G119030


Basic Information

Item Value
gene id G119030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30452127 ~ 30462896 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160393
ATAAGAAAAGAGTTGATTGATCTTGGTGAATGTGGTCATTGAATGCGTTGTGTGTGAaagcactgaaaacacacagttttGGTCCACATAGACTTCTGTTTCACAGACTGTGAAGAGTTCTGACAATGTGACTTCGGTTTGGACCGATACATGTTAGCAACTGAAAACAACTGTAAATGGCTCCTTTCATATGGCTGGGACATTTTAGGACTCAATAATCTTCAATTAATAATCTTCCACTATCAACCCACTACTGTTTGAATGGATATTGTTTGATGTTTTGCTATAGTTTAACTGATTTGTTATTGACTGttggtttggtgtgtgtgttcgtgctcAATATCATTAAAAATTACCCTCTCCCTTAATTGATCtttgggtgtctgtgtgtgtctatatttgtgtgtgtctttctttgtgtgtgtgtttgtgcatgtgtgtgtctttctgtgtgtgtctgtctttgtgtgtgtgtgtgtgtttgttggtccatctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtctttctgtgtgtgtctgtctttgtgtgtgtgtgtgtgtgtgtttgtgcgtgtgtgtgtgtctttctgtgtgtgtctgtcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtccatctttgtgtgtgtgtgtgtgtgtgtgtgtgagaacctTTTAGTTTGTTCTCCAAGTATTCCAGTATGATCCGGAC
>TU160395
gtatgtgtgtctgtgtctatctttgtgtgtgtgtgtatatgtatgtgtgtgtgtgtgtgtatgtgtgtgtgtttgtgcatgtgtgtgtctttctgtgtgtgtctgtctttgtgtgtgtgtgtgtgtttgttggtccatctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtctttctgtgtgtgtctgtctttgtgtgtgtgtgtgtgtgtgtttgtgcgtgtgtgtgtgtctttctgtgtgtgtctgtctttgtgtgtgtgtgtgtgtgtgtgtttgtgtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160393 True 744 lncRNA 0.40 3 30452127 30453137
TU160395 False 307 lncRNA 0.44 3 30452727 30462896

Neighbor

gene id symbol gene type direction distance location
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 233405 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 395018 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 405937 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 418593 30031910 ~ 30033534 (+)
LOC120567688 NA coding upstream 708535 29735520 ~ 29743592 (+)
LOC120567691 LOC107740693 coding downstream 544826 31007722 ~ 31011324 (+)
LOC120568980 NA coding downstream 968910 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 1397834 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 1466249 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 1479307 31942203 ~ 32016352 (+)
G118994 NA non-coding upstream 188568 30263259 ~ 30263559 (+)
G118965 NA non-coding upstream 373917 30077818 ~ 30078210 (+)
G118964 NA non-coding upstream 374415 30077399 ~ 30077712 (+)
G118951 NA non-coding upstream 484510 29967378 ~ 29967617 (+)
G118944 NA non-coding upstream 538469 29913450 ~ 29913658 (+)
G119064 NA non-coding downstream 219185 30682081 ~ 30682321 (+)
G119066 NA non-coding downstream 230092 30692988 ~ 30693284 (+)
G119071 NA non-coding downstream 332346 30795242 ~ 30795503 (+)
G119076 NA non-coding downstream 388068 30850964 ~ 30895939 (+)
LOC120568932 NA non-coding downstream 461870 30924766 ~ 30926283 (+)
LOC120567689 NA other upstream 482214 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 2282157 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 2746916 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 2842409 27602000 ~ 27609718 (+)
gpr35b NA other upstream 3052731 27394523 ~ 27399396 (+)
LOC120568595 sdr16c5 other downstream 106199 30569095 ~ 30677352 (+)
G119114 NA other downstream 702330 31165226 ~ 31203586 (+)
G119123 NA other downstream 736064 31198960 ~ 31235565 (+)
G119257 NA other downstream 996968 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 1402859 31865755 ~ 31869495 (+)

Expression


Co-expression Network