGATCCAGGCGAGGATGTGGGGCTTAGCTGCACAGCTGTAGTATCCTGCAGTGTGTGCTCGCTGGTCTCTATTTCAAACGTTGCTCCACCAGCCAGCCCGCCATGTCCCATCAGCCCTGTACCTCTGCTGCCCACCTTAGACCTCCGGGAGctgtggggaggggggaggcGGCTGCACACACAACAGGCCCCGAAAAAGGAAAAGGCCACCAGCAGGAGGATAGGTCCGATGATGATCGGGGGATTGGCAGAAGGCACCAGTGTGCTGAAGGCGAACGCTCCCACCAGGGTGATGTTGAGTCCAGCCAGCATGATGCATAGGCCACAGGCACAGCAGAGTGCCGGAGAGGGCAGGCCATGAGGGCGAGACTTCCTCCTCGTCTTCTTCTGTGGCTCCTTTTTAGGTACAGGGGTGGTGGTGTTTCTATCAGTGATGACCATGTCTTCACCTCCAGGCTCTGTCTCTTCCACTGTGTTATCAAATCTCTCTGTCTTTCAGTCCAAACTCTTCCCCATGGCAATGCTTAAATAAAT

Function

NR:

description
uncharacterized protein LOC101487892

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158130 True 4279 TUCP 0.40 1 23850879 23855157

Neighbor

gene id symbol gene type direction distance location
glula LOC103366706,LOC100534445,LOC108239682 coding upstream 30438 23816040 ~ 23820441 (+)
bcl2b bcl2 coding upstream 383068 23441591 ~ 23467811 (+)
vps4b vps4b coding upstream 417505 23422716 ~ 23433374 (+)
LOC120569134 NA coding upstream 506984 23325302 ~ 23343895 (+)
LOC120568373 znf521 coding upstream 548090 23212498 ~ 23302789 (+)
trnaw-cca_13 NA coding downstream 13097 23868254 ~ 23868325 (+)
gigyf2 gigyf2 coding downstream 14894 23870051 ~ 23890968 (+)
snorc NA coding downstream 35987 23891144 ~ 23896911 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding downstream 44051 23899208 ~ 23905529 (+)
clcn2a clcn2,LOC102213982,LOC102290034 coding downstream 108792 23963949 ~ 24005011 (+)
G117315 NA non-coding upstream 1933 23848687 ~ 23848946 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding upstream 104902 23742484 ~ 23745977 (+)
G117228 NA non-coding upstream 284562 23493106 ~ 23566317 (+)
G117220 NA non-coding upstream 331110 23468620 ~ 23519769 (+)
G117221 LOC101467149 non-coding upstream 377195 23472547 ~ 23473684 (+)
G117320 NA non-coding downstream 972 23856129 ~ 23856531 (+)
G117344 NA non-coding downstream 42086 23897243 ~ 23897646 (+)
G117346 NA non-coding downstream 43493 23898650 ~ 23898912 (+)
G117355 NA non-coding downstream 55365 23910522 ~ 23915931 (+)
G117359 NA non-coding downstream 61601 23916758 ~ 23920029 (+)
LOC120567964 dpp6,LOC100710983 other upstream 165075 23592732 ~ 23685804 (+)
kdsr kdsr,LOC102792240 other upstream 410036 23433625 ~ 23440843 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 1169586 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 1230748 22608049 ~ 22620131 (+)
LOC120568354 NA other upstream 1953488 21870953 ~ 21897391 (+)
G117353 LOC103366712 other downstream 50713 23905870 ~ 23908401 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 57507 23912664 ~ 23914498 (+)
G117400 LOC104965054 other downstream 167284 24022441 ~ 24023659 (+)
LOC120569114 NA other downstream 194607 24049764 ~ 24054704 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 714371 24569528 ~ 24578312 (+)

Expression


Co-expression Network