G118002


Basic Information

Item Value
gene id G118002
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26308787 ~ 26309326 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159059
GACCAACACAAAGCGCCGCATAATTGTGAAGTGGAAGGAAaatgatacatggttttcaaaaaatttttacaaataaaaaactgaaaagtgtggcgtgcaaaagtattcagccccctttactCTGATACCCCTAAATAAAATCTAGTGCAACCAATTGCCTTCAGAAGTCACCTAATTAGTATACACCTCTGTGTATTCTAATCTCAGTATAAATACAGCTGTTCTGTGAAGGCCTCAGAGGTTTGTTAGAGAACATTAGTGAACAAACAGCATCATGGAGCCCAAGGAACATACCAGACAGGTCAGGGGTAaagttgtggagaagtttaaagcaggGTTAGGTTATAGAAAAAATAACCCAAGCTTTGAACATCTCACGGAGCACTGTTCAATCCATCATCCGAAAATGGAAAGAGTATGGCACAACTGCAAACCTCCCAAGACATGGCCGTGGCCATGGTAactctggaggagctgcagagatCCACAGCTCAGGTGGGAGAATCTGTCCACAGGACAACTATTAGTAGTGCACTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159059 True 540 lncRNA 0.42 1 26308787 26309326

Neighbor

gene id symbol gene type direction distance location
map6d1 NA coding downstream 105227 26195843 ~ 26203560 (-)
LOC120567824 LOC106676181,LOC105890570,LOC105912786,LOC106632393 coding downstream 250215 26052099 ~ 26058572 (-)
LOC120568966 LOC104919207,LOC103356876,LOC108245539 coding downstream 319840 25972731 ~ 25988947 (-)
LOC120568965 LOC104919208,LOC101171526,LOC104966176,LOC103396005,LOC101079252 coding downstream 340367 25963373 ~ 25968420 (-)
pax3a LOC103356872 coding downstream 391014 25895638 ~ 25917773 (-)
mul1a mul1 coding upstream 16162 26325488 ~ 26330262 (-)
vwa5b2 vwa5b2,LOC104957800 coding upstream 25114 26334440 ~ 26348151 (-)
eif4e2 eif4e2,LOC102778094 coding upstream 83563 26392889 ~ 26400884 (-)
capn10 capn10 coding upstream 91656 26400982 ~ 26410408 (-)
ccl20a.4 NA coding upstream 101841 26411167 ~ 26412103 (-)
G117995 NA non-coding downstream 97039 26211508 ~ 26211748 (-)
G117994 NA non-coding downstream 98119 26210349 ~ 26210668 (-)
G117993 NA non-coding downstream 113903 26193007 ~ 26194884 (-)
G117957 NA non-coding downstream 206698 26097593 ~ 26102089 (-)
LOC120567720 NA non-coding downstream 222443 26064589 ~ 26086344 (-)
LOC120569074 NA non-coding upstream 112124 26421450 ~ 26426798 (-)
G118075 NA non-coding upstream 164561 26473887 ~ 26474956 (-)
G118076 NA non-coding upstream 168137 26477463 ~ 26479678 (-)
G118165 NA non-coding upstream 222841 26532167 ~ 26601385 (-)
G118186 NA non-coding upstream 422551 26731877 ~ 26732084 (-)
G117732 NA other downstream 1385469 24922203 ~ 24923318 (-)
G117560 NA other downstream 1772291 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2452166 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 2817175 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 2877795 23430366 ~ 23430992 (-)
camk2n1a camk2n2 other upstream 6444 26315770 ~ 26319595 (-)
G118175 NA other upstream 352295 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 510512 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 1334001 27643327 ~ 27675360 (-)
G118524 NA other upstream 1404141 27713467 ~ 27718759 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G218215 NA non-coding CI01000051 null 2231062 ~ 2231269 (+)