LOC120569074


Basic Information

Item Value
gene id LOC120569074
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26421450 ~ 26426798 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159131
GTCAGATTGCCTTTTAACTGTTTTGTGTTTACATCTGATTTTGTCTTCTATCTGTAGGTGTCCCGTTAGTGCCTCCTGATGCTTGTGACTCTGTGAAGATGAAGATCGTTTTTCTATGAGATGCTGTTATGGCCAGTTTTGAAGTGAAGATGAAAGACTTTCAAGTTCCTCTGATTAATGAGGTGGTGGTAAGGCAATAAAGCAGAACCTCtgaaaaaatgaatggaaaaaaaacaaccgaaCCATGTTTGCCCTGTGGATAGTGGACTCATTCTGCCACTGTCCTGTGTCATTATGTCCCTTTGCTGTGTGACCTGTCCTCTGGGGTTTGAGTGAGTGTCCCTGTCCCCTGCTCTGTCTGTCCTCCTTCCTCTACGCCCTGCCTCGTCTTGTCAGCTCAGCTCACGGTCACAGCCCTGCTTGCCTCGGTGAACATTCAACGCTGTCGGTGAGTTTTGGTATGGATCACATAAAAACCATCGACCGTTGACTGTGCCCCGAGGCTTGCTCCGACGACGTCGGGAatgagcaaaaaataaataaaatgaaatgagcaAAAGGGCAAGTGGGCGCATGCAAAAATCGAGAGACGAAGACGCACACGTACAAAAGTGACACTCTGTTTCCACTGTACCCAAAGACCAAAGGTCACAATCAACATTCATTGCTGTCGCTGGGTTGGACTGTGTAGAAAAGCTCACTGAACAATGAGTGCAACTGTGGCCCAGATCTGCCTGACTCGCGTCTCAGCCAATCGGCCGACCGGATGCGAAAcactttgttttctttatttatattaCTTCTTGTTTTTCACTTCTATTTtctcccctcttcctccctccctggcGCTGAATAGTCTtcaggggaagagagagagagatagagacataAATAGACTTCTGGCGGCTTGCTtgtcctcatcctcctctcctctaATTGGTGGTTATGTGTGCAGCAAGGGGGAAGGAAGCGGAGTGAATGTGTAATCATTTGGAGTCTCTTCTCCTTTAGATGtttcatccctctctcttttttgtttgtctaaTTATATACTGAGCTCTGTTAACTCTGTGTTAACTGTGCTGGCAAGAATGAGCGAGTGACAAAGAGAGGGAGGACAATGGGGAAACACAAAAAGGTGGAGAGATTAGAGCACCAGTAAACGTATTATCTAGTTTTCAGTATATGTATTCTAATATTATTCCTAATGTTGCTGCAAATGTGACCGGATataagcatttatttttttaaatgcagaaagGAGATTGTTTTCACCTCTTTGGCTGAggtctcattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttcctTCTATCCCCAAGCAGCTTGCTCCCTCATGGGAAAACACAAGTCTCTAACCTTGTCTTCCTGCAGACAGTGTGGGACCGGCCACGCTGCTGCCATTTCTCTTTGTACCCATCTGTAACAACTCTCTGACACTGCGTCCTGTATCTGTAATTCATGGAATGTAAACACACAGTTGAGATATATGTAGGAATGCGTTTGGGAAAGTGTGATAATTcatgaattaattaaataaagttgaatcagAATCCATGCAA
>TU159132
catacatacatacatacatacacacacacacacacacacacacacacaaaagacatatTCAGCTGTAGAGAGGGGGTCTCTCAGAGGGCGCAATGTTGAACTGGGGGGGATTAAGACACTGGGGTTGCCATGGCAAAGCCCCCACTTTTCTCCTCTCCCTCGACCCTCCGcctatttttctgtgtgtgtgtgtgtgtgtcacactgtGATAAAGTAGGAAAGATGTAATATGGCTTATGAATTAAGTCTCTTATCTGAGCTGCTTCACCCTGAGAGAAGAGAGACTTCCAGTTCACATGCTGCTGTTCAGACACCAGGAGAAAAGCAAACGGAAAGGAAAGAGGTCTAAAAACTAGTTTATAGTGTTTAACGTTATTTACCAAGTGGCTGTACATTTGATACTACTTAATAGGACTTTATTTGACTACATATGTCCTTTTCTGTGATCATCCAAATTAATTTGTACATTTTCTCATATTCATGAAGGAAAGCACGCTGTGAAAGAATGCAGGGGCAATAATTCAAAGACCCAGACAAAAACCAAACTGTCTATTTTATGACCTTCTGAATTATAGCTGCGGTAACATGATGCATTACTCATTCATTGTAGCCAGTGTGTGATCACGCTAGGCTGACGTCTGCCTCCCTCAGCAGAGTAATGGATGCAGGTCTAGCCTGCTCAATGACATCAGCAAAGCCTAAGCCGATGAAACAGAGCAATGAATGACCATAGATCAGCGTTTACCATCCTGACGTCAGCCCCCGGTCTGCGCAGGAGCGCAGGGACACTGTCACTAGTTGTTTCCCAGCTATGCCCTGCGTCTGACAATGGGAGCTCTCAGCCGGTGGTGGGGCGATGGCTGGGCTCTGAAAAGCTTTGCTGCACAGTAGGACATCGCAGCATTGTTCTCCTGACTAGATGTCCATAACAACCGTGTCAGGCTTGGAGATATTTCTCTTATGTTCTTCTGAGCAATGTCGAaccacagtttaaaaaaaaatatttatatatattatacaaaagtgcatttattttgttttatttaaaacatttatatatttgtttaaagggtcagttcactcaaattattataattattctCACTTAATCTTAGCGTCATCTATATATGCAAAtagttttgttttgtccatttgACTTCCTTCATCTCAAAACAGGGGAGGCTATTGGAATTTCGTCTGTGGTATGTTGTCATTGCATTgacaaattactttttttaagtacctataaaaacagttttgttgATTATTTAGAGCAGAGATATTCAACAGGGTCCATGaccccctagggggtcctcagagttagtgcagggggcagccaaattatgttaaaaaaaatcatttataTAAAGTTTATtactaaataaatatacattaatatttatctaacattttaatagcaaagctaaattggcctatttgtgaaaaaaacaaaacattttatttacacattGAAGGTAAGCTTAGTATAGGAAAGGTAGCAATGGTAGCCATTCAGTTAAGTTTCAGGATtcactgccattcattttcatccaTCCGGCCCAGTTTATATGTGGGACTCTCTTTCAGCCAAGGGACCCTGATTTAGAGTAGTACTTTGTTCctggaaaaaaagacaagttgctgttaaatatttgtaatgtaatttatcAATTCTGTTCTGTTCACTTCTAGCAGAAATCTCAGAGAACGATATATGAAAACCTGTGCTATGGACACCATAATTAGCTGCATGCCTACATACTACAAAAGGAAATGAACAAAGCGAAAATCGTGTGCAACGTCAGTGCTAACGGCTTCCCCATCATCTGTGTTTCAGATGCTGTTATGGCCAGTTTTGAAGTGAAGATGAAAGACTTTCAAGTTCCTCTGATTAATGAGGTGGTGGTAAGGCAATAAAGCAGAACCTCtgaaaaaatgaatggaaaaaaaacaaccgaaCCATGTTTGCCCTGTGGATAGTGGACTCATTCTGCCACTGTCCTGTGTCATTATGTCCCTTTGCTGTGTGACCTGTCCTCTGGGGTTTGAGTGAGTGTCCCTGTCCCCTGCTCTGTCTGTCCTCCTTCCTCTACGCCCTGCCTCGTCTTGTCAGCTCAGCTCACGGTCACAGCCCTGCTTGCCTCGGTGAACATTCAACGCTGTCGGTGAGTTTTGGTATGGATCACATAAAAACCATCGACCGTTGACTGTGCCCCGAGGCTTGCTCCGACGACGTCGGGAatgagcaaaaaataaataaaatgaaatgagcaAAAGGGCAAGTGGGCGCATGCAAAAATCGAGAGACGAAGACGCACACGTACAAAAGTGACACTCTGTTTCCACTGTACCCAAAGACCAAAGGTCACAATCAACATTCATTGCTGTCGCTGGGTTGGACTGTGTAGAAAAGCTCACTGAACAATGAGTGCAACTGTGGCCCAGATCTGCCTGACTCGCGTCTCAGCCAATCGGCCGACCGGATGCGAAAcactttgttttctttatttatattaCTTCTTGTTTTTCACTTCTATTTtctcccctcttcctccctccctggcGCTGAATAGTCTtcaggggaagagagagagagatagagacataAATAGACTTCTGGCGGCTTGCTtgtcctcatcctcctctcctctaATTGGTGGTTATGTGTGCAGCAAGGGGGAAGGAAGCGGAGTGAATGTGTAATCATTTGGAGTCTCTTCTCCTTTAGATGtttcatccctctctcttttttgtttgtctaaTTATATACTGAGCTCTGTTAACTCTGTGTTAACTGTGCTGGCAAGAATGAGCGAGTGACAAAGAGAGGGAGGACAATGGGGAAACACAAAAAGGTGGAGAGATTAGAGCACCAGTAAACGTATTATCTAGTTTTCAGTATATGTATTCTAATATTATTCCTAATGTTGCTGCAAATGTGACCGGATataagcatttatttttttaaatgcagaaagGAGATTGTTTTCACCTCTTTGGCTGAggtctcattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttcctTCTATCCCCAAGCAGCTTGCTCCCTCATGGGAAAACACAAGTCTCTAACCTTGTCTTCCTGCAGACAGTGTGGGACCGGCCACGCTGCTGCCATTTCTCTTTGTACCCATCTGTAACAACTCTCTGACACTGCGTCCTGTATCTGTAATTCATGGAATGTAAACACACAGTTGAGATATATGTAGGAATGCGTTTGGGAAAGTGTGATAATTcatgaattaattaaataaagttgaatcagAATCCATGCAA
