G118514


Basic Information

Item Value
gene id G118514
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27689012 ~ 27690687 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159727
CTGCTCTGCATGGTGTATGTTCTGTTACATATGTGCCTGAGCTGTCCTGCCCCCCAACCTCATGCAAATGCATGACTTGACTGACAGGGAGGCGGTCTTTTGTTGTGCTATTTCAGATCAGCACCGAGAGGGGTTGGTGCTCCAGTCAGACAAGGTGACTCCGTTGATGACACGCTCCTCTCATCCAAACTGTCATGAAGTCATTTCACATCCCCACTAGATGGCACAATAGATCTGCAAAAACTGAGCCTCTGCCAGCTACATCATGAGGTCTGGATGGCCATTTGATGAGCACAGCTGCCTTTGATTTCCAATATCAACCAGTAACGAAAACACACGTGGATAGAGCACAAGAGCATTTATTTtgtagcaaacaacagacatcTCTCAGATGTATTGCACTGTTATGCATATCATgctgtttcttttatttctgttaATCTTAATGATAGCTGAAGAAATAACACAGATGGAGGAAAGCAATAAGACAATGGAAAGACAAATAAATAGCGCCTAgcaataaatattaaatattatagAATAACATTAGAaagcattttaaatatttttaaattaattcaaGACAATTTTCTGGAGATATGTGATAATGGTGAGCAGTGCTTTCTAAGTGCTGGAGGTTGTAGGGGCAGCAGCAGTGTTGTTCTTTCTGCTGGAGGTTGTAGGGGCAGCAGTAGTGTTGTTCTTTCCTCTGCGGGCCTGCCTGTAAAACAGACCAAACAAGGGATAGCAGTTAAAATACCAGTTTGTGCTGCCCCAGAGCACTTGATATATCATATCTGAAGCAACCAACTAGCAGATATGGTGAATACCCAAAGACTGACTGAGATAACAAAGGACTACTCACTCTAACTCCTTGATCTTGTCAAACACCCAGTCCTGTTTCCAGTGGCTGCAGACTTCTCCCTCTGCGGTCTTAAATCTGGGAGGGATCACAAAGATCAATCACAATCCCTCTACAAATTTTAATGAAGAACTTTCGATTTTTCAACAGTTTTTGTTCactctttctttaaaaaaagaaattaggaAGTGATTCTTACATGACGGCGCGGACACATGGGAGGTCCTTCCTCTGGATCCTGTAGCCCAAGATGGGAGCGGTGACTTCTGCGACACCGACCTGAGTGCAGCACTCGATTATCTTCTTTTGGCCGCTGCTGTCATTGCCAGAACCCCAGCGAGGAGAGCCAGGCATGCCAGTCTTCTGATGCACAGCTGCATGGTTACTGCGTGAGATGTTCCAGAGGTTCTTTGCAGAAGCTGAATGTTTGATCTGGCTGAGGGAGGCGATTGATGTCCTCGGACCAGACCTCGAGGTTTTATACCGTGAAAAGAGGAACCAGGGCAAAGTAGCCGGATAAACTGTCTCTTCGGGCTTTCTACATATTGTGTGCG

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU159727 True 1416 lncRNA 0.44 3 27689012 27690687

Neighbor

gene id symbol gene type direction distance location
LOC120567796 NA coding upstream 956 27686164 ~ 27688056 (+)
LOC120568637 LOC103375584,LOC102291402,LOC100711435,LOC101486656,LOC102207732 coding upstream 56031 27612075 ~ 27632981 (+)
abhd17aa LOC104964210,LOC102219722,LOC102776363,LOC106951423,LOC103364376,LOC103151229,LOC103479270 coding upstream 246883 27434113 ~ 27442129 (+)
cactin cactin coding upstream 360161 27318329 ~ 27328851 (+)
LOC120567742 LOC104929666,LOC103364388,LOC102238372,LOC107384139,LOC106526336 coding upstream 397477 27286920 ~ 27291535 (+)
epha4b LOC103372263 coding downstream 48305 27738992 ~ 27838118 (+)
dnah9l LOC103372266,LOC102781332,LOC102213424 coding downstream 270215 27960902 ~ 28025246 (+)
LOC120567659 NA coding downstream 396130 28086817 ~ 28104458 (+)
pcyt1aa pcyt1a coding downstream 502228 28192915 ~ 28203729 (+)
clstn2a LOC102305044,LOC102198559,LOC100692037,LOC101467236,LOC102787137 coding downstream 582980 28273667 ~ 28473545 (+)
G118488 NA non-coding upstream 78687 27610098 ~ 27610325 (+)
G118420 NA non-coding upstream 301056 27386896 ~ 27387956 (+)
G118409 LOC103364379,LOC104929640,LOC100699176 non-coding upstream 322451 27363578 ~ 27366561 (+)
G118306 eef2,LOC108239462,LOC107552698,LOC107384141 non-coding upstream 427657 27258374 ~ 27261355 (+)
G118280 LOC108239462,LOC106526414,LOC106536761,LOC107384141,LOC107096963,LOC104964635,LOC106908645,LOC106951439,LOC103151243,LOC102221193,LOC103479455 non-coding upstream 433663 27252543 ~ 27255349 (+)
G118537 NA non-coding downstream 253564 27944251 ~ 28042190 (+)
G118549 NA non-coding downstream 345774 28036461 ~ 28037330 (+)
G118564 NA non-coding downstream 428580 28119267 ~ 28119624 (+)
G118575 LOC103372819,LOC108239494 non-coding downstream 485800 28176487 ~ 28178341 (+)
G118554 ap2m1,LOC105021137,LOC105899178,LOC107727484,LOC108267679,LOC107559346 non-coding downstream 519028 28209715 ~ 28214108 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 79294 27602000 ~ 27609718 (+)
gpr35b NA other upstream 289616 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 506292 27179097 ~ 27182720 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other upstream 511806 27147061 ~ 27177206 (+)
G118234 sugp1 other upstream 802982 26883559 ~ 26886030 (+)
LOC120568664 NA other downstream 13314 27704001 ~ 27705211 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other downstream 466114 28156801 ~ 28169970 (+)
LOC120567689 NA other downstream 2272728 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 2878408 30569095 ~ 30677352 (+)
G119114 NA other downstream 3474539 31165226 ~ 31203586 (+)

Expression


Co-expression Network