LOC120567655 (LOC103356880,LOC101482764,LOC104966182,LOC107087304)


Basic Information

Item Value
gene id LOC120567655
gene name LOC103356880,LOC101482764,LOC104966182,LOC107087304
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26048789 ~ 26051099 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158861
GGGTCCATCTGTTTTAGGGTTGGTGGGGTTATGCTAAATCCAGGCAGAGCTGGGATTGGTCACTTGTAAGGTCTTTTTTTGGGTGAGACCACGGGGCCTGAAAGCGCTTAAATCCGCTCCTAAACGTATCAGTCACCACTCTAGCCTTGCACAGGTTACTCACACCAGATCTCCACAATTTATTTCCCCAAAAGGTCAAGTGTGATCCAAGAGGCGCAGACCCCCCCACCCACTaagatactgtatttgaagCCGTGGACTGTGGTGGAGTTGTGTTACgactaaatgtttttgtttttatccccccccccctctccggTCTGGTGAAAGTGGATTTATCATGGAACTTGCACTTAGCTGACGGTGTCCCTCCTCAGTGTGCACAAACAAGGACCTTAGTGCATTGCTGTCGCTGCATGGGGAACGCCACAACCCCATGTCAAGTGCCTTCCTAAGAAAACTCCTGTGACTGTGCCAACTGATGAGCCCTACTTCCTCTGCAGTGCGTCTTGATGGCAATCAGAACTTTTTTTAGCAGTTTTCAGTAAACAATCTAGTTTAATTTGGTGTTGAAGTGAGGAGAGCCTCTAACCTATCTTGCTGTCAGGAAGCCGAGCTTGTATCAGACCTGTTTTTTCAGGGTCCGACTCAAGCCGTTTCTCGAGGTACTAGTCCAACAAGAACAACAGTAACTTTAGCCTACTAGGATTGTGGTTCAGTGAATGGCAagccatgtgtgtctgt
>XM_039814613.1
CATCCGATGAGAACATCTGATGGCTCTGGCCGAGGTTTGGTTTCGGGTGACGGCTCCTTTAAGAAAACGGAACTGAGCCTCGGCTTTTGACGCGCTGCTGAGGATGTGGGCAGGAAACGCCATGCAAGAGCGGAGGAGCGATCACGCTTCCCAGCCCCGTTGCACAATACAGTGCGATCAAAATGTGCTTTAATTCGCCACGCTAATGTCCAGGAGCGGCCATTCTCCTCGGATCTGCGCTCCGCGGCCGTCACAGAGCAGGCGAGGAGGATTTGACTCCTATCCGAGCGAGAGGGCAGCCTATCCAGCCTGCTCGCTTTGAAAACATCGGGGCTGGTCAGCGggtgggagagagacagagagagagagacagagagagagagagagcgcaggCAGGCTTCGtcgcggaaaaaaaaaaaaggaggtgtCTGCCATGAGGGAGTACAAAGTGGTTGTTTTGGGCTCGGGTGGAGTCGGGAAATCGGCGCTGACGGTCCAGTTCGTGACGGGCTCCTTCATCGAGAAGTACGACCCCACGATAGAGGATTTCTACCGGAAGGAGATCGAGGTGGACTCGTCCCCGTCGGTGCTGGAGATCCTGGACACGGCGGGGACCGAGCAGTTCGCCTCCATGCGAGACCTGTACATCAAGAACGGCCAGGGCTTTATTTTGGTTTACAGCCTGGTGAACCAGCAGAGCTTCCAGGACATCAAGCCGATGAGAGACCAGATCATCCGGGTGAAGAGATACGAGAGGGTGCCCATGATCCTGGTGGGAAACAAGGTGGACctggagggggagagagaggtgtcTTCCGGGGAAGGCAAGGCGCTGGCCCAGGAGTGGAACTGCCCGTTTATGGAAACTTCAGCCAAAAATAAAGGATCAGTCGACGAACTGTTTGCGGAAATAGTCAGACAGATGAACTATTCAACTGTTCCCAGTGGTGGCGACCAGTGCTGCTCATGTGTCCTGctctaaaaaacaacaacaactaaccTACAGAAAACAGTGCATCCGGGCTGAATTGGAGCTTCTAAGTTGTCCTGCAGGCTTTTTGCGAAGCTATTCTCTCTCCTCACactgttgtcttattgttgcacACAAATCAACGACGACAATAATCCATTGTGTATTATAGCCTGGAAAAGTGTTTACATGACAAAGTACTTGAatgttttgggatttttttttttttttaatatagctTTGTATATGACACTTCTCTGGAAATGTGCCTCAGTGGGAATGTCTTATTGTGAAACCTAAGAGACACCTGTTTTctggttattgttttttttttgtggttttatttGTTGAGTTGTACTGTTACATCTTCTAGGCCGGGTCCATCTGTTTTAGGGTTGGTGGGGTTATGCTAAATCCAGGCAGAGCTGGGATTGGTCACTTGTAAGGTCTTTTTTTGGGTGAGACCACGGGGCCTGAAAGCGCTTAAATCCGCTCCTAAACGTATCAGTCACCACTCTAGCCTTGCACAGGTTACTCACACCAGATCTCCACAATTTATTTCCCCAAAAGGTCAAGTGTGATCCAAGAGGCGCAGACCCCCCCACCCACTaagatactgtatttgaagCCGTGGACTGTGGTGGAGTTGTGTTACgactaaatgtttttgtttttatccccccccccctctccggTCTGGTGAAAGTGGATTTATCATGGAACTTGCACTTAGCTGACGGTGTCCCTCCTCAGTGTGCACAAACAAGGACCTTAGTGCATTGCTGTCGCTGCATGGGGAACGCCACAACCCCATGTCAAGTGCCTTCCTAAGAAAACTCCTGTGACTGTGCCAACTGATGAGCCCTACTTCCTCTGCAGTGCGTCTTGATGGCAATCAGAACTTTTTTTAGCAGTTTTCAGTAAACAATCTAGTTTAATTTGGTGTTGAAGTGAGGAGAGCCTCTAACCTATCTTGCTGTCAGGAAGCCGAGCTTGTATCAGACCTGTTTTTTCAGGGTCCGACTCAAGCCGTTTCTCGAGGTACTAGTCCAACAAGAACAACAGTAACTTTAGCCTACTAGGATTGTGGTTCAGTGAATGGCAagccatgtgtgtctgtattatctagattttttttttcttttctaaaaaaaaaaaaaaaaaaaaaagaaaattttgaCTTACCGTAATTGTAATTCTctctttggacaaactcttctGCCATCCACCTGTCAGTTTGAAAGACTTAATACTTAATACAAAACGCATTTTACGTAACGCTGTGTGCTGTGCTTGTCTCTGCTGATAACATAAAGTGTCTACATTTTTGGGGTACTTTGA

