G118884


Basic Information

Item Value
gene id G118884
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 29550574 ~ 29550809 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160212
aaacatttttttttaattcgaaTATGTAATGGTCAAATGCAGCTGTttttaatatgtactacactactcaggcttatgcattgttaATGCCACTATCAGCATGTGGTagttgttacacgttctgtcccCTAGAGGGACTTCTAACATTGAAGGGGACCTACATCATGGCGCATTGCACGCAACTTTGTTAacattcattttccaccacgagcatgcagcgacaaacacaaatcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160212 True 236 lncRNA 0.39 1 29550574 29550809

Neighbor

gene id symbol gene type direction distance location
LOC120568652 NA coding upstream 4525 29516140 ~ 29546049 (+)
si:ch73-257c13.2 NA coding upstream 231756 29316220 ~ 29318818 (+)
LOC120567683 NA coding upstream 295898 29253394 ~ 29254676 (+)
LOC120567682 NA coding upstream 314586 29234683 ~ 29235988 (+)
LOC120567681 LOC107104891 coding upstream 354212 29195088 ~ 29196362 (+)
LOC120567686 NA coding downstream 140148 29690957 ~ 29692353 (+)
LOC120567688 NA coding downstream 184711 29735520 ~ 29743592 (+)
LOC120568908 NA coding downstream 481101 30031910 ~ 30033534 (+)
LOC120569089 NA coding downstream 494085 30044894 ~ 30046190 (+)
LOC120569133 NA coding downstream 505006 30055815 ~ 30057109 (+)
G118880 NA non-coding upstream 25085 29523113 ~ 29525489 (+)
G118881 NA non-coding upstream 29952 29518750 ~ 29520622 (+)
G118859 NA non-coding upstream 83971 29466260 ~ 29466603 (+)
G118839 NA non-coding upstream 204871 29345502 ~ 29345703 (+)
G118802 NA non-coding upstream 329823 29220360 ~ 29220751 (+)
G118888 NA non-coding downstream 24706 29575515 ~ 29576313 (+)
LOC120567627 NA non-coding downstream 36836 29587645 ~ 29588546 (+)
LOC120567652 NA non-coding downstream 139651 29690460 ~ 29690894 (+)
G118943 NA non-coding downstream 357024 29907833 ~ 29908479 (+)
G118944 NA non-coding downstream 362641 29913450 ~ 29913658 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 1380604 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 1845363 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 1940856 27602000 ~ 27609718 (+)
gpr35b NA other upstream 2151178 27394523 ~ 27399396 (+)
LOC120569025 NA other upstream 2367854 27179097 ~ 27182720 (+)
LOC120567689 NA other downstream 412606 29963415 ~ 29969913 (+)
LOC120568595 sdr16c5 other downstream 1018286 30569095 ~ 30677352 (+)
G119114 NA other downstream 1614417 31165226 ~ 31203586 (+)
G119123 NA other downstream 1648151 31198960 ~ 31235565 (+)
G119257 NA other downstream 1909055 31459864 ~ 31460908 (+)

Expression


Co-expression Network