Gene
RNA
| Item | Value |
|---|---|
| gene id | ccl20a.3 |
| gene name | NA |
| gene type | misc |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 26416508 ~ 26418008 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| C-C motif chemokine 5-like |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU159113 | True | 643 | TUCP | 0.43 | 4 | 26416508 | 26418008 |
| XM_039816365.1 | False | 590 | mRNA | 0.44 | 4 | 26416544 | 26417991 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120568303 | LOC104957792,LOC103356898 | coding | upstream | 22723 | 26387680 ~ 26393785 (+) |
| chrng | chrng | coding | upstream | 28986 | 26369787 ~ 26387522 (+) |
| prss56 | prss56,LOC102789963 | coding | upstream | 48252 | 26361135 ~ 26368256 (+) |
| alg3 | alg3 | coding | upstream | 82187 | 26330224 ~ 26334321 (+) |
| yeats2 | yeats2 | coding | upstream | 221628 | 26166546 ~ 26194880 (+) |
| ticam1 | NA | coding | downstream | 17742 | 26435750 ~ 26439450 (+) |
| camsap2b | LOC102288635,LOC100701512,LOC103357628 | coding | downstream | 22727 | 26440735 ~ 26479429 (+) |
| LOC120569037 | NA | coding | downstream | 90920 | 26508928 ~ 26521103 (+) |
| fndc7a | NA | coding | downstream | 106937 | 26524945 ~ 26535699 (+) |
| LOC120567673 | NA | coding | downstream | 116488 | 26534496 ~ 26553081 (+) |
| G118009 | NA | non-coding | upstream | 101878 | 26314265 ~ 26314630 (+) |
| G117938 | NA | non-coding | upstream | 207637 | 26208356 ~ 26208871 (+) |
| G117933 | NA | non-coding | upstream | 211678 | 26204611 ~ 26204830 (+) |
| G117917 | NA | non-coding | upstream | 350669 | 26058254 ~ 26065839 (+) |
| G117847 | pax7,LOC106964226,LOC102296763 | non-coding | upstream | 499786 | 25916500 ~ 25916722 (+) |
| G118095 | NA | non-coding | downstream | 114158 | 26532166 ~ 26601409 (+) |
| G118098 | NA | non-coding | downstream | 130648 | 26548656 ~ 26605084 (+) |
| G118115 | NA | non-coding | downstream | 184648 | 26602656 ~ 26674451 (+) |
| G118135 | NA | non-coding | downstream | 244274 | 26662282 ~ 26664844 (+) |
| LOC120569009 | NA | non-coding | downstream | 325733 | 26743741 ~ 26763260 (+) |
| G118011 | eif4e2 | other | upstream | 14430 | 26395426 ~ 26402078 (+) |
| ece2a | ece2,LOC103356888 | other | upstream | 106961 | 26217998 ~ 26309547 (+) |
| LOC120568800 | NA | other | upstream | 199467 | 26214432 ~ 26217041 (+) |
| LOC120567655 | LOC103356880,LOC101482764,LOC104966182,LOC107087304 | other | upstream | 365409 | 26048789 ~ 26051099 (+) |
| G117829 | NA | other | upstream | 585813 | 25829764 ~ 25830695 (+) |
| wdr47a | wdr47,LOC102290984 | other | downstream | 3446 | 26421454 ~ 26496809 (+) |
| prkab2 | prkab2,LOC101470867,LOC107384083,LOC102226598 | other | downstream | 172774 | 26590782 ~ 26600072 (+) |
| G118149 | NA | other | downstream | 347484 | 26765492 ~ 26769911 (+) |
| LOC120567599 | LOC101062208 | other | downstream | 421170 | 26839178 ~ 26857394 (+) |
| LOC120568791 | LOC103357601 | other | downstream | 460547 | 26878555 ~ 26938882 (+) |
