G118175


Basic Information

Item Value
gene id G118175
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26661621 ~ 26665952 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159297
TATCCCGGTGACATTGGCATGTGTCATGCAAATCCTGTCATGGATTATTGTACAACATCTTGATACTGACACATACAGTCTGGTTCTCCTGACAGCCTCATCCTGGGACACACTCAGAGACCTCACGATGCTTTTTCATTACATCCATTCTTCCGCTTagtctcttttttcccccctggtTCCTTCTTTACGGGAAGACTTGGTTTTCAATTAAgtttttcatctttttaaaCCTTTCAGCTTTTCTACACAGCATGACACACGTCTTCTACTGGGGTCTGCACCCAGTCTCTTGGTTCATCCTCTTTGCGAATATTGCCATCAGCATCATAGAATGGCAATTTCTCATGTCTCAGTTTTGCAAAGTTCCAGAGCCACCAAAAGAAGATGAATCTAAAGCTTAAAGAAACTTCTGAGAGAGTAGAAAAGCTTATTATTGTTGGATTACCTGCGCACTTAATCATTGATGAGCCATCTGCGTATACGACACACACGCCAATTTGGAACTCCGTTCATTCACAAGTCAAAGAAAAGAACTGAGGGGCCGTTTCAAGTCTTGATTATGAGACTGGATTCTTGGCCCTAAACCAGTGGAGGATGATTCAGAGGAAGGGAGAGCAGAAATAGAAGAAGAGCGGCGAGTGAGCGTTTACAGTACGATGGAGAAAGACCGGCTGAAGATGGAGAAGGAAAAGGACGGGCCGCTGCCCGGTTTCTACCGGGGAGATGAGGGCCGCGGTCGTCcatccacccctcctccactgAGAAGCGCCATCACTTCATCATACCCCGGAGAAAAAAGGATGTCTGCTCATAGTGTGAGCTTCGCCTGCCCCATGACCCCGTATGCCACTTCCCTTTGAGTTGTCACTCTGTCACAGCTGTAGTTCAGATCAGTTTTTGTCGCATATCTCCTTCCAGTCAACAATGTTGTGACTTTGCTGTAGTGATGCATGCATAAGCTAAAGCATTTTAGTTCAATATAAAACAATGTGCTCAACACTTGTAGTTTGTACTCATAAGAAACAAATGCTTACTTTTGATTACTTACTAAAAATGGATGTAAACATGGTTCATTCAATATACATTCCACTATATCGTTGTTTGCTGCCCATCAATTTCTCATGCGAAAAGTATGTAAGCTATCTTCAAAGATGTTGATGTGAGatgtaaaaaatacattttctttcaatAACTGCCATTTAAAATCCAAAGATTGTGTAACTCGATCAAATATGTATAACTTTCATGACAAAGTGTAGCAAAATTGCATATGAATTGCCATTTTTGTGCATTTTCCTCACCGACCTGTCAAACTGCAATAATAACCGCAGTTTTTCCCCTTACATCGCATTCTGTATATTGCTGTGAAGACAAACATGTCGGTGTGATCTGTTCTGGTGTTGGACTAAGCTTCTCTCCATTAAACAACTGAATAATATAAGAGTGACGTTTGTCTTGTCTGTGTCCTTTAATCCATCTTACCTTCCTCTAATACCTGGT
>TU159298
CTACATCTAATGCAACGTTATCTTCTGTAACAAAGCGGCTGAAGAGGattatgctgctgctgctgctgcttccacAGAAACGTAGCAGCCAGTGGAAAGAGAGAGTCAAGAGGGGTGGGGAGTCCAGTGTAGAATCGGACAGAGAACATACATACAACCCTTCACCCACACAGCAGACACTCAAGTTTTTTGAGGTGACACAGATTCTTGAAGAGTCTGATGCAATGCTGCACCCTTTAATCATCGGCATTATTACCGTAAACACCTCTCTAACAGTGGTCTACTGGGCCTTTGTCCTGAGCGATGTCTACTACAAGTGGCTGTCGGAGGCAGAAGACAAACCCAAGAAGTCGGTCACCCCGGCCTGAGGGAGTCACAGTCAATATGGACTGACTGAATTACTGGGtgttttgttctctttttttttgtgcttagTACTAGTGAGCAAGAGCAGTTCAGCTTGTAGTGCTTTCTGTGAGTCTGATTTTGGCTTTCTGTTTTACCTGGAGAGGACTTGGAAACCATACTTTAAATGTTTTACTGAACTGAATGGATCCTGCAAGTTAATAAGAAAGGAGTCCTTCTTACAGAGCCATCTGCGTATACGACACACACGCCAATTTGGAACTCCGTTCATTCACAAGTCAAAGAAAAGAACTGAGGGGCCGTTTCAAGTCTTGATTATGAGACTGGATTCTTGGCCCTAAACCAGTGGAGGATGATTCAGAGGAAGGGAGAGCAGAAATAGAAGAAGAGCGGCGAGTGAGCGTTTACAGTACGATGGAGAAAGACCGGCTGAAGATGGAGAAGGAAAAGGACGGGCCGCTGCCCGGTTTCTACCGGGGAGATGAGGGCCGCGGTCGTCcatccacccctcctccactgAGAAGCGCCATCACTTCATCATACCCCGGAGAAAAAAGGATGTCTGCTCATAGTGTGAGCTTCGCCTGCCCCATGACCCCGTATGCCACTTCCCTTTGAGTTGTCACTCTGTCACAGCTGTAGTTCAGATCAGTTTTTGTCGCATATCTCCTTCCAGTCAACAATGTTGTGACTTTGCTGTAGTGATGCATGCATAAGCTAAAGCATTTTAGTTCAATATAAAACAATGTGCTCAACACTTGTAGTTTGTACTCATAAGAAACAAATGCTTACTTTTGATTACTTACTAAAAATGGATGTAAACATGGTTCATTCAATATACATTCCACTATATCGTTGTTTGCTGCCCATCAATTTCTCATGCGAAAAGTATGTAAGCTATCTTCAAAGATGTTGATGTGAGatgtaaaaaatacattttctttcaatAACTGCCATTTAAAATCCAAAGATTGTGTAACTCGATCAAATATGTATAACTTTCATGACAAAGTGTAGCAAAATTGCATATGAATTGCCATTTTTGTGCATTTTCCTCACCGACCTGTCAAACTGCAATAATAACCGCAGTTTTTCCCCTTACATCGCATTCTGTATATTGCTGTGAAGACAAACATGTCGGTGTGATCTGTTCTGGTGTTGGACTAAGCTTCTCTCCATTAAACAACTGAATAATATAAGAGTGACGTTTGTCTTGTCTGTGTCCTTTAATCCATCTTACCTTCCTCTAATACCTGGT

