G118488


Basic Information

Item Value
gene id G118488
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27610098 ~ 27610325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159690
gcggaagtcaggttgatacacagccgacagccctattggacaactgttagacttcatattatggcaagaaccaatcagctaagtaaagagaaacgattagccatcattactttaacaaatgaaggtcagtcagtccggaaaattgcgaaaactttgaatgtgtccccaagtgcagtcgcaaaaaccatcaagcgctacaacaaaactggctcaaatgaggaccgcccc

Function

GO:

id name namespace
GO:0004576 oligosaccharyl transferase activity molecular_function
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity molecular_function

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU159690 True 228 lncRNA 0.44 1 27610098 27610325

Neighbor

gene id symbol gene type direction distance location
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding upstream 167969 27434113 ~ 27442129 (+)
cactin cactin coding upstream 281247 27318329 ~ 27328851 (+)
LOC120567742 LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336 coding upstream 318563 27286920 ~ 27291535 (+)
LOC120567815 LOC104964637 coding upstream 328768 27261660 ~ 27281330 (+)
LOC120567763 btbd2,LOC103376164,LOC107096948 coding upstream 358827 27246293 ~ 27251271 (+)
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding downstream 1750 27612075 ~ 27632981 (+)
LOC120567796 NA coding downstream 75839 27686164 ~ 27688056 (+)
epha4b LOC103372263 coding downstream 128667 27738992 ~ 27838118 (+)
dnah9l LOC103372266,LOC102781332,LOC102213424 coding downstream 350577 27960902 ~ 28025246 (+)
LOC120567659 NA coding downstream 476492 28086817 ~ 28104458 (+)
G118420 NA non-coding upstream 222142 27386896 ~ 27387956 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding upstream 243537 27363578 ~ 27366561 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding upstream 348743 27258374 ~ 27261355 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding upstream 354749 27252543 ~ 27255349 (+)
G118303 NA non-coding upstream 365143 27244749 ~ 27244955 (+)
G118514 NA non-coding downstream 78687 27689012 ~ 27690687 (+)
G118537 NA non-coding downstream 333926 27944251 ~ 28042190 (+)
G118549 NA non-coding downstream 426136 28036461 ~ 28037330 (+)
G118564 NA non-coding downstream 508942 28119267 ~ 28119624 (+)
G118575 LOC103372819,LOC108239494 non-coding downstream 566162 28176487 ~ 28178341 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 380 27602000 ~ 27609718 (+)
gpr35b NA other upstream 210702 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 427378 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 432892 27147061 ~ 27177206 (+)
LOC120568791 LOC103357601 other upstream 671216 26878555 ~ 26938882 (+)
LOC120568664 NA other downstream 93676 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 546476 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2353090 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 2958770 30569095 ~ 30677352 (+)
G119114 NA other downstream 3554901 31165226 ~ 31203586 (+)

Expression


Co-expression Network