G117359


Basic Information

Item Value
gene id G117359
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23916758 ~ 23920029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158175
tatttagagaaaatgtaacaaaatatttgcaataaaaaagaagaagaaataagtCCGTTAAAATAACAAAGACAAATTCAGGAAATGTTTAATGTCTCAAATGACAGCATGAGCTTCAAAGTGGCGGAAAGCTCTCTACAGTCACTTGACATCTGTCTGAGCTACTTTACACCCGTGCAATAACCCTAAACTTAGACTTCTGAGGTGACCACACAAAACGGTAATGAGCTTCAGACACTTCCACAGGATGCTCAGAGAGGCTCTTTTCCATATTTATGAGGGGCAACATCAGACCATTCAAGTGTTATGTTGCACACTTTTAAAACTGCTGAAAACATCAATATTCTCCTCACTTTATATTTATCACCCACCATAAACAACATACTACTCTAGTATTTTTATAGTAATCATCTTGGTCTTGCTTGTTTTTTAAGCAGGCGTTTCCATAAAtaacttaaaaacacaaaaagtctcATACAGAAAacggtgtagcctatgtaaaaaaataaacgcTCAGAGTTACAAATATTCACACAAGCATTTAATAAGTTTCACAGCTGATAGTGAAATAAATGCTGAATGGAAATATGCATGAAGTGACTGGCAacttgaaaaatgcaaattttgAAGATGCTTTCTCagaaacaacataacatgatGGTTTGGTGAGTAGATGTAACTTTTACAGAACACGTTTCACCCGATTGTCCTTTTCTGAGTGCAGTCTCAAATGTGTTCAGCACCTCCACAGTGCCTGGGGATCAGTAACAAATGTacttttccattttatgctactatTCTTCTTGCATTGCATTTTCACTTCTACTTTAGTGAATAATGTGAGTAGGTTTTCCAGTCGGAAGCTTCACCAATTGCCGATGAGTCCATGCCTGGTCGCTGCTGTAAACGGGAGCAAGTTTGTTTTTTGCAATTTAATTTCCTAACTCGTGTTTTCCCTCTTCTTCCAGTGTAGCCCACAAGGTGCAATCATCCGTTCATTTGGTGCTTTAGGCTATTCATGACAGCAGTGTCTGGAACTTAACTCCACCTGCTCTCACCACATGCTGACGTAGCATGGTGTTGTTGTAACTGAGGAAATCGCGTCACAAAATGCTGAATTCATTCATTTACTGTAGAACATACAACACCACAGAGCCATTTCCTGACGTGCATGAAGCGGCCTCCAGTTGGTTGGTGTATATTAACCGCTACTGTGCTAGATGGTGTATGAGCAGCACATATAGCATTTCCCTTATTGGGCTCCTCCTGATCAGTGCATATGTTGCGCTGTGTTAAGTGCTACATAGAAACAAATTCATGAACATACATAGTCTCAGAGTCCAGCACTCGTACATTCACATTCTGCAAAAGTCCTGACTGTTCCAGCCAGACATCTTAAGAGCAAGACGGAGACAGTAATAAAGAATGTTGTGTGAAGAGCAAAGGGCCTGTATGATGCTTTAACTAAACCAGGTCCCTCTTCActcatacaaaaacaaaaggctGAAGAGATGATTAATCTCTCTGAAAATCTTGAGAAGTTGTCTAGCTGGTTGTATCTGTAGTGTTTGAGTGTTCCTTTCCGGGCCTCTGCTGGCAGCTGACCTCCCCCGTCTCTGTATCTCCAATGTCTAAGTCTGGCTGATCCTCCGCTGTTGCTGCCACCGTCTCCGCCGCTGTtgctgccgccgccgccgccgccgctgctgctTCCTCTGTTGCTTCTCCCTCTGACACACCGGCACAGCAGGAGCACGCCTTGATGTCTATTGCCTTGGGCAGACATCCCTTCTTGAACCAGGGGTAGACCTCCACCAGCTCcttcttctgctcctctgaAAAGTGTGGCTGGTTCTTCTGCAGCAGCCTCAGCTTCTCTCGGTCCTGTCTGAGCACTCTCTGGATGTCaTTGATAAAGCGTTCGCTCTGGTCCATCTCCACGGCCCGTCCCTCGCTGCCGCTCGAGTGATCTTTGACCTTCTGGCTGTTCTGGGACGAGTCCACACTGCCAAAGTATTTACTACTGTTGTTGCTTCCTGAGAACACCCAAAGAGCACATTATTAATACTTTTgaaacaaagatgttttaatACAAAAAGACCGTATCATTAAAGGGTATATGCCAG
>TU158177
tatttagagaaaatgtaacaaaatatttgcaataaaaaagaagaagaaataagtCCGTTAAAATAACAAAGACAAATTCAGGAAATGTTTAATGTCTCAAATGACAGCATGAGCTTCAAAGTGGCGGAAAGCTCTCTACAGTCACTTGACATCTGTCTGAGCTACTTTACACCCGTGCAATAACCCTAAACTTAGACTTCTGAGGTGACCACACAAAACGGTAATGAGCTTCAGACACTTCCACAGGATGCTCAGAGAGGCTCTTTTCCATATTTATGAGGGGCAACATCAGACCATTCAAGTGTTATGTTGCACACTTTTAAAACTGCTGAAAACATCAATATTCTCCTCACTTTATATTTATCACCCACCATAAACAACATACTACTCTAGTATTTTTATAGTAATCATCTTGGTCTTGCTTGTTTTTTAAGCAGGCGTTTCCATAAAtaacttaaaaacacaaaaagtctcATACAGAAAacggtgtagcctatgtaaaaaaataaacgcTCAGAGTTACAAATATTCACACAAGCATTTAATAAGTTTCACAGCTGATAGTGAAATAAATGCTGAATGGAAATATGCATGAAGTGACTGGCAacttgaaaaatgcaaattttgAAGATGCTTTCTCagaaacaacataacatgatGGTTTGGTGAGTAGATGTAACTTTTACAGAACACGTTTCACCCGATTGTCCTTTTCTGAGTGCAGTCTCAAATGTGTTCAGCACCTCCACAGTGCCTGGGGATCAGTAACAAATGTacttttccattttatgctactatTCTTCTTGCATTGCATTTTCACTTCTACTTTAGTGAATAATGTGAGTAGGTTTTCCAGTCGGAAGCTTCACCAATTGCCGATGAGTCCATGCCTGGTCGCTGCTGTAAACGGGAGCAAGTTTGTTTTTTGCAATTTAATTTCCTAACTCGTGTTTTCCCTCTTCTTCCAGTGTAGCCCACAAGGTGCAATCATCCGTTCATTTGGTGCTTTAGGCTATTCATGACAGCAGTGTCTGGAACTTAACTCCACCTGCTCTCACCACATGCTGACGTAGCATGGTGTTGTTGTAACTGAGGAAATCGCGTCACAAAATGCTGAATTCATTCATTTACTGTAGAACATACAACACCACAGAGCCATTTCCTGACGTGCATGAAGCGGCCTCCAGTTGGTTGGTGTATATTAACCGCTACTGTGCTAGATGGTGTATGAGCAGCACATATAGCATTTCCCTTATTGGGCTCCTCCTGATCAGTGCATATGTTGCGCTGTGTTAAGTGCTACATAGAAACAAATTCATGAACATACATAGTCTCAGAGTCCAGCACTCGTACATTCACATTCTGCAAAAGTCCTGACTGTTCCAGCCAGACATCTTAAGAGCAAGACGGAGACAGTAATAAAGAATGTTGTGTGAAGAGCAAAGGGCCTGTATGATGCTTTAACTAAACCAGGTCCCTCTTCActcatacaaaaacaaaaggctGAAGAGATGATTAATCTCTCTGAAAATCTTGAGAAGTTGTCTAGCTGGTTGTATCTGTAGTGTTTGAGTGTTCCTTTCCGGGCCTCTGCTGGCAGCTGACCTCCCCCGTCTCTGTATCTCCAATGTCTAAGTCTGGCTGATCCTCCGCTGTTGCTGCCACCGTCTCCGCCGCTGTtgctgccgccgccgccgccgccgctgctgctTCCTCTGTTGCTTCTCCCTCTGACACACCGGCACAGCAGGAGCACGCCTTGATGTCTATTGCCTTGGGCAGACATCCCTTCTTGAACCAGGGGTAGACCTCCACCAGCTCcttcttctgctcctctgaAAAGTGTGGCTGGTTCTTCTGCAGCAGCCTCAGCTTCTCTCGGTCCTGTCTGAGCACTCTCTGGATGTCactgcagatacacacaaacacacaaacacagccacaATCAATCCTCTACCCAACAGTCGGTATCTGACAAACCTTTAGGAGGCCGGGGTTTGCAAATAAGTGGGTTGGATGATATATTCCTAATGTTGGAGAATCATTAATGGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158175 True 2126 lncRNA 0.43 3 23916758 23920029
TU158177 False 2056 lncRNA 0.43 2 23916758 23919254

