G117938


Basic Information

Item Value
gene id G117938
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26208356 ~ 26208871 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158986
GggccagacttgattagaacgaaggaaatgcaaactctgtaaacttgaatagaatcggcactaccatgataaacaaCCTTTGTCTGGGAActggagtaaacctgaaatcagaggtgtgtcttTAAGCTGGGACAGTTTCCATTCAAGGAAACACCCACGATTCCAAAGGAATATAATTCCGAACCTGGGAATGATTCAGgactgattgatgtaattcctgaagaggaggcatgtcatttcagtccactgctggcagtgtttcatgttttatgtttgattgtttttgtcatgtcgttttcatcgtgttgttcattaaaccttttgcttaatctttcaattggACCccgcctctccttcctcctcagaaatcgaacgaacacgtcttttagGATTTCTTAACAGTAGCCAACATTAAATTACACCGGTTACGccgcaccgtaaagaaaagacctttacgacagcaggtgtggtaaaaacactaccacttttgtccaaagcagccactagaatcaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158986 True 516 lncRNA 0.42 1 26208356 26208871

Neighbor

gene id symbol gene type direction distance location
yeats2 yeats2 coding upstream 13476 26166546 ~ 26194880 (+)
klhl24a klhl24 coding upstream 44844 26139661 ~ 26163512 (+)
LOC120567725 NA coding upstream 68851 26135136 ~ 26139505 (+)
mterf4 NA coding upstream 73834 26131203 ~ 26134522 (+)
pask NA coding upstream 78179 26115932 ~ 26130177 (+)
alg3 alg3 coding downstream 121353 26330224 ~ 26334321 (+)
prss56 prss56,LOC102789963 coding downstream 152264 26361135 ~ 26368256 (+)
chrng chrng coding downstream 160916 26369787 ~ 26387522 (+)
LOC120568303 LOC104957792,LOC103356898 coding downstream 178809 26387680 ~ 26393785 (+)
ticam1 NA coding downstream 226879 26435750 ~ 26439450 (+)
G117933 NA non-coding upstream 3526 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 142517 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 291634 25916500 ~ 25916722 (+)
G117846 NA non-coding upstream 302040 25906115 ~ 25906316 (+)
G117845 LOC103356872,LOC107087289 non-coding upstream 303225 25904913 ~ 25905131 (+)
G118009 NA non-coding downstream 105394 26314265 ~ 26314630 (+)
G118095 NA non-coding downstream 323295 26532166 ~ 26601409 (+)
G118098 NA non-coding downstream 339785 26548656 ~ 26605084 (+)
G118115 NA non-coding downstream 393785 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 453411 26662282 ~ 26664844 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other upstream 157257 26048789 ~ 26051099 (+)
G117829 NA other upstream 377661 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 414402 25773777 ~ 25793954 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 434888 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 1164299 24987499 ~ 25044057 (+)
LOC120568800 NA other downstream 5561 26214432 ~ 26217041 (+)
ece2a ece2,LOC103356888 other downstream 9127 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 186555 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 207637 26416508 ~ 26418008 (+)
wdr47a wdr47,LOC102290984 other downstream 212583 26421454 ~ 26496809 (+)

Expression


Co-expression Network