G118420


Basic Information

Item Value
gene id G118420
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27386896 ~ 27387956 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159604
aGTACTCGAGTACTGGACTTGGACCTCGAgtcgctattctctggactccCGACTCGACTCAGAGTCGAACTCAGGTAATGGTGACTCGACTCGGACTCAACTCgactcttctttggtgactTGGACATGGACTCAGACTCGAACACTGAAGACtcgagacttgactcggacttgaCAGTTGGTGACTCGACTACAACCCTCCATCTTTTCTATTTCTCATTCCCTGTTCCTTTTGGATCTCCCCCCAGCTCCTGTTACCACTCTACACTGTAGCGCATCTGTTTCTTATTCCCTCTCAGTTTCTCCTTATCAGTTTCATTTTTCATACACCGTAGAATAAATAGAATGTGAGTTCAATCTCAGGTCATTAGGTACATATTTATTTCACTGAGCACTCACACTCCTCCAACTCACATGCATTACAGAAAGAGCACAAACATACAATATATTCTTGTAGCGTCCTTGGCCTGCCAGTTACATCATCGTAAATGAGCTATTGTGAAATCTTATTCCATTTATCACATATAAAAATCATCCTGTTTTGGAGGTTAAACAGATCATGTACTGTAGTAAAACCTGATTTCAGCTTAGAGAGGAAGAGTTAGTCAACACCTGACCAGTGCAAATCACTTTCATATCATAATATTTTGTCCTATGTATAGTTTTAACCTGAACCAAGCCCTGAGCACTGCACTGCAGTTAATCAAGGATTTCCTGGGGATTAAAGGCcctgaaaaattattttctcaatcagATTACTGTGAGTGATTTGATCCTACGCGAGTGTTCTGCAGAAGAGTTTGAGTAATTCTACATAAGAAATGTCTgtatttctgtttctctctgtgctcTTCTCGTTGGTTTGAAGGTGACAAGACTCATACTTATACTCGTACTTCCGTGGACCAATCAGGATTTTGTACTATTTGTACTAGTTGCAGGATTGTTTGGTTACTGTCAATCAAACATGCTCAAACCACACCTACACAGATAAAGAAGATTAGCTgagttttgaaatgtttaaatctTTATAAATAACac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159604 True 1041 lncRNA 0.40 2 27386896 27387956

Neighbor

gene id symbol gene type direction distance location
cactin cactin coding upstream 58045 27318329 ~ 27328851 (+)
LOC120567742 LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336 coding upstream 95361 27286920 ~ 27291535 (+)
LOC120567815 LOC104964637 coding upstream 105566 27261660 ~ 27281330 (+)
LOC120567763 btbd2,LOC103376164,LOC107096948 coding upstream 135625 27246293 ~ 27251271 (+)
LOC120568858 mex3d,LOC106923040,LOC106951442,LOC103151246,LOC103479451,LOC105934582,LOC107096960,LOC101078722,LOC104929649 coding upstream 190690 27191141 ~ 27196206 (+)
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding downstream 46157 27434113 ~ 27442129 (+)
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding downstream 224119 27612075 ~ 27632981 (+)
LOC120567796 NA coding downstream 298208 27686164 ~ 27688056 (+)
epha4b LOC103372263 coding downstream 351036 27738992 ~ 27838118 (+)
dnah9l LOC103372266,LOC102781332,LOC102213424 coding downstream 572946 27960902 ~ 28025246 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding upstream 20335 27363578 ~ 27366561 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding upstream 125541 27258374 ~ 27261355 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding upstream 131547 27252543 ~ 27255349 (+)
G118303 NA non-coding upstream 141941 27244749 ~ 27244955 (+)
G118283 NA non-coding upstream 188437 27198183 ~ 27198459 (+)
G118488 NA non-coding downstream 222142 27610098 ~ 27610325 (+)
G118514 NA non-coding downstream 301056 27689012 ~ 27690687 (+)
G118537 NA non-coding downstream 556295 27944251 ~ 28042190 (+)
G118549 NA non-coding downstream 648505 28036461 ~ 28037330 (+)
G118564 NA non-coding downstream 731311 28119267 ~ 28119624 (+)
LOC120569025 NA other upstream 204176 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 209690 27147061 ~ 27177206 (+)
LOC120568791 LOC103357601 other upstream 448014 26878555 ~ 26938882 (+)
G118234 sugp1 other upstream 500866 26883559 ~ 26886030 (+)
LOC120567599 LOC101062208 other upstream 529502 26839178 ~ 26857394 (+)
gpr35b NA other downstream 6567 27394523 ~ 27399396 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other downstream 214044 27602000 ~ 27609718 (+)
LOC120568664 NA other downstream 316045 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 768845 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2575459 29963415 ~ 29969913 (+)

Expression


Co-expression Network