>XR_005640834.1
atatccaaaatctaagacgatatttactctcatatcacgatatcgatataatatcgatatattgtccAGCTCTCTGTACAACTTAGTGCTACACTGGAGAAGGACATAAATTTGCACAGACCTTCGAATTGGTCATGTTTGCCGGACAATATGAAGTTCTTAAGAATAATGCCTGCAGCTTACGTCACTTACATCAAGTATCactttatttgtcatttcaCTGAGTACTTGCATACACAGAAGAAACAAAAAGTTGTTTCTCATCAGTCACAGTGCAATAAAAACGGAAATAAATACttataagttaaaaaaaaatatcatgtCTAAAATAGAGCTAAACACAAACATTCAGACAGAACTGAATATAATACCCCAGCCAGATGTTTGGCAAGCCCAGGTCTCTATATGCTTGAAAAAGAACCACCACAAAGCAGCCAAACTGTAATTATCCAAAGTTTGAATAGATTTAAATGGCCACTTTATATAATAAACTAACCAGGGTCAAATATTAGGCCGAGGGCACTGTAGCTCCTCAAAGCGATGTTATTCCTCCCTTATGAAAAATCCGGggatcatttttgttttcttctgcaCACCACAGCACCCTTCAAATAAAGTCTAAAGGCTGCCATTAAAGTGGAGCATATGCATGTGTAGGCATGGAGTGGCGTGTGAGGCCCTTACAGGCAGACTGCAGGTCTGTTAGTCATTACGGGtgaatgtactgtacagtatacacTGGAGTGGACATGCAGCTACATTAAAGTCTCGCCCACGGCCACGTCAGACCACCCCAGAGACACACCACTGGCACTTCCTCCACCCGCTTCCACCGCTCAGCCTTGGGGGGACGCGCGCTTTGGGATTTCCGGAGGACGCACTGGACAATAATTGTCCGTTGATTAGTAAACTTTCTAGTGAAAAAGATGGTCAGATTGCCTTTTAACTGTTTTGTGTTTACATCTGATTTTGTCTTCTATCTGTAGGTGTCCCGTTAGTGCCTCCTGATGCTTGTGACTCTGTGAAGATGAAGATCGTTTTTCTATGAGATGCTGTTATGGCCAGTTTTGAAGTGAAGATGAAAGACTTTCAAGTTCCTCTGATTAATGAGGTGGTGGTAAGGCAATAAAGCAGAACCTCtgaaaaaatgaatggaaaaaaaacaaccgaaCCATGTTTGCCCTGTGGATAGTGGACTCATTCTGCCACTGTCCTGTGTCATTATGTCCCTTTGCTGTGTGACCTGTCCTCTGGGGTTTGAGTGAGTGTCCCTGTCCCCTGCTCTGTCTGTCCTCCTTCCTCTACGCCCTGCCTCGTCTTGTCAGCTCAGCTCACGGTCACAGCCCTGCTTGCCTCGGTGAACATTCAACGCTGTCGGTGAGTTTTGGTATGGATCACATAAAAACCATCGACCGTTGACTGTGCCCCGAGGCTTGCTCCGACGACGTCGGGAatgagcaaaaaataaataaaatgaaatgagcaAAAGGGCAAGTGGGCGCATGCAAAAATCGAGAGACGAAGACGCACACGTACAAAAGTGACACTCTGTTTCCACTGTACCCAAAGACCAAAGGTCACAATCAACATTCATTGCTGTCGCTGGGTTGGACTGTGTAGAAAAGCTCACTGAACAATGAGTGCAACTGTGGCCCAGATCTGCCTGACTCGCGTCTCAGCCAATCGGCCGACCGGATGCGAAAcactttgttttctttatttatattaCTTCTTGTTTTTCACTTCTATTTtctcccctcttcctccctccctggcGCTGAATAGTCTtcaggggaagagagagagagatagagacataAATAGACTTCTGGCGGCTTGCTtgtcctcatcctcctctcctctaATTGGTGGTTATGTGTGCAGCAAGGGGGAAGGAAGCGGAGTGAATGTGTAATCATTTGGAGTCTCTTCTCCTTTAGATGtttcatccctctctcttttttgtttgtctaaTTATATACTGAGCTCTGTTAACTCTGTGTTAACTGTGCTGGCAAGAATGAGCGAGTGACAAAGAGAGGGAGGACAATGGGGAAACACAAAAAGGTGGAGAGATTAGAGCACCAGTAAACGTATTATCTAGTTTTCAGTATATGTATTCTAATATTATTCCTAATGTTGCTGCAAATGTGACCGGATataagcatttatttttttaaatgcagaaagGAGATTGTTTTCACCTCTTTGGCTGAggtctcattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttcctTCTATCCCCAAGCAGCTTGCTCCCTCATGGGAAAACACAAGTCTCTAACCTTGTCTTCCTGCAGACAGTGTGGGACCGGCCACGCTGCTGCCATTTCTCTTTGTACCCATCTGTAACAACTCTCTGACACTGCGTCCTGTATCTGTAATTCATGGAATGTAAACACACAGTTGAGATATATGTAGGAATGCGTTTGGGAAAGTGTGATAATTcatgaattaattaaataaagttgaatcagAATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159131 False 1741 lncRNA 0.45 2 26421450 26425869
