G118678


Basic Information

Item Value
gene id G118678
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28656661 ~ 28657022 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU159970
ctcgagccatctatggcgccattttgttgctacctggccaagTTGGATACTGTGATTATCATGGGCCCAAAATTGGATACCATCTTGGAGAGACAGTCAGCTCTGGacaagctggacaacatctTGGGGAAACTCACGGTTTTGGCAAGGAAATTTGATCGTTACGGAGACCAGAGGGGACATTTTAGAGAAGTCGGGAGTGACTAACTGCCGGCTCCTAGccccaagacaaaacaaattccaaccttATCTTTTCGGCTCCTGAACCAGCGCTGGCCTTGGCCAAGGCCGGTGTTGAATACTCACTCCCCCTGGAGCACTACAGCGAGGCACACTCTTCATTTCCCCACCCGACTCCCACT

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU159970 True 362 lncRNA 0.52 1 28656661 28657022

Neighbor

gene id symbol gene type direction distance location
LOC120567677 NA coding downstream 9128 28637052 ~ 28647533 (-)
LOC120568207 LOC103366836,LOC108239510,LOC100692307,LOC102787733 coding downstream 43268 28593338 ~ 28613393 (-)
LOC120568715 LOC104944837,LOC103366837,LOC102237248,LOC102197332 coding downstream 66517 28498947 ~ 28590144 (-)
LOC120567676 nmnat3,LOC102233219 coding downstream 386005 28250633 ~ 28270656 (-)
rbp1.1 rbp1,LOC107990174,LOC104933927 coding downstream 396758 28255245 ~ 28259903 (-)
LOC120567913 NA coding upstream 2810 28659832 ~ 28661149 (-)
LOC120568118 LOC104947936,LOC107372586,LOC107373506 coding upstream 217853 28874875 ~ 28876602 (-)
LOC120568834 NA coding upstream 443988 29101010 ~ 29103793 (-)
LOC120568712 NA coding upstream 630254 29287276 ~ 29292640 (-)
si:ch211-153l6.6 LOC102313061,LOC101473329 coding upstream 896437 29553459 ~ 29586063 (-)
G118671 NA non-coding downstream 174764 28481639 ~ 28481897 (-)
G118668 NA non-coding downstream 183041 28470967 ~ 28473620 (-)
G118636 NA non-coding downstream 450420 28205711 ~ 28206241 (-)
G118632 pcyt1a,LOC104957745,LOC107091881,LOC103040438 non-coding downstream 456110 28200137 ~ 28200551 (-)
G118613 NA non-coding downstream 511627 28144428 ~ 28145034 (-)
LOC120568122 NA non-coding upstream 41072 28698094 ~ 28699197 (-)
G118698 NA non-coding upstream 85938 28742960 ~ 28743235 (-)
G118700 NA non-coding upstream 98565 28755587 ~ 28755883 (-)
LOC120568120 NA non-coding upstream 139056 28796078 ~ 28802749 (-)
G118732 NA non-coding upstream 235129 28892151 ~ 28893217 (-)
metap1d metap1d,LOC102783095 other downstream 503891 28146271 ~ 28152770 (-)
G118524 NA other downstream 937902 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 981301 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 1832091 26819838 ~ 26824570 (-)
G118175 NA other downstream 1990709 26661621 ~ 26665952 (-)
G118764 NA other upstream 329069 28986091 ~ 28986319 (-)
G118856 NA other upstream 763357 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 979081 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 1783867 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 2207224 30864246 ~ 30876111 (-)

Expression


Co-expression Network