LOC120568895


Basic Information

Item Value
gene id LOC120568895
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 25773777 ~ 25793954 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158810
ACATCACAACTTCTTCACCCACTGTCTCTTCAGCACCAAATACAACATCTACACTGATGGAAGGGAGTACAACGTCAGCATCTAGGCCTACTGTCTCTGTTACTACAGCAACCAGCCAAACAAGCAGCAGCTCACCTAcaccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctccccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactTTACcagtctcaccagcagataacagcacaactttaccagtctcc
>TU158814
ACATCACAACTTCTTCACCCACTGTCTCTTCAGCACCAAATACAACATCTACACTGATGGAAGGGAGTACAACGTCAGCATCTAGGCCTACTGTCTCTGTTACTACAGCAACCAGCCAAACAAGCAGCAGCTCACCTACACCAGCAGATAATagcacaactttaccagtctcaccagcagagaacagcacaactttaccagtctcaccagcagagaacaacacaactttaccagtctccccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctccCCACCAGATAACAGCACAACCATACCAGTCTCCccagcagataacagcacaactttaccagtctccccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactTTACcagtctcaccagcagataacagcacaactttaccagtctcc
>XM_039816642.1
GTACTATTCTCATCAGCAGTGTGCCGTATAAAAAAGCCTTCTCAACACTCAGCAGCCATACAGAGTCATGGATCGGTTTACATTGTACTTCTCTCTCCTGTTGGCGTTCCTACTTTATGATGcTCAACCAGCAGCTCCAACAGGCTGTGCAGGTCCACCCGTGCTGTGTTGTCCTGGTCAAAACAACTCCTGCTTCAGAGGATGTTTCTGTGATAACGCCTGCTTGAATATAGGCGACTGCTGTCCGGACTACATTTCAACCTGCACGCAACCACCAAATACAACATCTACACTGATGGAAGGGAGTACAACGTCAGCATCTAGGCCTACTGTCTCTGTTACTACAGCAACCAGCCAAACAAGCAGCAGCTCACCTACACCAGCAGATAATagcacaactttaccagtctcaccagcagagaacagcacaactttaccagtctcaccagcagagaacaacacaactttaccagtctccccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctcaccagcagataacagcacaactttaccagtctccCCACCAGATAACAGCACAACCATACCAGTCTCCccagcagataacagcacaactttaccagtctccCCACCAGATAACAGCACAACATTATCTACAGACTCTATTTCTCCAAATCCCCGCACAACAAACAGCAGTACTATCTCTACACTTATAAATACCAGTACAACTTCAGCACCCACAGCTTCTGACACATCACCACCAAGCACAAGAACTACACCCTCAGATACCCCCCCATCTCCGTCATCTGCAGTGTCTTCAACAACAGAACACAGTACGACAAGCAGCACTACTGCAGCTACAGATGCTCATATAGTGACTATTTACCTGAAAGCTTCTGTTTTATCCCAGAATGAGGACAATGAAGATGTGATTTTCGAGAATTTATCCAATTTTATTTCCCAGACCCTTCTCCAGCTGAACTGTGAGGGCTGCTCATCAACTATCAGACACATCAAACGCACCTGAGAAAGGCCAATGTCTCAGCTAACTGTGAAATGTTTTAGCATGTAAAATGATATGCAGTATTATAAAGCTCACACAGGTACATATCACAACTTAATGCTACAACATCGACCGATTACACAGTTCATGTTCACATTAAAAAGTATAAACGCATGTATCAAATACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158810 False 305 lncRNA 0.47 3 25775891 25793954
TU158814 False 536 TUCP 0.47 3 25775891 25793954
XM_039816642.1 True 1240 mRNA 0.45 6 25773777 25777677
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120568352 ephb1,LOC103359190,LOC105935923,LOC107384019,LOC106599529,LOC106907045 coding upstream 216145 25376185 ~ 25557632 (+)
LOC120568394 LOC103359187 coding upstream 419994 25281304 ~ 25353783 (+)
gpc5c LOC103359185,LOC104919215 coding upstream 511436 25140737 ~ 25262341 (+)
LOC120568127 NA coding upstream 659975 25085974 ~ 25113802 (+)
extl2 extl2 coding upstream 777575 24992144 ~ 24996202 (+)
LOC120568896 NA coding downstream 14067 25808021 ~ 25811280 (+)
acsl3b LOC103356873,LOC102195906 coding downstream 137587 25931541 ~ 25944450 (+)
scg2b LOC104966178,LOC102792743 coding downstream 165852 25959806 ~ 25963171 (+)
LOC120568964 dhrs12,LOC103356877,LOC100697743 coding downstream 174656 25968610 ~ 25972306 (+)
LOC120567653 LOC104919205,LOC102308383,LOC100712433,LOC101483053,LOC102214738,LOC102794313,LOC104966180,LOC103396000,LOC106528146,LOC108245529,LOC102232174,LOC103479388 coding downstream 206268 26000222 ~ 26046169 (+)
LOC120568228 NA non-coding upstream 642848 25125831 ~ 25130929 (+)
G117704 NA non-coding upstream 655275 25118231 ~ 25118502 (+)
G117632 NA non-coding upstream 935548 24837956 ~ 24838229 (+)
G117547 NA non-coding upstream 1217120 24556419 ~ 24556657 (+)
LOC120568139 NA non-coding upstream 1434521 24337693 ~ 24339256 (+)
LOC120568900 NA non-coding downstream 78375 25872329 ~ 25873402 (+)
LOC120568898 NA non-coding downstream 86550 25880504 ~ 25888841 (+)
G117845 LOC103356872,LOC107087289 non-coding downstream 110959 25904913 ~ 25905131 (+)
G117846 NA non-coding downstream 112161 25906115 ~ 25906316 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding downstream 122546 25916500 ~ 25916722 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 309 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 729720 24987499 ~ 25044057 (+)
G117664 NA other upstream 819530 24950568 ~ 24954247 (+)
selenot1a selenot,LOC103365166 other upstream 903690 24862996 ~ 24870087 (+)
LOC120569045 cacybp other upstream 1098023 24667879 ~ 24675754 (+)
G117829 NA other downstream 35810 25829764 ~ 25830695 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other downstream 254835 26048789 ~ 26051099 (+)
LOC120568800 NA other downstream 420478 26214432 ~ 26217041 (+)
ece2a ece2,LOC103356888 other downstream 424044 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 601472 26395426 ~ 26402078 (+)

Expression

LOC120568895 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
End of interactive chart.

LOC120568895 Expression in each Bioproject

Bar chart with 7 bars.
LOC120568895 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 800.
End of interactive chart.

Co-expression Network