G117788


Basic Information

Item Value
gene id G117788
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 25350226 ~ 25373646 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158772
AAGATTTCAGGTACAACAGCAAATGAGACATTTGTAATTTTCAACCTCTTTCTGGCATCTATCTTCGACATAAGCACAAACTCTCCATAGATTTCTGATAACAACAAAACCAAAGTACATAAAAACGAGAATTAAAAGTACTTTGTTCCTCATAAATTGGCACCTTTAAGAAATTCCTCGTATTCAACAAACGGTGTAGAATAAAGCCGTCTTTAAATGGTGGGATAACCGGCTTTGCATGTTTCCACCTAATGAATGAGTGCAGGATTAAGGTGCACACACTGATTTAAGATCAGCACTCCACAACCTTTCTTCCTGCCTCTTTGTTTTTACACTGTTTCACCATAGTTGAACAGGAGACGTCTTGCTGGGCCATATCTATCTGCATACGCACATCCCCAATCAATAGTCGTTTTTGGAAGGTGTTGACTCACATATTGATCGACCATCTTGTGATGTCTATGTGCAGACAATGCCATTCATTGGCCTCATAAAAGTGCAGGTTTTATAAAAGGGAGGGGGACTTTGAGCAACAAATTAATGAGATCAaaaggtggaggaggagagaaggaggggaggGTTGGGGGGTTGTGCAAATTTCAGCCGATGACATTGTGAGGCAGTCATTGAAACTGAAGTTGTGAGTCGCAAGTTGTCTTTGAATTGGAATGTCACCATCACAGTTGGAGTCATTTCTCATTCTTTACAGGGCTTAATGTGGACTTTCACATTCAAATTCAGATTTGTCTAGAGGGTCACAAAAAGAAGACTAATGTAGTGCTCTTACTAATTGTTCTTTGTTCAATATGTGTATTTTTCCCCTATCTAATATCATTATATCTCTGTTTTTGAATCTAAAAATGGACCCCAACCCTAGACAAAATGGCAAAGGCAGTCACAGGCAGATTTCTTTAACCAGGGActaacagaaagacagacacacgccgcacatagacacacatacgcacagcAAACATTAATTAAGCAAGtcgagaggaaaaaaaagaaaatatcatCAAAGTAACATGTCAGGTAACACTTGACAACAGCCTCACCTATTTTCAGAGCAGTAATTAACCAAGTATCTAACAGATGTGGTTCTCAAAATTTGACAGAGCCTCCAACAACTTAATCGGAGCTGCAGTATTATCAACTGTCAGATgcatatagtttttttttctcattaaatGAATCATGGTGGATTGTCCCAACGTGCAACTAAAGCAGTGATGTATTTTAAAACTATGTGTCAATTCCCGTCCTCCAAATTAAATGTATCTGTCACATACAATACTGACAAGCAGAGATACCATCAATACGGATTAGGATTGGTTGAAAATCCAATTTTTGGTGGGGGAAAAATGAGCTATATTCATCTCCCGTTGCTGTCAGTTGTATCGCACTAAGTCAGACAATGTTAGTCCGatacattttaatacatttcatttCCGTGCCCTCCAAACAAGGTTTATAAAGGCTCTATCATCTGTCCCTCTTTTGCTCTATCAATCAAAGACAAgtccacacattcacacacaaatatacacacatgcaagcaTCGTCCCATCATCCTGTCCACACGTGTGGTATGTTTTCTCCCCAACAAGCATTCTCATCAGGAAAAGCCTTAAAACTGTGTTCCCGCAACATTCCCAATAAGGTTGACACATAATGAAACAGTGTCATTGTCATATTGCCTTGCCACCATAACAACTGAAGAAGCATGAGGGACGCTTTAAAGGTCGTTATAACTGATGAGCGGGGAGGAGGGTAGCGGGAGTAGGGGGTGGGAATAAAGAGGCACTGATATAGAAAAGTTTGCAGAGAAAGGGAAGGCAGATATGGATACGCGATGACAGATGATGAATGAAATAAGAGTTATAGCATAAGATGCCGGCCGTTATAAAATTTGGATAGCTaactggtgatttttttttttttcttctggaaAACAACCAAAAGCATGTACACTGTTGTGTCTGCCATACAAATAGGTAAGTACGATACAAAGACGTGCATGGTGTGGCTGTTACTGTGATATGGATCATTGCTGCAATGAGACAAAAACGCAAGCTGCAATTTCGATGCTAATCACAGGAGCACTGGGCCTTTGCAGGGAACACACAAAATTATGCATATTATATTGTTGCTCTGCTGTGCACATAAAAAGaatactgaaaagaaaaaaaaaaaagcgctaCATGACAGCAGTGTTTTTGCTTCCGTGTACATTTCTGTTCTGCTACACGTTTCCAACATCGTGAACTGTCAATCCTTTGCCGTGATGGCAATCTTAAACTGACACCCCCATTCCACATACAGCGCTCTATAGTGGGAAGATGCTGTCATCTGAGACCTGGCCCGGCCCAGCATGTGTTATGGTTACACCAGACTCTCGAGTTGATCCCACACAGCCGGCAGAgtctggagagagggagagagagggagatctGCCCCAGCAGAGGGAATGTAGGGATGAGCGGATGGATAGAGTGGCTGACGGGTCACGTTACTCCCACATTAGACGATCATGtcagtgtgaatgtgatcaCGGCTATTATTACAGCTTACATGATGAAATGGCTAAAAAGTGCTGACGCCGAGTGCTCGCATCCTTgctgtgagagagtgtgtgttgagAGTGTAATCATATTGTGAGGCTTAATGCATTAAGAGGTCTGCTGGGTCGTGCTGTCCAGATTATCCTCCTTTAAAAAGTCATCAATATTGTATTTCATTTAAGTTTGTGGTTCATCTATATTTTCTATAAATATTGGGGAGTGATTAAACCACTCTGGGCTCTGTAATGGGTTATTGATCAATAAATAATTCTACTGAACACAAGTgccgttttaaaaaaaaaggagtggaATAACAAATATATGTATCTAAGCGCCACTGCAAAGCCCcattctccctctccctgtggTGTCAACACCAACATACTGTGAGCAATATAGTCTTACACATGTCTTAGGTAGATATAATCTCAGAGAACCCAAAAACCAGAAACAAAACATTAGACGATGTGCAAAGACCAGCTCTAATGGTGTCATAATATagcaagaaataaaagaaaagagcagAACCAAAACATTTATGAATACTCATAATTCCATTTTCTTCTAATCCAAAACCAAAAGGAAGTCCGTCCAagtgatttttgttgtttttttccttacaCTTAGTATTTAGTTTTGGCAAAGTAACTAACCCccaacttctcctccctcccctttcAGACTCTCCCCAACCTCCGTGTCCCAAACTCAGTCCCAGTTGGTAGATTCCCCGTCAATTATCGCCGGAGCAGCAAAATAAGTAGTGGAAGCAGGTAAATGGTAATGCAGGGGAGGTTCTGCTTGGCGTGGTTTCCTTTCACCCCTTCGTTAACTGGAGGGGGTTGAAAGAATTTGGGTCGGTCGGTGATGGGGACAAGGCGTGGGCCACGGGAACACATATCGTCGGCGCACATGCCGCTTCCTGAACCG
>TU158773
gttgggggggggggGGTTGTGCAAATTTCAGCCGATGACATTGTGAGGCAGTCATTGAAACTGAAGTTGTGAGTCGCAAGTTGTCTTTGAATTGGAATGTCACCATCACAGTTGGAGTCATTTCTCATTCTTTACAGGGCTTAATGTGGACTTTCACATTCAAATTCAGATTTGTCTAGAGGGTCACAAAAAGAAGACTAATGTAGTGCTCTTACTAATTGTTCTTTGTTCAATATGTGTATTTTTCCCCTATCTAATATCATTATATCTCTGTTTTTGAATCTAAAAATGGACCCCAACCCTAGACAAAATGGCAAAGGCAGTCACAGGCAGATTTCTTTAACCAGGGActaacagaaagacagacacacgccgcacatagacacacatacgcacagcAAACATTAATTAAGCAAGtcgagaggaaaaaaaagaaaatatcatCAAAGTAACATGTCAGGTAACACTTGACAACAGCCTCACCTATTTTCAGAGCAGTAATTAACCAAGTATCTAACAGATGTGGTTCTCAAAATTTGACAGAGCCTCCAACAACTTAATCGGAGCTGCAGTATTATCAACTGTCAGATgcatatagtttttttttctcattaaatGAATCATGGTGGATTGTCCCAACGTGCAACTAAAGCAGTGATGTATTTTAAAACTATGTGTCAATTCCCGTCCTCCAAATTAAATGTATCTGTCACATACAATACTGACAAGCAGAGATACCATCAATACGGATTAGGATTGGTTGAAAATCCAATTTTTGGTGGGGGAAAAATGAGCTATATTCATCTCCCGTTGCTGTCAGTTGTATCGCACTAAGTCAGACAATGTTAGTCCGatacattttaatacatttcatttCCGTGCCCTCCAAACAAGGTTTATAAAGGCTCTATCATCTGTCCCTCTTTTGCTCTATCAATCAAAGACAAgtccacacattcacacacaaatatacacacatgcaagcaTCGTCCCATCATCCTGTCCACACGTGTGGTATGTTTTCTCCCCAACAAGCATTCTCATCAGGAAAAGCCTTAAAACTGTGTTCCCGCAACATTCCCAATAAGGTTGACACATAATGAAACAGTGTCATTGTCATATTGCCTTGCCACCATAACAACTGAAGAAGCATGAGGGACGCTTTAAAGGTCGTTATAACTGATGAGCGGGGAGGAGGGTAGCGGGAGTAGGGGGTGGGAATAAAGAGGCACTGATATAGAAAAGTTTGCAGAGAAAGGGAAGGCAGATATGGATACGCGATGACAGATGATGAATGAAATAAGAGTTATAGCATAAGATGCCGGCCGTTATAAAATTTGGATAGCTaactggtgatttttttttttttcttctggaaAACAACCAAAAGCATGTACACTGTTGTGTCTGCCATACAAATAGGTAAGTACGATACAAAGACGTGCATGGTGTGGCTGTTACTGTGATATGGATCATTGCTGCAATGAGACAAAAACGCAAGCTGCAATTTCGATGCTAATCACAGGAGCACTGGGCCTTTGCAGGGAACACACAAAATTATGCATATTATATTGTTGCTCTGCTGTGCACATAAAAAGaatactgaaaagaaaaaaaaaaaagcgctaCATGACAGCAGTGTTTTTGCTTCCGTGTACATTTCTGTTCTGCTACACGTTTCCAACATCGTGAACTGTCAATCCTTTGCCGTGATGGCAATCTTAAACTGACACCCCCATTCCACATACAGCGCTCTATAGTGGGAAGATGCTGTCATCTGAGACCTGGCCCGGCCCAGCATGTGTTATGGTTACACCAGACTCTCGAGTTGATCCCACACAGCCGGCAGAgtctggagagagggagagagagggagatctGCCCCAGCAGAGGGAATGTAGGGATGAGCGGATGGATAGAGTGGCTGACGGGTCACGTTACTCCCACATTAGACGATCATGtcagtgtgaatgtgatcaCGGCTATTATTACAGCTTACATGATGAAATGGCTAAAAAGTGCTGACGCCGAGTGCTCGCATCCTTgctgtgagagagtgtgtgttgagAGTGTAATCATATTGTGAGGCTTAATGCATTAAGAGGTCTGCTGGGTCGTGCTGTCCAGATTATCCTCCTTTAAAAAGTCATCAATATTGTATTTCATTTAAGTTTGTGGTTCATCTATATTTTCTATAAATATTGGGGAGTGATTAAACCACTCTGGGCTCTGTAATGGGTTATTGATCAATAAATAATTCTACTGAACACAAGTgccgttttaaaaaaaaaggagtggaATAACAAATATATGTATCTAAGCGCCACTGCAAAGCCCcattctccctctccctgtggTGTCAACACCAACATACTGTGAGCAATATAGTCTTACACATGTCTTAGGTAGATATAATCTCAGAGAACCCAAAAACCAGAAACAAAACATTAGACGATGTGCAAAGACCAGCTCTAATGGTGTCATAATATagcaagaaataaaagaaaagagcagAACCAAAACATTTATGAATACTCATAATTCCATTTTCTTCTAATCCAAAACCAAAAGGAAGTCCGTCCAagtgatttttgttgtttttttccttacaCTTAGTATTTAGTTTTGGCAAAGTAACTAACCCccaacttctcctccctcccctttcAGACTCTCCCCAACCTCCGTGTCCCAAACTCAGTCCCAGTTGGTAGATTCCCCGTCAATTATCGCCGGAGCAGCAAAATAAGTAGTGGAAGCAGGTAAATGGTAATGCAGGGGAGGTTCTGCTTGGCGTGGTTTCCTTTCACCCCTTCGTTAACTGGAGGGGGTTGAAAGAATTTGGGTCGGTCGGTGATGGGGACAAGGCGTGGGCCACGGGAACACATATCGTCGGCGCACATGCCGCTTCCTGAACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158772 True 3491 lncRNA 0.41 2 25350226 25353750
TU158773 False 2919 lncRNA 0.42 3 25350226 25373646

Neighbor

gene id symbol gene type direction distance location
