G117829


Basic Information

Item Value
gene id G117829
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 25829764 ~ 25830695 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158824
TTTGGAGAAATAGAGTCTGTAGATAATgttgtgctgttatctggtggggagactggtatGGTTGTGCTGTTATCTGGTGGGGAGACTGGTATGGTTGTGCTGTTATCTGGTGGGGAGACTGGTATGgttgtgctgttatctgctggGGAGACTGGTATGgttgtgctGTTATCTGGTGGGGAGACTGGTATGGTTGTGCCGTTATCTGGTGGggagactggtaaagttgtgcCGTTATCT
>TU158825
gttgtgctgttatctgctggtgagactggtaaagttgtgctgttatctggtggggagactggtaaagttgtgctgttatctgctggtgagactggtaaagttgtgctgttatctgctggtgagactggtacagttgtgctgttatctgctggGGAGACTGGTATGGTTGTGCTATTATCTGCTGGggagactggtaaagttgtgctgttatctggtggggagactggtaaagttgtgctgttatctgctggtgagactggtatggttgtgctgttatctgctggtgagactggtatGGTTGTGCTGTTATCTGGTGGGGAGACTGGTATGGTTGTGCTGTTATCTGGTGGGGAGACTGGTATGgttgtgctgttatctgctggGGAGACTGGTATGgttgtgctGTTATCTGGTGGGGAGACTGGTATGGTTGTGCCGTTATCTGGTGGggagactggtaaagttgtgcCGTTATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158824 False 240 lncRNA 0.49 4 25829764 25830695
TU158825 True 477 TUCP 0.49 2 25830055 25830695

Neighbor

gene id symbol gene type direction distance location
LOC120568896 NA coding upstream 18484 25808021 ~ 25811280 (+)
LOC120568352 ephb1,LOC103359190,LOC105935923,LOC107384019,LOC106599529,LOC106907045 coding upstream 272132 25376185 ~ 25557632 (+)
LOC120568394 LOC103359187 coding upstream 475981 25281304 ~ 25353783 (+)
gpc5c LOC103359185,LOC104919215 coding upstream 567423 25140737 ~ 25262341 (+)
LOC120568127 NA coding upstream 715962 25085974 ~ 25113802 (+)
acsl3b LOC103356873,LOC102195906 coding downstream 100846 25931541 ~ 25944450 (+)
scg2b LOC104966178,LOC102792743 coding downstream 129111 25959806 ~ 25963171 (+)
LOC120568964 dhrs12,LOC103356877,LOC100697743 coding downstream 137915 25968610 ~ 25972306 (+)
LOC120567653 LOC104919205,LOC102308383,LOC100712433,LOC101483053,LOC102214738,LOC102794313,LOC104966180,LOC103396000,LOC106528146,LOC108245529,LOC102232174,LOC103479388 coding downstream 169527 26000222 ~ 26046169 (+)
kcnab1b LOC103356881,LOC103395998,LOC101482076,LOC102213317,LOC102305142,LOC104919203,LOC101062207 coding downstream 242676 26073371 ~ 26115398 (+)
LOC120568901 NA non-coding upstream 36573 25782175 ~ 25793191 (+)
LOC120568228 NA non-coding upstream 698835 25125831 ~ 25130929 (+)
G117704 NA non-coding upstream 711262 25118231 ~ 25118502 (+)
G117632 NA non-coding upstream 991535 24837956 ~ 24838229 (+)
G117547 NA non-coding upstream 1273107 24556419 ~ 24556657 (+)
LOC120568900 NA non-coding downstream 41634 25872329 ~ 25873402 (+)
LOC120568898 NA non-coding downstream 49809 25880504 ~ 25888841 (+)
G117845 LOC103356872,LOC107087289 non-coding downstream 74218 25904913 ~ 25905131 (+)
G117846 NA non-coding downstream 75420 25906115 ~ 25906316 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding downstream 85805 25916500 ~ 25916722 (+)
LOC120568895 NA other upstream 35810 25773777 ~ 25793954 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 56296 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 785707 24987499 ~ 25044057 (+)
G117664 NA other upstream 875517 24950568 ~ 24954247 (+)
selenot1a selenot,LOC103365166 other upstream 959677 24862996 ~ 24870087 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other downstream 218094 26048789 ~ 26051099 (+)
LOC120568800 NA other downstream 383737 26214432 ~ 26217041 (+)
ece2a ece2,LOC103356888 other downstream 387303 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 564731 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 585813 26416508 ~ 26418008 (+)

Expression


Co-expression Network