G117353 (LOC103366712)


Basic Information

Item Value
gene id G117353
gene name LOC103366712
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23905870 ~ 23908401 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158168
GCAGCAAGATATTACAAGAAAAATCGACTGTACAACGAAATAAGGTAATTAGGATGGGGAAATATGCGCACGTATCACAGGTCTCTCTCTCAACAGAGACTTATTTGCTCCAGGTTGTACATTAGAAAGACACCCCAAATCTTTTTCAAATTGGGACAAATTAACATTGTACAGATTATAATGCCAAAATAGGAAGGATTGTGAACTGGCGAGAGCTAAAACAGGCAAAATCCaagtgaagaggaggaagagcaaGACAAAATGAGTTTTAGCCTTTGATATCATCTTCAGAAGGTGATCTAAACTAAAAAACATTCTTTCTAAATATTTCATACATCATTAACACTAAGCATAGCATTGCTGACTGCAGACTTTGGTTCCTTCTGTCCCTCTAAAGCACTGCTACTAATTACAGTCTAAAGCCATTATATCCAAGGAGTAGGAAAGTGTGATTCCAAAGTAAATAAAGAGACAAACCATAAAGAAATcgttgacaaaaaaaagttgattttAGATAAAAATCTATGCATGTAACAATATGAAATCCAGAAGAAAAtcaatttacagtatatattgcTTAGGAACGATCAGTTATATACACCAATCATTAATGATACAAACCAGCAAAGAAACGTCTAAACTACATGAGGTATGTTTCGCCATTTTCCTAcattcaaacaaaataaaagaacaaaacaagaaatgaaTTACAACATAAGTGTACCATGCAAGCAGTTTTTAAGTATGCTTACCATCACCCACAGTGCACTGGGTtactaaacaataaataaaaatgacatgaagtgtaaaattaaattaaatcaagCCTTCTCATGTAAATGTCACAAACTGACACACATTAACATCTTATGCACAGCGTGACAGATATATCCAAAACACATTTATAACATCATCCACATACACAGACTGtctgaataaaaaaagacattaacaTTGTACATGAACAATAATAGAGCATtttcaacttaaaaaaacaaacattaaaactgTTGGGACAGATACTTGCTCTTAAAGTGCAATTAAAAGCCTAAAGAATTCAAGAGGTATGGTTTGAAACTGGCTTCAGAGTTGGATGGCTGTGATTTCCGCCTCAGATTCAGACCCTGTCGCAGATGACGGTCTCAACCACAAAAGTGTTCTCGAAGTGACGAATGCTGTGGCACCTCTTTGTCTCACGCCTCTCAATACGCCTGTGCTGGTTGCGGCGTCTGAGGCGGTAGGTTTCTTTGCCGTAGCAGAGTCTGTGGATGAAGGGGCCCAGCTGCCTCATGTTCCTCACCCTCCCTGTCACCATCATCTCCTCCTGGATGATGTAAGTCTGTGGAAGGTACGTCCCTCTCTTGACATTGACGAGCAACTCCCACAGGTTCCGTGGAGGCATCACCAAGGTTGTGTTCAGCTCAGTGATGTAGCATTTGTCCAAAGCAATGTCATGATAAGCTGTGAGGCCCCTCTGAAAGTCGTGGATGATATCAGCGGGGTCACTGCCTCCAAAGTGTGGCACAGGTACACTGATCTGCTCGTAGTTGTCGTCAAGGTAGATGCCAACATTCTCCTCGAGTTCTTGCCGGCCCCTCAGAGGAGCGTACACAGAGTCCTCGTAGACAACCCGGCAGTGGAACAAGCTGTCTTCTGGGATCTGCTAATGGAGCGCAACAGAGCTGAGTTAGCATGTGACAATTACTTTAGGTTGTATCTTTGTTTAATATTTG

Function

NR:

description
PREDICTED: integral membrane protein 2C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158168 True 1733 TUCP 0.40 4 23905870 23908401

Neighbor

gene id symbol gene type direction distance location
LOC120567818 gpr55,LOC103396173,LOC103366713 coding upstream 341 23899208 ~ 23905529 (+)
snorc NA coding upstream 8959 23891144 ~ 23896911 (+)
gigyf2 gigyf2 coding upstream 14902 23870051 ~ 23890968 (+)
trnaw-cca_13 NA coding upstream 37545 23868254 ~ 23868325 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding upstream 85429 23816040 ~ 23820441 (+)
clcn2a clcn2,LOC102213982,LOC102290034 coding downstream 55548 23963949 ~ 24005011 (+)
LOC120568612 NA coding downstream 146378 24054779 ~ 24057075 (+)
LOC120569088 NA coding downstream 175295 24083696 ~ 24089942 (+)
cdc20 cdc20,LOC102779045 coding downstream 229754 24138155 ~ 24142097 (+)
bokb LOC103360102,LOC100707238 coding downstream 243759 24152160 ~ 24160339 (+)
G117346 NA non-coding upstream 6958 23898650 ~ 23898912 (+)
G117344 NA non-coding upstream 8224 23897243 ~ 23897646 (+)
G117320 NA non-coding upstream 49339 23856129 ~ 23856531 (+)
G117315 NA non-coding upstream 56924 23848687 ~ 23848946 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding upstream 159893 23742484 ~ 23745977 (+)
G117355 NA non-coding downstream 2121 23910522 ~ 23915931 (+)
G117359 NA non-coding downstream 8357 23916758 ~ 23920029 (+)
G117364 NA non-coding downstream 21447 23929848 ~ 23933807 (+)
G117374 NA non-coding downstream 39525 23947926 ~ 23948202 (+)
G117385 NA non-coding downstream 73790 23982191 ~ 23982983 (+)
G117319 LOC101487892,LOC104941256 other upstream 50713 23850879 ~ 23855157 (+)
LOC120567964 dpp6,LOC100710983 other upstream 220066 23592732 ~ 23685804 (+)
kdsr kdsr,LOC102792240 other upstream 465027 23433625 ~ 23440843 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 1224577 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 1285739 22608049 ~ 22620131 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 4263 23912664 ~ 23914498 (+)
G117400 LOC104965054 other downstream 114040 24022441 ~ 24023659 (+)
LOC120569114 NA other downstream 141363 24049764 ~ 24054704 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 661127 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 759478 24667879 ~ 24675754 (+)

Expression


Co-expression Network