prkab2 (prkab2,LOC101470867,LOC107384083,LOC102226598)


Basic Information

Item Value
gene id prkab2
gene name prkab2,LOC101470867,LOC107384083,LOC102226598
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26590782 ~ 26600072 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159178
AGCCACACTGTAGTTGAGGCGACGCAAGACCGCTCTGCAGTTGTTGGAGAGAGAGGTTGGCCGTCCGCTGAAAACAAACTGCATATTAACATCAGCTGGTGTCATAGCGAGGCAGTGAGTAGTGAGGCATTATGGGCAACACAAGTGACAGGGTGTCTGGAGAACGCCATGGAGCCAAAGCCCACCGCTCGGACAGCAGCGGCAGTCACAAAGACCAAGAGCCCAGCGGCAAGATGGTGGACAGCACAGATGACCCCAACATCTTCAACACCCACGGGCCAGAGTCCAAGGCGTTAGAAGAGAAAGAATCAGATGTGATTGAGCAGATGAACACTGGTCCTCAGGCTCGACCCACGGTCATCCGCTGGGCCGGGGGGGGGAAGGAGGTCTACATAGCCGGCTCCTTTAATAACTGGAACACCAAGATACCACTAAATAAGAGGtaaacatgttgttgttgtttttttttggtcagctttagagctgcacgatatgaggcaAATATAGAATGTGTGATAACGTTGCTGAATATTCGCGATTAACGATATAATaaccagatattaaagtgtactcaggtCTGCCACTTTCAGCATTCCTGCTAAAATTCAACAAATTGCtcgttgaatttaaaacaaatgaaagtaaATCATTTCCAACGTTGTTTTGTTAAACCCATTGAACATTGAACTGAACACAAAAGGCGACACTTAAAAAGGAACgacattacattataaagtgCATTTTTCTATTGCTATTTTCTTTTAGCTAACTCGTATCAAATCTCCGAGcgtctttcacgatacatggcagCATTTTGCGAGGGATCCCATGCAAATGATCTCCTCTCACCCATCTGAGCTCCAACCATATGTGACAGCTGTAGAGTTTTAACTGACATGAGCGACCAGCATTGCACTTAcactctttcttttcctttctgcaAAGCCATAATGACTTTGTAGCGATCTTGGACCTGCCAGAAGGAGAGCACCAGTACAAGTTTTTTGTAGATGGACAGTGGGTCCACGATCCCTCAGAGGTACAACTGTGTCATTTTGATTGTATTATCATCGTCATGTTATTGAATGTTTCTCCTTAACCCCAACCAGTTCAGTTCTAGACTCTCTGAGATAGGAACTTGAGGAAATTAAGACATCTTTGAAGTAAACTCTTGATAAATTGAGATTTAAATGATCAACCATTCCTAACCCTGAAGTGCTACATGATATTCAGTCAGTGTTGCTAATGTCATGGAATTTGGTCAGAAGAACCACAGAAGAACCATTGCTGTATGCACAGCATCACCATCAAAGCCTCTTGTAAATCCCAGGGAACTGTGTGCAGAGTGTTATAAACAATAATTGTAAAAAATGATTCATCTTTACCTTCTTGAAACATTTCTCTGTTGCAGGCGGTTGTAACCAGTCAGCTCGGCACCATCAACAACCTGATCCAGGTGAAGAAGTCGGACTTTGAGGTGTTTGACGCCCTGCATGTAGACTCTCTGGAGTGCTCCGACACATCAGaccTGTCCAGCTCCCCCCCAGGTCCGTATGGGCAGGAGCAGTACAGCTTCAGACCTGAGGAGCATTTCAAAGCCCCACCCATCCTCCCTCCTCACCTCCTCCAAGTCATCCTCAACAAGGACACCAACATATCCtgtgACCCCGCCCTGCTGCCTGAACCCAACCACGTCATGCTAAACCACCTTTACGCCCTCTCGATTAAGGACGGAGTAATGGTGCTGAGCGCGACTCACCGATACAAGAAGAAATACGTCACCTCTCTGCTTTACAAGCCCATCTAAGCCGCAACTTGGGTGCTTCACGCTGCGTTTAGAGAACAGCATGTTTGTATTCTGctgggtttttttctttttttctttctcagtggCATCAGATTTAGCCAAAACGTGCACTGAAACTAGACAACAGGCCAGTGGCTGTGACTGCGGCTTGGTTTTGGAAAAAGGTTGCACTTCTCTCTACATAGGGCTCTGAACTAAaagaaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtcggAGAGAGATGGAAACCATACTGTGGCTTTTACCTGTGACATCTACAGACCGATAAGAGAGAGACTGACTGAATCACTGTGTGTATTTGAGTGTTTGCTGCCCCTTGTGAATATATGCTTGTCTGCGTTCAAAACGAGATTTTATTTAATAGCGTGGTGTAAAGGAAGAGGGGTGATCTGTGAAAGATCCGTTTCTTTCCATGGGGATTTTAAGGATGCTCTCCTAAAGTGAgggctttttgagtgttattgaTGCGGATCAGCAGTTAGAGTTGAAAGTATTGTGTTAATTAAGTCAGAATAACAGAACGGCCCAGAGCCGAGGTCTAGAATAGATGCTACAGAGAGCAGCAGGCTTGGCTTTGGTTGAACATAACGTGCAATAACCTACATCTTATTTTGTCGGCACATATTAGATATATTATTAAATTTCTCCCAGTTCAGCCGTCATTCAGTGGCATCTACAACGTGAACTAAACTACCAACTAAGTCCAAGATTCCCGTTGTGTTAATGTAACGGTCACTAAACATAGATGGAGTAGAAGGACCCACTTTCCAGATGGCGAATGGAGGTCAAAGGTTGATGTTTAGTTCTGCTGTTGCCTTTATCTTGACATAATTTAGCACTTTACCATCCTGTGAGCAGGAGCGATATaagcttttttttaagtatgcaGCGGACAACTCTTACTGTATTGTAGCTTCTCTGCATTATAGAACCCAATTtgtgcttttttccccctttttgtcAAAtagtaatgtactgtatgtatctgTTACATGTGTAGTCATACACAGAGGCGTGTACACGTAAACAGTTTGAACTTGCTGCTTTGCATGCATTGAATGTCTGCAACTTGTGAGGATACGACACATTTACTGAGTGTGGTGCATTCAGATGAATCTACAGGGCTATGAGGATAGATAGTTGCCATACATTTAAAAGTTGTacgaagtgttttttttaaagtata
>XM_039816624.1
GGGCGGGTCCCTCCTAGAAGTTGCGTCCTGTCCTAGCCACACTGTAGTTGAGGCGACGCAAGACCGCTCTGCAGTTGTTGGAGAGAGAGGTTGGCCGTCCGCTGAAAACAAACTGCATATTAACATCAGCTGGTGTCATAGCGAGGCAGTGAGTAGTGAGGCATTATGGGCAACACAAGTGACAGGGTGTCTGGAGAACGCCATGGAGCCAAAGCCCACCGCTCGGACAGCAGCGGCAGTCACAAAGACCAAGAGCCCAGCGGCAAGATGGTGGACAGCACAGATGACCCCAACATCTTCAACACCCACGGGCCAGAGTCCAAGGCGTTAGAAGAGAAAGAATCAGATGTGATTGAGCAGATGAACACTGGTCCTCAGGCTCGACCCACGGTCATCCGCTGGGCCGGGGGGGGGAAGGAGGTCTACATAGCCGGCTCCTTTAATAACTGGAACACCAAGATACCACTAAATAAGAGCCATAATGACTTTGTAGCGATCTTGGACCTGCCAGAAGGAGAGCACCAGTACAAGTTTTTTGTAGATGGACAGTGGGTCCACGATCCCTCAGAGGCGGTTGTAACCAGTCAGCTCGGCACCATCAACAACCTGATCCAGGTGAAGAAGTCGGACTTTGAGGTGTTTGACGCCCTGCATGTAGACTCTCTGGAGTGCTCCGACACATCAGaccTGTCCAGCTCCCCCCCAGGTCCGTATGGGCAGGAGCAGTACAGCTTCAGACCTGAGGAGCATTTCAAAGCCCCACCCATCCTCCCTCCTCACCTCCTCCAAGTCATCCTCAACAAGGACACCAACATATCCtgtgACCCCGCCCTGCTGCCTGAACCCAACCACGTCATGCTAAACCACCTTTACGCCCTCTCGATTAAGGACGGAGTAATGGTGCTGAGCGCGACTCACCGATACAAGAAGAAATACGTCACCTCTCTGCTTTACAAGCCCATCTAAGCCGCAACTTGGGTGCTTCACGCTGCGTTTAGAGAACAGCATGTTTGTATTCTGctgggtttttttctttttttctttctcagtggCATCAGATTTAGCCAAAACGTGCACTGAAACTAGACAACAGGCCAGTGGCTGTGACTGCGGCTTGGTTTTGGAAAAAGGTTGCACTTCTCTCTACATAGGGCTCTGAACTAAaagaaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtcggAGAGAGATGGAAACCATACTGTGGCTTTTACCTGTGACATCTACAGACCGATAAGAGAGAGACTGACTGAATCACTGTGTGTATTTGAGTGTTTGCTGCCCCTTGTGAATATATGCTTGTCTGCGTTCAAAACGAGATTTTATTTAATAGCGTGGTGTAAAGGAAGAGGGGTGATCTGTGAAAGATCCGTTTCTTTCCATGGGGATTTTAAGGATGCTCTCCTAAAGTGAgggctttttgagtgttattgaTGCGGATCAGCAGTTAGAGTTGAAAGTATTGTGTTAATTAAGTCAGAATAACAGAACGGCCCAGAGCCGAGGTCTAGAATAGATGCTACAGAGAGCAGCAGGCTTGGCTTTGGTTGAACATAACGTGCAATAACCTACATCTTATTTTGTCGGCACATATTAGATATATTATTAAATTTCTCCCAGTTCAGCCGTCATTCAGTGGCATCTACAACGTGAACTAAACTACCAACTAAGTCCAAGATTCCCGTTGTGTTAATGTAACGGTCACTAAACATAGATGGAGTAGAAGGACCCACTTTCCAGATGGCGAATGGAGGTCAAAGGTTGATGTTTAGTTCTGCTGTTGCCTTTATCTTGACATAATTTAGCACTTTACCATCCTGTGAGCAGGAGCGATATaagcttttttttaagtatgcaGCGGACAACTCTTACTGTATTGTAGCTTCTCTGCATTATAGAACCCAATTtgtgcttttttccccctttttgtcAAAtagtaatgtactgtatgtatctgTTACATGTGTAGTCATACACAGAGGCGTGTACACGTAAACAGTTTGAACTTGCTGCTTTG
>XM_039816625.1
taAATGCTACTGAAGGGCGGGTCCCTCCTAGAAGTTGCGTCCTGTCCTAGCCACACTGTAGTTGAGGCGACGCAAGACCGCTCTGCAGTTGTTGGAGAGAGAGTAGCGAGGCAGTGAGTAGTGAGGCATTATGGGCAACACAAGTGACAGGGTGTCTGGAGAACGCCATGGAGCCAAAGCCCACCGCTCGGACAGCAGCGGCAGTCACAAAGACCAAGAGCCCAGCGGCAAGATGGTGGACAGCACAGATGACCCCAACATCTTCAACACCCACGGGCCAGAGTCCAAGGCGTTAGAAGAGAAAGAATCAGATGTGATTGAGCAGATGAACACTGGTCCTCAGGCTCGACCCACGGTCATCCGCTGGGCCGGGGGGGGGAAGGAGGTCTACATAGCCGGCTCCTTTAATAACTGGAACACCAAGATACCACTAAATAAGAGCCATAATGACTTTGTAGCGATCTTGGACCTGCCAGAAGGAGAGCACCAGTACAAGTTTTTTGTAGATGGACAGTGGGTCCACGATCCCTCAGAGGCGGTTGTAACCAGTCAGCTCGGCACCATCAACAACCTGATCCAGGTGAAGAAGTCGGACTTTGAGGTGTTTGACGCCCTGCATGTAGACTCTCTGGAGTGCTCCGACACATCAGaccTGTCCAGCTCCCCCCCAGGTCCGTATGGGCAGGAGCAGTACAGCTTCAGACCTGAGGAGCATTTCAAAGCCCCACCCATCCTCCCTCCTCACCTCCTCCAAGTCATCCTCAACAAGGACACCAACATATCCtgtgACCCCGCCCTGCTGCCTGAACCCAACCACGTCATGCTAAACCACCTTTACGCCCTCTCGATTAAGGACGGAGTAATGGTGCTGAGCGCGACTCACCGATACAAGAAGAAATACGTCACCTCTCTGCTTTACAAGCCCATCTAAGCCGCAACTTGGGTGCTTCACGCTGCGTTTAGAGAACAGCATGTTTGTATTCTGctgggtttttttctttttttctttctcagtggCATCAGATTTAGCCAAAACGTGCACTGAAACTAGACAACAGGCCAGTGGCTGTGACTGCGGCTTGGTTTTGGAAAAAGGTTGCACTTCTCTCTACATAGGGCTCTGAACTAAaagaaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtcggAGAGAGATGGAAACCATACTGTGGCTTTTACCTGTGACATCTACAGACCGATAAGAGAGAGACTGACTGAATCACTGTGTGTATTTGAGTGTTTGCTGCCCCTTGTGAATATATGCTTGTCTGCGTTCAAAACGAGATTTTATTTAATAGCGTGGTGTAAAGGAAGAGGGGTGATCTGTGAAAGATCCGTTTCTTTCCATGGGGATTTTAAGGATGCTCTCCTAAAGTGAgggctttttgagtgttattgaTGCGGATCAGCAGTTAGAGTTGAAAGTATTGTGTTAATTAAGTCAGAATAACAGAACGGCCCAGAGCCGAGGTCTAGAATAGATGCTACAGAGAGCAGCAGGCTTGGCTTTGGTTGAACATAACGTGCAATAACCTACATCTTATTTTGTCGGCACATATTAGATATATTATTAAATTTCTCCCAGTTCAGCCGTCATTCAGTGGCATCTACAACGTGAACTAAACTACCAACTAAGTCCAAGATTCCCGTTGTGTTAATGTAACGGTCACTAAACATAGATGGAGTAGAAGGACCCACTTTCCAGATGGCGAATGGAGGTCAAAGGTTGATGTTTAGTTCTGCTGTTGCCTTTATCTTGACATAATTTAGCACTTTACCATCCTGTGAGCAGGAGCGATATaagcttttttttaagtatgcaGCGGACAACTCTTACTGTATTGTAGCTTCTCTGCATTATAGAACCCAATTtgtgcttttttccccctttttgtcAAAtagtaatgtactgtatgtatctgTTACATGTGTAGTCATACACAGAGGCGTGTACACGTAAACAGTTTGAACTTGCTGCTTTG
>XM_039816626.1
AAGACAACGTGCTGAGCTAGCTAGGCGTTAGAAAGTGACAGGTAGCAGCAAGCTAACTGTAAGCTAAAAATATTCTCATGCCGAAGTGGTTTGAGGTGGGCACAGCTGAACTGCCAGAGGGGACACGTTTTAGCGAGGCAGTGAGTAGTGAGGCATTATGGGCAACACAAGTGACAGGGTGTCTGGAGAACGCCATGGAGCCAAAGCCCACCGCTCGGACAGCAGCGGCAGTCACAAAGACCAAGAGCCCAGCGGCAAGATGGTGGACAGCACAGATGACCCCAACATCTTCAACACCCACGGGCCAGAGTCCAAGGCGTTAGAAGAGAAAGAATCAGATGTGATTGAGCAGATGAACACTGGTCCTCAGGCTCGACCCACGGTCATCCGCTGGGCCGGGGGGGGGAAGGAGGTCTACATAGCCGGCTCCTTTAATAACTGGAACACCAAGATACCACTAAATAAGAGCCATAATGACTTTGTAGCGATCTTGGACCTGCCAGAAGGAGAGCACCAGTACAAGTTTTTTGTAGATGGACAGTGGGTCCACGATCCCTCAGAGGCGGTTGTAACCAGTCAGCTCGGCACCATCAACAACCTGATCCAGGTGAAGAAGTCGGACTTTGAGGTGTTTGACGCCCTGCATGTAGACTCTCTGGAGTGCTCCGACACATCAGaccTGTCCAGCTCCCCCCCAGGTCCGTATGGGCAGGAGCAGTACAGCTTCAGACCTGAGGAGCATTTCAAAGCCCCACCCATCCTCCCTCCTCACCTCCTCCAAGTCATCCTCAACAAGGACACCAACATATCCtgtgACCCCGCCCTGCTGCCTGAACCCAACCACGTCATGCTAAACCACCTTTACGCCCTCTCGATTAAGGACGGAGTAATGGTGCTGAGCGCGACTCACCGATACAAGAAGAAATACGTCACCTCTCTGCTTTACAAGCCCATCTAAGCCGCAACTTGGGTGCTTCACGCTGCGTTTAGAGAACAGCATGTTTGTATTCTGctgggtttttttctttttttctttctcagtggCATCAGATTTAGCCAAAACGTGCACTGAAACTAGACAACAGGCCAGTGGCTGTGACTGCGGCTTGGTTTTGGAAAAAGGTTGCACTTCTCTCTACATAGGGCTCTGAACTAAaagaaacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtcggAGAGAGATGGAAACCATACTGTGGCTTTTACCTGTGACATCTACAGACCGATAAGAGAGAGACTGACTGAATCACTGTGTGTATTTGAGTGTTTGCTGCCCCTTGTGAATATATGCTTGTCTGCGTTCAAAACGAGATTTTATTTAATAGCGTGGTGTAAAGGAAGAGGGGTGATCTGTGAAAGATCCGTTTCTTTCCATGGGGATTTTAAGGATGCTCTCCTAAAGTGAgggctttttgagtgttattgaTGCGGATCAGCAGTTAGAGTTGAAAGTATTGTGTTAATTAAGTCAGAATAACAGAACGGCCCAGAGCCGAGGTCTAGAATAGATGCTACAGAGAGCAGCAGGCTTGGCTTTGGTTGAACATAACGTGCAATAACCTACATCTTATTTTGTCGGCACATATTAGATATATTATTAAATTTCTCCCAGTTCAGCCGTCATTCAGTGGCATCTACAACGTGAACTAAACTACCAACTAAGTCCAAGATTCCCGTTGTGTTAATGTAACGGTCACTAAACATAGATGGAGTAGAAGGACCCACTTTCCAGATGGCGAATGGAGGTCAAAGGTTGATGTTTAGTTCTGCTGTTGCCTTTATCTTGACATAATTTAGCACTTTACCATCCTGTGAGCAGGAGCGATATaagcttttttttaagtatgcaGCGGACAACTCTTACTGTATTGTAGCTTCTCTGCATTATAGAACCCAATTtgtgcttttttccccctttttgtcAAAtagtaatgtactgtatgtatctgTTACATGTGTAGTCATACACAGAGGCGTGTACACGTAAACAGTTTGAACTTGCTGCTTTG

Function

symbol description
prkab2 Predicted to act upstream of or within fatty acid biosynthetic process and regulation of catalytic activity. Orthologous to human PRKAB2 (protein kinase AMP-activated non-catalytic subunit beta 2).