Neighbor

gene id symbol gene type direction distance location
LOC120567818 gpr55,LOC103396173,LOC103366713 coding upstream 11229 23899208 ~ 23905529 (+)
snorc NA coding upstream 19847 23891144 ~ 23896911 (+)
gigyf2 gigyf2 coding upstream 25790 23870051 ~ 23890968 (+)
trnaw-cca_13 NA coding upstream 48433 23868254 ~ 23868325 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding upstream 96317 23816040 ~ 23820441 (+)
clcn2a clcn2,LOC102213982,LOC102290034 coding downstream 43920 23963949 ~ 24005011 (+)
LOC120568612 NA coding downstream 134750 24054779 ~ 24057075 (+)
LOC120569088 NA coding downstream 163667 24083696 ~ 24089942 (+)
cdc20 cdc20,LOC102779045 coding downstream 218126 24138155 ~ 24142097 (+)
bokb LOC103360102,LOC100707238 coding downstream 232131 24152160 ~ 24160339 (+)
G117355 NA non-coding upstream 827 23910522 ~ 23915931 (+)
G117346 NA non-coding upstream 17846 23898650 ~ 23898912 (+)
G117344 NA non-coding upstream 19112 23897243 ~ 23897646 (+)
G117320 NA non-coding upstream 60227 23856129 ~ 23856531 (+)
G117315 NA non-coding upstream 67812 23848687 ~ 23848946 (+)
G117364 NA non-coding downstream 9819 23929848 ~ 23933807 (+)
G117374 NA non-coding downstream 27897 23947926 ~ 23948202 (+)
G117385 NA non-coding downstream 62162 23982191 ~ 23982983 (+)
G117389 NA non-coding downstream 79825 23999854 ~ 24075315 (+)
G117398 NA non-coding downstream 99625 24019654 ~ 24021055 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 2260 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 8357 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 61601 23850879 ~ 23855157 (+)
LOC120567964 dpp6,LOC100710983 other upstream 230954 23592732 ~ 23685804 (+)
kdsr kdsr,LOC102792240 other upstream 475915 23433625 ~ 23440843 (+)
G117400 LOC104965054 other downstream 102412 24022441 ~ 24023659 (+)
LOC120569114 NA other downstream 129735 24049764 ~ 24054704 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 649499 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 747850 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 942967 24862996 ~ 24870087 (+)

Expression


Co-expression Network