LOC120569045 (cacybp)


Basic Information

Item Value
gene id LOC120569045
gene name cacybp
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24667879 ~ 24675754 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158470
aaggaggaggaggacgttATTCTGTGGAAGATCATCTTTGGAGAAAGTAACGTTACGTGCAGACTCACTCAGGAAGAGGACACAATCACATTTCTGAACCTAGCTAACATAACTGATAAAGCCTGAATGGATCTTACCGAACAGATCAACCAGTTGGAGGCAGATTTGCTGGAGCTGGGGTCACTCCTGGAGAaggcagagaggaaaagagTGCAGGAGCTGCTAAAGCAGGAGCAGCAGAAGGTGGAGAAGGAGCTTTCAGTCAAACGACAACAGAAGGAGAAACAAGCCATGAGAGAAGCAGACCGACCTCTTGCCTCTAAAGGAGCGTACACAGTCAAGATCAACAGCTATGATAAAAACAGACATGATCCTGGTCATGTGCAAGAAACAGGCAACAAAGAAGTGGGAGTGCCTAACAACAGTGGAAAAGCAGTCAAAAGAGAAAGATAAGCCCAATATTGATGAGAGTGCAGACCCCAGCGATGGACTGATGACCATGCTGAAGAAGATTTACTCGGAGGGAGACGACGAGATGAAGAGAACCATCAACAAAGCCTGGTCAGAGTCCCAAGAGAAGAAAAttcgaggaggaggagaagacatGATGGACATCTGAACTGCCCTCGCTGCGTGTCCACCTGACATGACTTGAATATGAAATGTTACGTGGACATTTCCACAAAATCTATAAATTCAGTGTACAGCTCATATATAAAGGTTCAGGATTAATGTCTAAGCCCCGGAAGGCCTCATTTTGACCATGCTTTGAAAATCAGGCTGCCGATGTCCTGATAGTCATAGACCATGAAGGCTCGGAAAATATGTGTACGAGCATAATGGCAGTGTCCAGCAGATGGCAACCTAACagcaaaatatatacacatttcatcacctttttttttttgtaatgtcaGATTTGATGGGTTAAAGGACCACAatgcagttgtttttttcttgagaTTAATGTCCATTAGTAATTCATAGTTCAAATTGGACCTGGGTAAATTTAATATGTGAGACGTGTTCTGTAAAGTCACATGTTAATATTGTTCCTTTGCAGAATTCAGTGCAGCTAAACTAAGCTGATATTTAAGATGTTTCCAAGTGTACATTTGCCAAAGTCATGCTCATATTCCTTTAACGAAGAGAACCAAAGGGCTCTTCTGGCTTCTCTTCTGGCGTCTTCATATCAGctgtttttggggggttttcttTTGTCATTCCATAAATTGCTCAAATGATAGCTGCAAAGACAGCACTGCTCACGCATCAGTCCAGTGTAATAATTCACATTACTGCATAGGTCTGTGTTTGACAGATTTAATGTATTTTACCCATTCCTGTTGGCATAGCTTAATGCTCTGAAACACTTTCTTTGTAATTCTTTAATATGACTGTTAGATTTTCATTGTGTTGGACAGTTTCCCACTATAATTTCTATTTACAGCACTGTTGAAGTTGCCCATTTCCCTCCAGCTTTTGGGAATAtctaaaatgtatgtttaattATGTTGATTTTTTACCCTGGCTTTTGTCATTGTCTTACATGTATTGTTGTCTGCCCTCAAACAAGTTCTCACAAATATAGATCTTGAACTGA
>TU158471
GTGAAATTCGAGAAATGTGAGCATTTCGTAGTCCTTTTCTTGCCCACTGCTGAATTCAGGCTCAGTGTTGACTTGCATTGTACCCTTGGTTCAATCTGCTTACTTCTGGTAGAAAATAGAGCAACTGATTCTTGTGACCGTCTTTTCTCCCTTCAACAGATAAAAACAGACATGATCCTGGTCATGTGCAAGAAACAGGCAACAAAGAAGTGGGAGTGCCTAACAACAGTGGAAAAGCAGTCAAAAGAGAAAGATAAGCCCAATATTGATGAGAGTGCAGACCCCAGCGATGGACTGATGACCATGCTGAAGAAGATTTACTCGGAGGGAGACGACGAGATGAAGAGAACCATCAACAAAGCCTGGTCAGAGTCCCAAGAGAAGAAAAttcgaggaggaggagaagacatGATGGACATCTGAACTGCCCTCGCTGCGTGTCCACCTGACATGACTTGAATATGAAATGTTACGTGGACATTTCCACAAAATCTATAAATTCAGTGTACAGCTCATATATAAAGGTTCAGGATTAATGTCTAAGCCCCGGAAGGCCTCATTTTGACCATGCTTTGAAAATCAGGCTGCCGATGTCCTGATAGTCATAGACCATGAAGGCTCGGAAAATATGTGTACGAGCATAATGGCAGTGTCCAGCAGATGGCAACCTAACagcaaaatatatacacatttcatcacctttttttttttgtaatgtcaGATTTGATGGGTTAAAGGACCACAatgcagttgtttttttcttgagaTTAATGTCCATTAGTAATTCATAGTTCAAATTGGACCTGGGTAAATTTAATATGTGAGACGTGTTCTGTAAAGTCACATGTTAATATTGTTCCTTTGCAGAATTCAGTGCAGCTAAACTAAGCTGATATTTAAGATGTTTCCAAGTGTACATTTGCCAAAGTCATGCTCATATTCCTTTAACGAAGAGAACCAAAGGGCTCTTCTGGCTTCTCTTCTGGCGTCTTCATATCAGctgtttttggggggttttcttTTGTCATTCCATAAATTGCTCAAATGATAGCTGCAAAGACAGCACTGCTCACGCATCAGTCCAGTGTAATAATTCACATTACTGCATAGGTCTGTGTTTGACAGATTTAATGTATTTTACCCATTCCTGTTGGCATAGCTTAATGCTCTGAAACACTTTCTTTGTAATTCTTTAATATGACTGTTAGATTTTCATTGTGTTGGACAGTTTCCCACTATAATTTCTATTTACAGCACTGTTGAAGTTGCCCATTTCCCTCCAGCTTTTGGGAATAtctaaaatgtatgtttaattATGTTGATTTTTTACCCTGGCTTTTGTCATTGTCTTACATGTATTGTTGTCTGCCCTCAAACAAGTTCTCACAAATATAGATCTTGAACTGA
>XM_039816862.1
aaataaacaagaagaaggaggaggaggacgttATTCTGTGGAAGATCATCTTTGGAGAAAGTAACGTTACGTGCAGACTCACTCAGGAAGAGGACACAATCACATTTCTGAACCTAGCTAACATAACTGATAAAGCCTGAATGGATCTTACCGAACAGATCAACCAGTTGGAGGCAGATTTGCTGGAGCTGGGGTCACTCCTGGAGAaggcagagaggaaaagagTGCAGGAGCTGCTAAAGCAGGAGCAGCAGAAGGTGGAGAAGGAGCTTTCAGTCAAACGACAACAGAAGGAGAAACAAGCCATGAGAGAAGCAGACCGACCTCTTGCCTCTAAAGGAGCGTACACAGTCAAGATCAACAGCTATGATGTGAAATTCGAGAAATGTGAGCATTTCGTAGTCCTTTTCTTGCCCACTGCTGAATTCAGGCTCAGTGTTGACTTGCATTGTACCCTTGGTTCAATCTGCTTACTTCTGGTAGAAAATAGAGCAACTGATTCTTGTGACCGTCTTTTCTCCCTTCAACAGATAAAAACAGACATGATCCTGGTCATGTGCAAGAAACAGGCAACAAAGAAGTGGGAGTGCCTAACAACAGTGGAAAAGCAGTCAAAAGAGAAAGATAAGCCCAATATTGATGAGAGTGCAGACCCCAGCGATGGACTGATGACCATGCTGAAGAAGATTTACTCGGAGGGAGACGACGAGATGAAGAGAACCATCAACAAAGCCTGGTCAGAGTCCCAAGAGAAGAAAAttcgaggaggaggagaagacatGATGGACATCTGAACTGCCCTCGCTGCGTGTCCACCTGACATGACTTGAATATGAAATGTTACGTGGACATTTCCACAAAATCTATAAATTCAGTGTACAGCTCATATATAAAGGTTCAGGATTAATGTCTAAGCCCCGGAAGGCCTCATTTTGACCATGCTTTGAAAATCAGGCTGCCGATGTCCTGATAGTCATAGACCATGAAGGCTCGGAAAATATGTGTACGAGCATAATGGCAGTGTCCAGCAGATGGCAACCTAACagcaaaatatatacacatttcatcacctttttttttttgtaatgtcaGATTTGATGGGTTAAAGGACCACAatgcagttgtttttttcttgagaTTAATGTCCATTAGTAATTCATAGTTCAAATTGGACCTGGGTAAATTTAATATGTGAGACGTGTTCTGTAAAGTCACATGTTAATATTGTTCCTTTGCAGAATTCAGTGCAGCTAAACTAAGCTGATATTTAAGATGTTTCCAAGTGTACATTTGCCAAAGTCATGCTCATATTCCTTTAACGAAGAGAACCAAAGGGCTCTTCTGGCTTCTCTTCTGGCGTCTTCATATCAGctgtttttggggggttttcttTTGTCATTCCATAAATTGCTCAAATGATAGCTGCAAAGACAGCACTGCTCACGCATCAGTCCAGTGTAATAATTCACATTACTGCATAGGTCTGTGTTTGACAGATTTAATGTATTTTACCCATTCCTGTTGGCATAGCTTAATGCTCTGAAACACTTTCTTTGTAATTCTTTAATATGACTGTTAGATTTTCATTGTGTTGGACAGTTTCCCACTATAATTTCTATTTACAGCACTGTTGAAGTTGCCCATTTCCCTCCAGCTTTTGGGAATAtctaaaatgtatgtttaattATGTTGATTTTTTACCCTGGCTTTTGTCATTGTCTTACATGTATTGTTGTCTGCCCTCAAACAAGTTCTCACAAATATAGATCTTGAACTGAT

