G117507


Basic Information

Item Value
gene id G117507
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24213837 ~ 24216457 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158376
GGTAAATGTTGATGGTTAAGAGAGTGAAGCCCTTTAAtctgtaatttatttatcattAGACATTATAACATTATTCATACTGGTGAACAAGGACCACTTCTACAGAGGGACGTTCACAACAtacatattacattattatatacAGTGCAGTGCATTACAGTGGATCGTTATATGTGTATTACCGGGATGAAGGGAcgggaaaggaggaggagagagggtttgaggaaaggaggagaaggagaggagtgGTTGAAGGGTTAGGGTGAGTTGTGATAGTAAGTTGTCTTtttattacttctttttttttttaaaccacagtacagtttgttttataaaagttaAACCTATAGAGAGATAGAGTGTCACATTGTCACAGCTACTGTCAGGTGAACCTACTGGAAGTTGACTCTTGTGGGAATATCAAATGAGATACATTTTGTCATGAGATGCTATAGAGAGATGCTATAAAACATTCTAAGATAGTCAACCTCCTACCAGAGTGCGGAGACCCTGGAAGGCAGgccaaaggtcaaaggtcaaagatCAGATCAACGTGCATGCGTGCTGCAGACATTCAAACGTGTTCGGCCATCTAGAAAAATGGCCGACCCCCCGACTTTTTCTCCTTCTATGTTTAGGCATCATTTTTGGTGCTTTccctttttatatataaaaaatacaaaacataacaGCGAAAAGAATTCCGTTGGTTGTCCCGTTTTTTCTCCTGTTTCATTTTTCCAAAACTGTTTTATGTTCGttttcatttcaacatttggttgttgttttttttcccttttctcctCCAGTCACTTACATATTGACAAAGTATACAATATTTTACAACTGAACAAGACTGAAAGATAACATTTGATTTGTCCAATCAGATACAAGGCCCACATCCTATATCCAATTAGAGAAGTCAACTGGAAGCTAACCAGTAGTAAGCAACACAACAAGCCTATGGTGTGAAAGGAGCTGTCCGATTTCAGCTCTGCATTAACATGAGCACCCGCCCTCGGGGACAGTAGGCTCTGCCGGTTTGTCCAGCTTAATGTCGATCACTGTGAATCATTGCCTTCAGGATTTGCATCGTCCAAGCTTTCCATGCCAGGTAGGGCTGCTGCAACCCGACGAAACAGCTAGGAGGAGAGAAGATGAGGGTAGAgataagaggagaggagggagagatagaTCAGAAAAGATGAAAACAAGATGAAAATGGAGGAGAAAACAGGGAGAGAATGCAAGAGAGGATAGAAAGGGGgtttaaaatgtgcaaaaatgtatattacatTTGTCCTGTATGGACTACAGCCCTTATTATGTGTTTTTCTATCCTCCACACTTGTTAccactttttccacatatttCTACATAGAAATTCTATCTATTCATGTTGGTGGCTTGATCACCTTGGGAGGACACAGAAACAACAGAAAAGCTGGGAGCAGCTGATGCCCAAAATGCTGTGAAATATGGTGAAACTGCAGGGATCACCTGTTTGACATTGCAGCCTGTCTTGGCACTGGTCTCAATGAACATGACGTTCAGCTCTTTGGCTCTTTGCTCTCCTTCCTCAATCATGATTTGCCTGCAGGATAATCAGGCCAGACTCATCACAAAGTTGAAGGATCATTTATTCAGTACTGACATGTTGCTTTTAACGACAAAATATCTTCATGCCAAAGACTACATGAAGCTAAATGTTGCATGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158376 True 1720 lncRNA 0.41 2 24213837 24216457

Neighbor

gene id symbol gene type direction distance location
agxtb LOC102295305,LOC101480149,LOC103360104,LOC102780675 coding downstream 45194 24164841 ~ 24168643 (-)
thap4 thap4 coding downstream 49115 24160863 ~ 24164722 (-)
elovl1a LOC103360100,LOC100706973,LOC101078198 coding downstream 66727 24142316 ~ 24147110 (-)
ppp1r7 ppp1r7,LOC102778584 coding downstream 132597 24072721 ~ 24081240 (-)
ubxn7 ubxn7,LOC102778291 coding downstream 142043 24063157 ~ 24071794 (-)
tnn tnn coding upstream 366435 24582892 ~ 24650188 (-)
LOC120568222 NA coding upstream 653545 24870002 ~ 24874965 (-)
arl14 LOC104951466,LOC103365161 coding upstream 703973 24920430 ~ 24921389 (-)
ppm1la LOC103365160,LOC100694563,LOC104951467,LOC101471328 coding upstream 708123 24924580 ~ 24933813 (-)
tal1 LOC100710637,LOC101065935,LOC105935913 coding upstream 727203 24943660 ~ 24949323 (-)
G117505 NA non-coding downstream 1612 24209549 ~ 24212225 (-)
G117501 NA non-coding downstream 14275 24195307 ~ 24199562 (-)
G117372 NA non-coding downstream 273043 23940225 ~ 23940794 (-)
G117369 NA non-coding downstream 275730 23934919 ~ 23938107 (-)
G117343 NA non-coding downstream 316926 23895975 ~ 23896911 (-)
G117514 amotl2 non-coding upstream 24164 24240621 ~ 24242247 (-)
G117553 NA non-coding upstream 122625 24339082 ~ 24462553 (-)
G117564 NA non-coding upstream 339958 24556415 ~ 24556706 (-)
G117589 cacybp non-coding upstream 457429 24673886 ~ 24675754 (-)
G117596 plk3 non-coding upstream 466400 24682857 ~ 24686632 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 357216 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 722225 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 782845 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 852257 23345718 ~ 23361580 (-)
G116969 NA other downstream 1945278 22261998 ~ 22268559 (-)
G117560 NA other upstream 282923 24499380 ~ 24536496 (-)
G117732 NA other upstream 705746 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2099313 26315770 ~ 26319595 (-)
G118175 NA other upstream 2445164 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 2603381 26819838 ~ 26824570 (-)

Expression


Co-expression Network