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process
GO:0003008 system process biological_process
GO:0004112 cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU159297 False 1503 lncRNA 0.42 3 26661621 26665181
TU159298 True 1624 TUCP 0.43 3 26661621 26665952

Neighbor

gene id symbol gene type direction distance location
LOC120567967 LOC104952378,LOC100703940,LOC102297870,LOC103357619 coding downstream 8663 26604861 ~ 26652958 (-)
LOC120568700 fam102b,LOC103357623 coding downstream 80402 26572397 ~ 26581219 (-)
prpf38b prpf38b coding downstream 89817 26565990 ~ 26571804 (-)
gpsm2 gpsm2 coding downstream 152821 26496871 ~ 26508800 (-)
ccl20a.4 NA coding downstream 249518 26411167 ~ 26412103 (-)
LOC120568933 LOC104965402,LOC103357616,LOC102791396 coding upstream 8081 26674033 ~ 26715435 (-)
LOC120569007 LOC103357614 coding upstream 99529 26765481 ~ 26772945 (-)
armc6 armc6,LOC102784696 coding upstream 111085 26777037 ~ 26781098 (-)
LOC120568902 NA coding upstream 159764 26825716 ~ 26833382 (-)
stk11 stk11 coding upstream 189383 26855335 ~ 26880767 (-)
G118165 NA non-coding downstream 60236 26532167 ~ 26601385 (-)
G118076 NA non-coding downstream 181943 26477463 ~ 26479678 (-)
G118075 NA non-coding downstream 186665 26473887 ~ 26474956 (-)
LOC120569074 NA non-coding downstream 234823 26421450 ~ 26426798 (-)
G118002 NA non-coding downstream 352295 26308787 ~ 26309326 (-)
G118186 NA non-coding upstream 65925 26731877 ~ 26732084 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding upstream 294448 26960400 ~ 26963752 (-)
G118321 NA non-coding upstream 414055 27080007 ~ 27142908 (-)
G118328 NA non-coding upstream 453080 27119032 ~ 27190233 (-)
G118337 NA non-coding upstream 508600 27174552 ~ 27197648 (-)
camk2n1a camk2n2 other downstream 342026 26315770 ~ 26319595 (-)
G117732 NA other downstream 1738303 24922203 ~ 24923318 (-)
G117560 NA other downstream 2125125 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 2805000 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 3170009 23468620 ~ 23491612 (-)
cirbpa cirbp other upstream 153886 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 977375 27643327 ~ 27675360 (-)
G118524 NA other upstream 1047515 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 1480319 28146271 ~ 28152770 (-)
G118764 NA other upstream 2320139 28986091 ~ 28986319 (-)

Expression


Co-expression Network