LOC120568800


Basic Information

Item Value
gene id LOC120568800
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26214432 ~ 26217041 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU158989
ATTTGCTACTAATACTTttttccttacattttaaattaggaCTTTTGTAATTGAGTATTTTAGGCTAaggtatttctacttttacttaagttgaaggtgctgtaggtaagccttataaaactaactttctgtcatatttgctgaaactgaccctatgttcgagaagaactacatgaagcgggtgattttttttttaaagataattttttggggctattccctttattcgatagtgacagtggatagacaggaaagggggaaagaaagagaagggatgacacgcagcaaagggccacaggtcagattcgaacccagaccgctgcaaaggactcagcctacatggggcgcacgctctactgaGTGGGCTAGAGTCCACcccatgaagcaggtaattaaaaagaaaatctggctcctctggcaccacctacagcctgtagtgcgatttgcaaaaatccaccgctccctgttcagatgcaccaatcagggccagggggggtgtctaagggcgctgacacaccaggccgattatcggccgtgggacagtctggcgaggtcagtgactcaaatctgttcggtgtgtcccgtgccatcgtcagtctgaggggctgtcggcgttcattttggccgacctgacatgttcggtcggcggcagggcagtcgggactcacccggaaatggtgagcggaatgaggtgactagagtctctcaaaatccgacgaaaatcttttaaactgacctttgttgagctgaaatgaagacagattcagcaactgcacggcctatttctcgcttaaaatgttttcagaaacatgtttcagtgaactattttagtacaacatgagatcgtattctgaatggccgccatgacagtctggctttgaatttccggagaaaacaaacccatgtgatgcgttcgtccaatcagctgccggttttcatttcttgggcaacattacagattagcgccgcctgctgttatagagatgtattacgtctcctctcgtctttttggtctgttctgtggcagttttttggacctcggggacgcgactgatcatatcgacggggttttctgtcaacggtcagccgtcggctaaatgtgtctacaccttaactgcgtgtcaatcactgctcatgcacacgcattcattctcccttgtggggggaggggcttaagagaccgttttgggctttagtggaaaggggggagggactgagaagttgtcgatgttcacattttttggctaaatcctggatcttcataatcctacctacggcacctttaacatCTGAGTACTTCAAATTAAAAGTAGAC
>XM_039816507.1
TCCATTTCACATGTGGGAGACCTAAGAGAATATGAAAAACATTCTTGTGCTTTGTTCTACCTGCGGTTGGGGTATCTCAAGACTTTCCATGCCTTCCCACTAGCCTAAccgttatacacacacacacacacaccctgtggAGTTGTTTCTGCCCTCTATAGTCACAACGAGGAATTTACACTAATGTTCCTGTAACTGCAATTTAAAGAGTAACTGCAGTAAATTCAGTATGCTAGTCAATGTCCCTGTAGAACAACAACACGTATTTCATTATGAAATATGCACTTTAAACAGCTGTCCTAACTGTGTATGAGCAGGCAATGGTGAGGGCAGGAGTCCAGGtcacagaaaagaaagaagttCTGGCAATGGAAAATGAGGGAGATGCCCACATTGTCTGGAGAGAGTCCCAGATGGACATCGCTTCATCTGACGTCCTGAGCTGTGAGGAGACGGCCGACGCTGCAGTACCACGGCCTCTGTCGGTCAGGCGGCTGGTGGTGCGTCGTGGCCTGACCGTGCTCTTCATGGTGCTCATCCTCGCAGCGGGGATACTCACCCACCAAATGCTTCTCAAACACAAATGACCGACACTATACTGCTGGCTGTCTcacagctgtgtggtttgggtTGAGTGCTACATCACATAGTAATATGCAGAGGTGGAATGTAACCGAATAGgcctacatttactcaagtgctgtacTTAGTACAATTTTGACATAGCCTACTTGTATTTCACTTgagtttttttcatttcctgctACTTTCTGCTCTTATACATTTGAGAGGCAGATATTTACCTTTGTCTTTACTATATTTATTTGACACTTAGAGTTAGTAGTTACTATACTACTAATCTACCCAGTAGTATACAGAATATATAAAATTGGATCCACATAATACTTTGAAAGGAGCCATTATGTAGAATGagacattttacttttactacttTAATTACAATTTGCTACTAATACTTttttccttacattttaaattaggaCTTTTGTAATTGAGTATTTTAGGCTAaggtatttctacttttacttaagttgaaggtgctgta
>XM_039816508.1
ATTGGCAATGGTGAGGGCAGGAGTCCAGGtcacagaaaagaaagaagttCTGGCAATGGAAAATGAGGGAGATGCCCACATTGTCTGGAGAGAGTCCCAGATGGACATCGCTTCATCTGACGTCCTGAGCTGTGAGGAGACGGCCGACGCTGCAGTACCACGGCCTCTGTCGGTCAGGCGGCTGGTGGTGCGTCGTGGCCTGACCGTGCTCTTCATGGTGCTCATCCTCGCAGCGGGGATACTCACCCACCAAATGCTTCTCAAACACAAATGACCGACACTATACTGCTGGCTGTCTcacagctgtgtggtttgggtTGAGTGCTACATCACATAGTAATATGCAGAGGTGGAATGTAACCGAATAGgcctacatttactcaagtgctgtacTTAGTACAATTTTGACATAGCCTACTTGTATTTCACTTgagtttttttcatttcctgctACTTTCTGCTCTTATACATTTGAGAGGCAGATATTTACCTTTGTCTTTACTATATTTATTTGACACTTAGAGTTAGTAGTTACTATACTACTAATCTACCCAGTAGTATACAGAATATATAAAATTGGATCCACATAATACTTTGAAAGGAGCCATTATGTAGAATGagacattttacttttactacttTAATTACAATTTGCTACTAATACTTttttccttacattttaaattaggaCTTTTGTAATTGAGTATTTTAGGCTAaggtatttctacttttacttaagttgaaggtgctgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158989 True 1315 TUCP 0.47 1 26215727 26217041
XM_039816507.1 False 1066 mRNA 0.41 2 26214649 26215830
XM_039816508.1 False 753 mRNA 0.41 3 26214432 26215830