NR:

description
PREDICTED: 5'-AMP-activated protein kinase subunit beta-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159178 True 3070 TUCP 0.44 6 26590830 26600072
XM_039816624.1 False 2091 mRNA 0.48 8 26590796 26599934
XM_039816625.1 False 2056 mRNA 0.48 8 26590782 26599934
XM_039816626.1 False 2083 mRNA 0.47 8 26591010 26599934

Neighbor

gene id symbol gene type direction distance location
LOC120568699 slc25a24,LOC104964315,LOC103357622 coding upstream 2211 26580603 ~ 26588571 (+)
LOC120568740 NA coding upstream 25137 26559608 ~ 26565645 (+)
LOC120567674 NA coding upstream 31141 26554070 ~ 26559641 (+)
LOC120567673 NA coding upstream 37701 26534496 ~ 26553081 (+)
fndc7a NA coding upstream 55083 26524945 ~ 26535699 (+)
zgc:85843 tm6sf2,LOC104924838,LOC102294137,LOC102201647 coding downstream 66432 26666504 ~ 26672258 (+)
LOC120569005 LOC106935698,LOC103153539 coding downstream 192130 26792202 ~ 26813425 (+)
ndufa13 ndufa13,LOC102786334 coding downstream 215612 26815684 ~ 26819017 (+)
LOC120567603 LOC103357602,LOC108239446,LOC104948981,LOC105934574 coding downstream 290863 26890935 ~ 26899765 (+)
LOC120568413 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 coding downstream 358594 26958666 ~ 26963795 (+)
G118009 NA non-coding upstream 276152 26314265 ~ 26314630 (+)
G117938 NA non-coding upstream 381911 26208356 ~ 26208871 (+)
G117933 NA non-coding upstream 385952 26204611 ~ 26204830 (+)
G117917 NA non-coding upstream 524943 26058254 ~ 26065839 (+)
G117847 pax7,LOC106964226,LOC102296763 non-coding upstream 674060 25916500 ~ 25916722 (+)
G118115 NA non-coding downstream 2584 26602656 ~ 26674451 (+)
G118135 NA non-coding downstream 62210 26662282 ~ 26664844 (+)
LOC120569009 NA non-coding downstream 143669 26743741 ~ 26763260 (+)
LOC120569008 NA non-coding downstream 181295 26781367 ~ 26784859 (+)
G118164 NA non-coding downstream 221171 26821243 ~ 26824078 (+)
wdr47a wdr47,LOC102290984 other upstream 93973 26421454 ~ 26496809 (+)
ccl20a.3 NA other upstream 172774 26416508 ~ 26418008 (+)
G118011 eif4e2 other upstream 188704 26395426 ~ 26402078 (+)
ece2a ece2,LOC103356888 other upstream 281235 26217998 ~ 26309547 (+)
LOC120568800 NA other upstream 373741 26214432 ~ 26217041 (+)
G118149 NA other downstream 165420 26765492 ~ 26769911 (+)
LOC120567599 LOC101062208 other downstream 239106 26839178 ~ 26857394 (+)
LOC120568791 LOC103357601 other downstream 278483 26878555 ~ 26938882 (+)
G118234 sugp1 other downstream 283487 26883559 ~ 26886030 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other downstream 546989 27147061 ~ 27177206 (+)

Expression


Co-expression Network