G118337


Basic Information

Item Value
gene id G118337
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27174552 ~ 27197648 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159504
TTATCCTAGAGTTCAAAATATGTCTGCGAGCCACACACTTGACAGTCAAGAGTCAAAAACTAGTAGAAAACGCTAAAACGAGCCGATCGCAGTGTAACAGACAGGATGTGAGGAGGAAAAGGTCCTGGTGTGGATGGATCTGCGCAAAGTCCTCCTGTAAGACGGTGAGCGGGAAGTGAAGGAGAGGGGCAGCAGACAGAAACCAGGCCTTCTCATGGTGAGGGCACATAATGATGCCAACGTGGAAACAGCATGAGCGGGCATTACACGCGGGCATCGGGCatcgggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgagatgTAAAGGGATTGTCAGGCAGCCCAAATGTACAGAGAACTGACCTCAGACACATTCCTACAGTATCACTAATGGTATGTTTCTCACTTATTAAAAAAGGATAATTAATGTGAATCAATGCGGCAGCCACATTTCAAATGTGGGGCATCCAAATTCATCCATCATGTTATTGAATTCGATCAGGAAGTAAGGAGGTGTCTATTAATAGCATTCTTTTGTCATTACTGACGGCAAAAAAATGCATGGCAATGAGAAGCATGAAGTCATCCTTAGGAGGTCCCTCGGCTCTATTGTTTTCAGATAGGCGCCTGACTAAATGCggacattaaaaaaaaataaaaataaaaataaaaaaacactaaatgCTCAAAAACACAGCAACAACCAAAACAAGTCCATCAATGGCAAGTAAATTCTCTACAGGGTAGCAGGTACACTCATGATCCCTTTCAATACCCAATTATTTCTGCCTTCTCGCAAAATGTGATTTACCACAATACAAATTGCTTCGAGACTTAAGTTTAGTAAGTTCCTAATGCTGTAACAGAGTCTTTAGGTATGATTTGACAGGGGCAGGCTGATGGGACACTGGCTGACCACATGGCTGTGTGACAGTCATGATGGTGAAGGAGCTGAGCAGTGAGGATGACATCTGTACACTCCAATCCAATCAGCTGAGATGTGCATCTGCACATTTGATTCAACATCAGTGTGGTTCCTGGATTTGTATTGAGTCTTTGCTCAGGTTTGTGTCGGTGGAGGGTCTCTCTCTGGCAGTCTCTGTTTCACTTGCATTGCAGTGACCGTAACAGATGTACAGGACTTAAAGAGAGGTAAGATTCAGGGATCCACAGTtaagaataaacaaaaaaataacccACCACATGGGAGTCAGTGACTGTGGCACCTTTTTAGTCAaagcaagaaataaaaaatacatctaGAAATACCAGAATACCGACAAAAAAACGAGTTGTCTCTCTGATTGCCCAGTTAGTTGCTGGAGGTCTCCAAACCTGCCTCTGTAATTCAGTCATCACAAAAGGAGATAATGATTTTATCTTAACACTATGCATTAGGCCTCTTTTGGGCACATGTTTAAAACGGGTTTTGTTCAATCATAAGATAATAAACCCAGTTGTCCCTCTTTGCCTGTGAAGAATGTAAGACCTGCTTTTCAGATGGGAATGCCAATAATCATCCAACAATACAAATCCTAACTCTGCTTACACAAGCAGTTGATCCAAAAAGTTTCATTTGATCCAAACAAGTTTTGCTCCCAACACGTAAAgcaatttttcaaaatgtcttacAAAAACACGATCATAAGAATGTCCTTATGTCCAATTTCCACTGTCTCCAAACCGGTGTCCTCGGTTCAAAGTGTTGTCATGTTAAGATTAATACATTTCCCCCTCTTTCTGTAAGAGTGtgcttgttacttttgtattcatagtcAGGAATGTGGCCACCTGCTTTGTCAGTaatgaggtgtgtgtgcgtgtgtgctttCCAAAAGTTGAttaacacacactgagatgcatGACAATGATAGATTAAGGCCACGTGTTCTAAGGGCTGTACAATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159504 True 2038 lncRNA 0.42 2 27174552 27197648

Neighbor

gene id symbol gene type direction distance location
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding downstream 66826 27095802 ~ 27107726 (-)
LOC120567768 NA coding downstream 172500 26998041 ~ 27002052 (-)
plekhj1 plekhj1 coding downstream 183779 26986732 ~ 26990773 (-)
LOC120568414 LOC102790141,LOC102302803,LOC104929656,LOC105934591,LOC102195635,LOC100696847,LOC101486463 coding downstream 189506 26977016 ~ 26985046 (-)
sugp1 sugp1 coding downstream 284655 26881797 ~ 26889897 (-)
LOC120567762 LOC101482480,LOC102795251 coding upstream 13367 27211015 ~ 27244441 (-)
LOC120567764 LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414 coding upstream 54886 27252534 ~ 27261346 (-)
sirt6 sirt6 coding upstream 97722 27295370 ~ 27307660 (-)
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding upstream 112657 27310305 ~ 27317595 (-)
sema4e LOC103364382 coding upstream 131434 27329082 ~ 27338096 (-)
G118321 NA non-coding downstream 31644 27080007 ~ 27142908 (-)
G118308 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 non-coding downstream 210800 26960400 ~ 26963752 (-)
G118186 NA non-coding downstream 442468 26731877 ~ 26732084 (-)
G118165 NA non-coding downstream 573167 26532167 ~ 26601385 (-)
G118076 NA non-coding downstream 694874 26477463 ~ 26479678 (-)
G118339 NA non-coding upstream 934 27198582 ~ 27199689 (-)
G118401 NA non-coding upstream 96635 27294283 ~ 27295300 (-)
G118482 NA non-coding upstream 381320 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 404753 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 430238 27627886 ~ 27664712 (-)
cirbpa cirbp other downstream 349982 26819838 ~ 26824570 (-)
G118175 NA other downstream 508600 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 854957 26315770 ~ 26319595 (-)
G117732 NA other downstream 2251234 24922203 ~ 24923318 (-)
G117560 NA other downstream 2638056 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 445679 27643327 ~ 27675360 (-)
G118524 NA other upstream 515819 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 948623 28146271 ~ 28152770 (-)
G118764 NA other upstream 1788443 28986091 ~ 28986319 (-)
G118856 NA other upstream 2222731 29420379 ~ 29420652 (-)

Expression


Co-expression Network