Neighbor

gene id symbol gene type direction distance location
yeats2 yeats2 coding upstream 19552 26166546 ~ 26194880 (+)
klhl24a klhl24 coding upstream 50920 26139661 ~ 26163512 (+)
LOC120567725 NA coding upstream 74927 26135136 ~ 26139505 (+)
mterf4 NA coding upstream 79910 26131203 ~ 26134522 (+)
pask NA coding upstream 84255 26115932 ~ 26130177 (+)
alg3 alg3 coding downstream 113183 26330224 ~ 26334321 (+)
prss56 prss56,LOC102789963 coding downstream 144094 26361135 ~ 26368256 (+)
chrng chrng coding downstream 152746 26369787 ~ 26387522 (+)
LOC120568303 LOC104957792,LOC103356898 coding downstream 170639 26387680 ~ 26393785 (+)
ticam1 NA coding downstream 218709 26435750 ~ 26439450 (+)
G117938 NA non-coding upstream 5561 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 9602 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 148593 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 297710 25916500 ~ 25916722 (+)
G117846 NA non-coding upstream 308116 25906115 ~ 25906316 (+)
G118009 NA non-coding downstream 97224 26314265 ~ 26314630 (+)
G118095 NA non-coding downstream 315125 26532166 ~ 26601409 (+)
G118098 NA non-coding downstream 331615 26548656 ~ 26605084 (+)
G118115 NA non-coding downstream 385615 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 445241 26662282 ~ 26664844 (+)
LOC120567655 LOC103356880,LOC101482764,LOC104966182,LOC107087304 other upstream 163333 26048789 ~ 26051099 (+)
G117829 NA other upstream 383737 25829764 ~ 25830695 (+)
LOC120568895 NA other upstream 420478 25773777 ~ 25793954 (+)
LOC120568894 LOC102789372,LOC104966552 other upstream 440964 25743327 ~ 25773468 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other upstream 1170375 24987499 ~ 25044057 (+)
ece2a ece2,LOC103356888 other downstream 957 26217998 ~ 26309547 (+)
G118011 eif4e2 other downstream 178385 26395426 ~ 26402078 (+)
ccl20a.3 NA other downstream 199467 26416508 ~ 26418008 (+)
wdr47a wdr47,LOC102290984 other downstream 204413 26421454 ~ 26496809 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other downstream 373741 26590782 ~ 26600072 (+)

Expression


Co-expression Network