G118328


Basic Information

Item Value
gene id G118328
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27119032 ~ 27190233 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159494
TCAGTCATGAAAGAGCTGCATTTATTTGACATTGACACAGGGGTACAGAGACAAATAATAAATCTTGTAATGAGGTACAGTACATCTTGTTATGAGGTACATCAGTGTTCTATTTGTTTTTCTGAGGGTACACACTCTCGGTTACGGATTAAACTCAAATGTAGCTGGCAAAACAGTCCTAATAATTATTTTGGCAATACAAATACCATGACTTAAACTCCCAAACCATGTAAACTCAAAAAGGTTATTGTGAGAAATAACACTGCTTTGAACGGTCAAACAATCAAATCAAACAAACTAAATGTGATTTTACACAGCCACGAGATtgctgtgtgcatgtaaacatactgcaACCTTTTTATGCTTTCAAACAAACTACCTATAGTGCCagagtaaaatataaaagagcaacatgttaaaaaagaaaCGCACAACGTCAACATTAACTGATACattcaacacacatacacacacacacacgtcagtcACATACatcaggtttgtgtttttaacttTGAGCTTGAACAGCTGTCAACTAAATGTAACACTGCATTGTTTAGAACATCATCCACAACTGCCGTAAACTGCCTTAAAAGTACAACTACTTACAGGAACAATAATTTCCTTTGACTCACTATACTATCAATAGTGAAGTGGTGGTCATTCCTGAAAACACTGAACTGTATAGAGAGTCTTAAGAAAGTTGCCATACATTAGTGGAGGTAAAAAATTAACTGAAAGCACCCATCCAGGATTACACTGTCAcatgtaagaaaaaaatacaaataaagaaaacagtCTTTGTTAAGGTAAACACAATCTGCAGAATGTCTGCTATTAGGGTCTATTTCAGTTAAAAGTGTATACAAAATCCTTGTGGAGCCaattatttgaaaatgaaagtttACCAGCAAACATGTCACAACAAGCCTGTGGGAGAGATGAGAAAGAGACATGTTACATGCACTGTAGTTGTCCTAACAATGAGGCTAAACAGAGGCAATGGGTgaaccaatttaaaaaataaaaaaaaaggattcagCAACACTGGTACCAGCCCTGCAGTTTTGAGTACCTTGGCTATAATTCCTCCTTGTCCACCTGTTCAACCTTCTCCTCCACTTTGTTGGCTGCTGCTGCATCTGCAGCGGTGTCCTCTATATGAGCTAACATATCAGCCatcacctgttcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159494 True 1193 lncRNA 0.37 2 27119032 27190233

Neighbor

gene id symbol gene type direction distance location
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding downstream 11306 27095802 ~ 27107726 (-)
LOC120567768 NA coding downstream 116980 26998041 ~ 27002052 (-)
plekhj1 plekhj1 coding downstream 128259 26986732 ~ 26990773 (-)
LOC120568414 LOC102790141,LOC102302803,LOC104929656,LOC105934591,LOC102195635,LOC100696847,LOC101486463 coding downstream 133986 26977016 ~ 26985046 (-)
sugp1 sugp1 coding downstream 229135 26881797 ~ 26889897 (-)
LOC120567762 LOC101482480,LOC102795251 coding upstream 20782 27211015 ~ 27244441 (-)
LOC120567764 LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414 coding upstream 62301 27252534 ~ 27261346 (-)
sirt6 sirt6 coding upstream 105137 27295370 ~ 27307660 (-)
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding upstream 120072 27310305 ~ 27317595 (-)
sema4e LOC103364382 coding upstream 138849 27329082 ~ 27338096 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding downstream 155280 26960400 ~ 26963752 (-)
G118186 NA non-coding downstream 386948 26731877 ~ 26732084 (-)
G118165 NA non-coding downstream 517647 26532167 ~ 26601385 (-)
G118076 NA non-coding downstream 639354 26477463 ~ 26479678 (-)
G118075 NA non-coding downstream 644076 26473887 ~ 26474956 (-)
G118339 NA non-coding upstream 8349 27198582 ~ 27199689 (-)
G118401 NA non-coding upstream 104050 27294283 ~ 27295300 (-)
G118482 NA non-coding upstream 388735 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 412168 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 437653 27627886 ~ 27664712 (-)
cirbpa cirbp other downstream 294462 26819838 ~ 26824570 (-)
G118175 NA other downstream 453080 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 799437 26315770 ~ 26319595 (-)
G117732 NA other downstream 2195714 24922203 ~ 24923318 (-)
G117560 NA other downstream 2582536 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 453094 27643327 ~ 27675360 (-)
G118524 NA other upstream 523234 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 956038 28146271 ~ 28152770 (-)
G118764 NA other upstream 1795858 28986091 ~ 28986319 (-)
G118856 NA other upstream 2230146 29420379 ~ 29420652 (-)

Expression


Co-expression Network