TU159132 True 3458 lncRNA 0.42 2 26421450 26424927
XR_005640834.1 False 2665 lncRNA 0.44 2 26421455 26426798

Neighbor

gene id symbol gene type direction distance location
ccl20a.4 NA coding downstream 9347 26411167 ~ 26412103 (-)
capn10 capn10 coding downstream 11042 26400982 ~ 26410408 (-)
eif4e2 eif4e2,LOC102778094 coding downstream 20566 26392889 ~ 26400884 (-)
vwa5b2 vwa5b2,LOC104957800 coding downstream 73299 26334440 ~ 26348151 (-)
mul1a mul1 coding downstream 91188 26325488 ~ 26330262 (-)
gpsm2 gpsm2 coding upstream 70073 26496871 ~ 26508800 (-)
prpf38b prpf38b coding upstream 139192 26565990 ~ 26571804 (-)
LOC120568700 fam102b,LOC103357623 coding upstream 145599 26572397 ~ 26581219 (-)
LOC120567967 LOC104952378,LOC100703940,LOC102297870,LOC103357619 coding upstream 178063 26604861 ~ 26652958 (-)
LOC120568933 LOC104965402,LOC103357616,LOC102791396 coding upstream 247235 26674033 ~ 26715435 (-)
G118002 NA non-coding downstream 112124 26308787 ~ 26309326 (-)
G117995 NA non-coding downstream 209702 26211508 ~ 26211748 (-)
G117994 NA non-coding downstream 210782 26210349 ~ 26210668 (-)
G117993 NA non-coding downstream 226566 26193007 ~ 26194884 (-)
G117957 NA non-coding downstream 319361 26097593 ~ 26102089 (-)
G118075 NA non-coding upstream 47089 26473887 ~ 26474956 (-)
G118076 NA non-coding upstream 50665 26477463 ~ 26479678 (-)
G118165 NA non-coding upstream 105369 26532167 ~ 26601385 (-)
G118186 NA non-coding upstream 305079 26731877 ~ 26732084 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding upstream 533602 26960400 ~ 26963752 (-)
camk2n1a camk2n2 other downstream 101855 26315770 ~ 26319595 (-)
G117732 NA other downstream 1498132 24922203 ~ 24923318 (-)
G117560 NA other downstream 1884954 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2564829 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 2929838 23468620 ~ 23491612 (-)
G118175 NA other upstream 234823 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 393040 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 1216529 27643327 ~ 27675360 (-)
G118524 NA other upstream 1286669 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 1719473 28146271 ~ 28152770 (-)

Expression


Co-expression Network