Function

symbol description
cacybp Predicted to enable S100 protein binding activity; tubulin binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in heart development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human CACYBP (calcyclin binding protein).

GO: NA

KEGG:

id description
K04507 CACYBP, SIP; calcyclin binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU158470 False 1603 TUCP 0.41 4 24667893 24675753
TU158471 False 1407 TUCP 0.39 2 24673924 24675753
XM_039816862.1 True 1779 mRNA 0.41 4 24667879 24675754

Neighbor

gene id symbol gene type direction distance location
mrps14 mrps14,LOC101476193 coding upstream 5815 24660132 ~ 24662064 (+)
tnr tnr coding upstream 122119 24374289 ~ 24545760 (+)
LOC120568202 NA coding upstream 389801 24269684 ~ 24278078 (+)
LOC120568201 NA coding upstream 400593 24259463 ~ 24267286 (+)
LOC120568200 NA coding upstream 410544 24253388 ~ 24257335 (+)
plk3 plk3 coding downstream 1229 24676983 ~ 24685579 (+)
eif2b3 eif2b3 coding downstream 83411 24759165 ~ 24797248 (+)
ptch2 ptch2 coding downstream 132490 24808244 ~ 24837694 (+)
kif2c kif2c,LOC101470919 coding downstream 178040 24853794 ~ 24861945 (+)
LOC120568223 NA coding downstream 199247 24875001 ~ 24876959 (+)
G117547 NA non-coding upstream 111222 24556419 ~ 24556657 (+)
LOC120568139 NA non-coding upstream 328623 24337693 ~ 24339256 (+)
G117523 NA non-coding upstream 409048 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 497926 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 498324 24164854 ~ 24169555 (+)
G117632 NA non-coding downstream 162202 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 442477 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 450077 25125831 ~ 25130929 (+)
LOC120568901 NA non-coding downstream 1106421 25782175 ~ 25793191 (+)
LOC120568900 NA non-coding downstream 1196575 25872329 ~ 25873402 (+)
LOC120568789 kiaa0040,LOC102782613 other upstream 89567 24569528 ~ 24578312 (+)
LOC120569114 NA other upstream 613175 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 644220 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 753381 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 759478 23905870 ~ 23908401 (+)
selenot1a selenot,LOC103365166 other downstream 187242 24862996 ~ 24870087 (+)
G117664 NA other downstream 274814 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 311745 24987499 ~ 25044057 (+)
LOC120568894 LOC102789372,LOC104966552 other downstream 1067573 25743327 ~ 25773468 (+)
LOC120568895 NA other downstream 1098023 25773777 ~ 25793954 (+)

Expression


Co-expression Network