LOC120568225 LOC103359193 coding downstream 214267 25114378 ~ 25135959 (-)
LOC120568128 col4a3,LOC103359191 coding downstream 264877 25055225 ~ 25085349 (-)
LOC120568136 NA coding downstream 348444 24997381 ~ 25001782 (-)
zgc:110366 LOC100711167,LOC101466938,LOC102200702,LOC102788500 coding downstream 357616 24987589 ~ 24992610 (-)
si:ch211-13f8.1 kiaa1614,LOC102789281 coding downstream 385262 24950498 ~ 24964964 (-)
pax3a LOC103356872 coding upstream 521992 25895638 ~ 25917773 (-)
LOC120568965 LOC104919208,LOC101171526,LOC104966176,LOC103396005,LOC101079252 coding upstream 589727 25963373 ~ 25968420 (-)
LOC120568966 LOC104919207,LOC103356876,LOC108245539 coding upstream 599085 25972731 ~ 25988947 (-)
LOC120567824 LOC106676181,LOC105890570,LOC105912786,LOC106632393 coding upstream 678453 26052099 ~ 26058572 (-)
map6d1 NA coding upstream 822197 26195843 ~ 26203560 (-)
G117786 LOC103359187,LOC104951523,LOC101067506 non-coding downstream 15013 25281408 ~ 25335213 (-)
LOC120568137 NA non-coding downstream 302212 25023401 ~ 25048014 (-)
G117718 NA non-coding downstream 457767 24876086 ~ 24892459 (-)
G117716 NA non-coding downstream 481795 24863009 ~ 24868431 (-)
G117616 eif2b3 non-coding downstream 552970 24787583 ~ 24797256 (-)
G117812 NA non-coding upstream 219397 25593043 ~ 25593585 (-)
G117813 NA non-coding upstream 220627 25594273 ~ 25594757 (-)
LOC120568899 NA non-coding upstream 455147 25828793 ~ 25829864 (-)
G117875 NA non-coding upstream 497679 25871325 ~ 25872253 (-)
G117890 acsl3,LOC102195906,LOC108245538,LOC100696941,LOC102792450,LOC103356873 non-coding upstream 563959 25937605 ~ 25938510 (-)
G117732 NA other downstream 426908 24922203 ~ 24923318 (-)
G117560 NA other downstream 813730 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 1493605 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 1858614 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 1919234 23430366 ~ 23430992 (-)
camk2n1a camk2n2 other upstream 942124 26315770 ~ 26319595 (-)
G118175 NA other upstream 1287975 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 1446192 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 2269681 27643327 ~ 27675360 (-)
G118524 NA other upstream 2339821 27713467 ~ 27718759 (-)

Expression


Co-expression Network