G118613


Basic Information

Item Value
gene id G118613
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28144428 ~ 28145034 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159885
CTAATAAATGGAAGTTTGAGCATGTAGCaagcatagactgttaatatgaaTTTTACAGTCAATGGTAGCAAGCACATCCTTCACATTCTCCCTCATGTCACTCCTGATGGGCAGCGGCACAACACACCACATCAGACCATCTCAAATTTGTGTGTGGCCCATAACGATAAGGGGAAAGCACTATAGATTCATGTATTACTGTAATAATTCATCACTGTTGAATGTCTACCCCCAGGGCCTAAGGCCCTGCCAGACGAGGGTTTTTCATAGTATCACCAGGTGTAGTTGACAGATTGATTCAGCTCTTTTCCAGTTTATGTGCTGAATAATAAAATCTGCACAAACTAGAGGGCAAAAATCCTAGACTGGgttaaacccagcccgatctgccggtgatttgatttcaccctgttcaatcttaaaagactgagcttggtctggtgatagccagactacaaAAATGCTGCATTGGGGTTGTACATTCCACTCACACAGCATCCCTTTGTTCTAGTTTTCCAATTCCTCTCAACTATCCATCTCGTTCGTCTACAGGTGGGTTTAATAAAGAAAAGAACGTGATTAAATATCTCACAAGGTTCATTCTCTC

Function

GO:

id name namespace
GO:0009069 serine family amino acid metabolic process biological_process

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU159885 True 607 lncRNA 0.42 1 28144428 28145034

Neighbor

gene id symbol gene type direction distance location
LOC120567660 NA coding downstream 10224 28104455 ~ 28134204 (-)
LOC120567656 LOC103372825,LOC100689894,LOC106526166,LOC108239540 coding downstream 66913 28042117 ~ 28077515 (-)
LOC120567657 LOC103372265,LOC100712512,LOC102781040,LOC102296248,LOC101472093,LOC102204333 coding downstream 102469 28028019 ~ 28041959 (-)
LOC120568371 NA coding downstream 424276 27717398 ~ 27720152 (-)
LOC120568372 NA coding downstream 430009 27713338 ~ 27714419 (-)
LOC120568081 LOC103372819,LOC102300262,LOC102201271,LOC101469517,LOC100690967 coding upstream 24926 28169960 ~ 28185339 (-)
LOC120568084 NA coding upstream 40925 28185959 ~ 28188829 (-)
LOC120568085 ap2m1,ap2m1a,LOC108267679 coding upstream 61684 28206718 ~ 28221404 (-)
LOC120568087 dvl3,LOC103366747,LOC101468147,LOC100700965 coding upstream 76846 28221880 ~ 28238517 (-)
copb2 copb2,LOC101157089 coding upstream 94456 28239490 ~ 28249087 (-)
G118608 LOC103372824 non-coding downstream 44618 28095023 ~ 28099810 (-)
G118504 NA non-coding downstream 479716 27627886 ~ 27664712 (-)
G118482 NA non-coding downstream 534734 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding downstream 539187 27602401 ~ 27605241 (-)
G118401 NA non-coding downstream 849128 27294283 ~ 27295300 (-)
G118632 pcyt1a,LOC104957745,LOC107091881,LOC103040438 non-coding upstream 55103 28200137 ~ 28200551 (-)
G118636 NA non-coding upstream 60677 28205711 ~ 28206241 (-)
G118668 NA non-coding upstream 325933 28470967 ~ 28473620 (-)
G118671 NA non-coding upstream 336605 28481639 ~ 28481897 (-)
G118678 NA non-coding upstream 511627 28656661 ~ 28657022 (-)
G118524 NA other downstream 425669 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 469068 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 1319858 26819838 ~ 26824570 (-)
G118175 NA other downstream 1478476 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 1824833 26315770 ~ 26319595 (-)
metap1d metap1d,LOC102783095 other upstream 1237 28146271 ~ 28152770 (-)
G118764 NA other upstream 841057 28986091 ~ 28986319 (-)
G118856 NA other upstream 1275345 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 1491069 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 2295855 30440889 ~ 30477185 (-)

Expression


Co-expression Network