G117341


Basic Information

Item Value
gene id G117341
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23894159 ~ 23895101 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158156
CGTCTGTTCTCTTTCCATCCCAAATTGTCCCTTTGACATTCCTCCCATCTGAGCATGAAGTTACCCTGAGACTTTTCACACCTTGACAGTAGCCAGACAAACAAGGTCTCTTTCTACGCCACATTTCTGTTTCCTAAGACAACTTGTTAGAGCGCACAACTGAAGATAAACCACCAAAATGACAATTGTGGTTGCTGACATCTTTATGGTGCCTAAAGAGCGGTACAGCTATTCTTTTGAACAGGGGGGAAATGTGATCTTCATCTCCCCTGGAAACAAACTCTTCACACACAAGCCCACCCACTCACTGATTCACTTATCCTATCCTCAAACTCTACACATACCAACAAAACTGTAATCCAAACATATTTACACTCAGTTTATTTAACTCTACATATTTACCCTGTAGCCTCGGACGCCCTCAGTAAACTCACTTTCACCTTGCTTAACATCTGCCCTCTGCTGTCTTTTCTGTGTCATTATCAAAGAAGCCTCTTAATATCTCTCTACATGATTACTAAGAAACTAGTGCATAATGATATAATCTCAAGTCTTAAACGTCAGTATGTTAGCCACATTATTTTCTGACTTTTGATATGAACTTCTGAGGTGAGTATTTTGATGCTGCTGTGTTGACTCTGAGTCGTGTGCAGCTTCCTGTCCTGTAGCTGGCTGGAGGTTTGGAGGTCCGGGCCTCTGGCCAGCTCAGCCATCAATGAGGCCTTCAGCTGAGGGCACAAAAGGCAGCTTGTGCGGTCACGGAGGGCGGCGGGCTGCAACCAGTAACAACCGGCCAGGCCCAAACCAGGCACCGGCTGGGCACTGGATGTCAAACAAacttgtttattaaatagtCCCTGTGTGTAAAAGGTTGTGCCTTCTGGACAGCTTGATTTAATAAGAaggcaaaaaataataacatgATGTGTTCCGTTGGTGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158156 True 943 lncRNA 0.44 1 23894159 23895101

Neighbor

gene id symbol gene type direction distance location
trnap-agg_8 NA coding downstream 24933 23869155 ~ 23869226 (-)
trnai-aau_23 NA coding downstream 26134 23867952 ~ 23868025 (-)
kncn kncn coding downstream 28393 23861171 ~ 23865766 (-)
LOC120568659 LOC104941252,LOC103479586,LOC107083372,LOC104918287,LOC103143038,LOC100704482,LOC107383950,LOC101069707,LOC103396165,LOC106929027,LOC101464457 coding downstream 108118 23736978 ~ 23786041 (-)
prtfdc1b LOC103364899,LOC104918289,LOC107083373 coding downstream 159775 23725487 ~ 23734384 (-)
itm2cb itm2c,LOC103366712 coding upstream 10745 23905846 ~ 23912764 (-)
per2 LOC103366709 coding upstream 21640 23916741 ~ 23933804 (-)
LOC120567986 LOC104965059,LOC103366714 coding upstream 53602 23948703 ~ 23959073 (-)
thpo NA coding upstream 64976 23960077 ~ 23963327 (-)
LOC120567987 LOC104918277 coding upstream 86579 23981680 ~ 23983971 (-)
G117337 NA non-coding downstream 5360 23886464 ~ 23888799 (-)
LOC120568991 NA non-coding downstream 44201 23843831 ~ 23849958 (-)
G117324 NA non-coding downstream 50564 23842246 ~ 23843595 (-)
G117311 LOC103366706,LOC100534445,LOC107383951 non-coding downstream 74193 23815891 ~ 23819966 (-)
G117302 NA non-coding downstream 107686 23786090 ~ 23786473 (-)
G117342 NA non-coding upstream 418 23895519 ~ 23895770 (-)
G117343 NA non-coding upstream 874 23895975 ~ 23896911 (-)
G117369 NA non-coding upstream 39818 23934919 ~ 23938107 (-)
G117372 NA non-coding upstream 45124 23940225 ~ 23940794 (-)
G117501 NA non-coding upstream 300206 24195307 ~ 24199562 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 37538 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 402547 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 463167 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 532579 23345718 ~ 23361580 (-)
G116969 NA other downstream 1625600 22261998 ~ 22268559 (-)
G117560 NA other upstream 604279 24499380 ~ 24536496 (-)
G117732 NA other upstream 1027102 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2420669 26315770 ~ 26319595 (-)
G118175 NA other upstream 2766520 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 2924737 26819838 ~ 26824570 (-)

Expression


Co-expression Network