Function

NR:

description
PREDICTED: ras-related protein Rap-2b-like

GO: NA

KEGG:

id description
K07838 RAP2B; Ras-related protein Rap-2B

RNA

RNA id representative length rna type GC content exon number start site end site
TU158861 False 744 lncRNA 0.48 1 26050135 26050878
XM_039814613.1 True 2311 mRNA 0.48 1 26048789 26051099
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120567653 LOC104919205,LOC102308383,LOC100712433,LOC101483053,LOC102214738,LOC102794313,LOC104966180,LOC103396000,LOC106528146,LOC108245529,LOC102232174,LOC103479388 coding upstream 2620 26000222 ~ 26046169 (+)
LOC120568964 dhrs12,LOC103356877,LOC100697743 coding upstream 76483 25968610 ~ 25972306 (+)
scg2b LOC104966178,LOC102792743 coding upstream 85618 25959806 ~ 25963171 (+)
acsl3b LOC103356873,LOC102195906 coding upstream 104339 25931541 ~ 25944450 (+)
LOC120568896 NA coding upstream 237509 25808021 ~ 25811280 (+)
kcnab1b LOC103356881,LOC103395998,LOC101482076,LOC102213317,LOC102305142,LOC104919203,LOC101062207 coding downstream 22272 26073371 ~ 26115398 (+)
pask NA coding downstream 64833 26115932 ~ 26130177 (+)
mterf4 NA coding downstream 80104 26131203 ~ 26134522 (+)
LOC120567725 NA coding downstream 84037 26135136 ~ 26139505 (+)
klhl24a klhl24 coding downstream 88562 26139661 ~ 26163512 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 132067 25916500 ~ 25916722 (+)
G117846 NA non-coding upstream 142473 25906115 ~ 25906316 (+)
G117845 LOC103356872,LOC107087289 non-coding upstream 143658 25904913 ~ 25905131 (+)
LOC120568898 NA non-coding upstream 159948 25880504 ~ 25888841 (+)
LOC120568900 NA non-coding upstream 175387 25872329 ~ 25873402 (+)
G117917 NA non-coding downstream 7155 26058254 ~ 26065839 (+)
G117933 NA non-coding downstream 153512 26204611 ~ 26204830 (+)
G117938 NA non-coding downstream 157257 26208356 ~ 26208871 (+)
G118009 NA non-coding downstream 263166 26314265 ~ 26314630 (+)
G118095 NA non-coding downstream 481067 26532166 ~ 26601409 (+)
G117829 NA other upstream 218094 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 254835 25773777 ~ 25793954 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 275321 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 1004732 24987499 ~ 25044057 (+)
G117664 NA other upstream 1094542 24950568 ~ 24954247 (+)
LOC120568800 NA other downstream 163333 26214432 ~ 26217041 (+)
ece2a ece2,LOC103356888 other downstream 166899 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 344327 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 365409 26416508 ~ 26418008 (+)
wdr47a wdr47,LOC102290984 other downstream 370355 26421454 ~ 26496809 (+)

Expression

LOC120567655(LOC103356880,LOC101482764,LOC104966182,LOC107087304) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
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LOC120567655(LOC103356880,LOC101482764,LOC104966182,LOC107087304) Expression in each Bioproject

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LOC120567655(LOC103356880,LOC101482764,LOC104966182,LOC107087304) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network