G119114


Basic Information

Item Value
gene id G119114
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31165226 ~ 31203586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160500
atacaccacattcacacacagacagacagacacacacacacacacacacacacacacacacacacacacacacacacaaagacacaaagagacacagacacacaaacacacacacagacagacacacagacacacacacgcaagcacacacagatacacacacacacgcaagcacacacagacagacacacacctacacacacacacacacgcacacacaaagacacacacagagacacagacacacaaacacacacagacacacaaacacgcaagcacacacagacacacacacacatgcagacatacacagacacacatacacaaagcatgtttataaacacgtcacagacacttagtagccatgacaaccctttcacagacagtcaaactttaagcctttttagtcaattttagtcaaagttgctctctttctaattttttctatctttcctctcttttttctctcctctctttcctctttcctctctctctcctctttattctttctctcctctctttattctctttctctcctctctcttctcttctctcctgctcttctttcttctctctttctctccttgtctctttcctctctttcttcttgtttagCCC
>TU160502
agagctttgttggaggctttgaccactggcagcagcctcagcaGAGCCttctctgaagcagagtatttcttcaggtcaaacacgtccagatctttttctgatgacagtaagatgaagaccagagctgaccactgagcaggagacagtttatctgtggagagacttcctgaactcagggactgttggatatcctccactagagaacgatcattcagttcattgagacagtggaacagattgatgcttctctctgcagacagatcCTCACTGATCTTCGTCTTGATGTACTTGACTGTTTCCTGATAGGTCTCTGAGCTGCTTCCTGTCTCTGTCATCAGGCCTCGTAGgagattctgattggtctgcagtgaaagacccaggaggaagcggaggaacaagtccaggtgtccatttggactctgtaaggccttgtccacagcactctgaTGGAAACATTTTACTTCAGGTTTGACTCTGAAGACGTTAGTCAGCCAGGACCACCACGATGTTGTTTGTTCTTCTGAAagcaggttgactccagagttgatgaatgtcagatcgacatgaagagcagccagaaactcctgaacactcagatggacaaagcagaacaccttgtcctggtacagtcctctctcctctttaaagatctgtgtgaacactcctgagtacactgaggctgatctgatatcgatgccacactccgtcaggtctgattcatagaagatcaggttgcctttctgcagctgctcaaaagccagttttcccagagatGTAATCATTTTCTTCGTCTCTTTATTCCAGGATGAATCGGTCCCAACTCCTCCACTGTATTTGATGTTCTTCTGTTTGGACTGAACCACGAGaaagtggatgtacatctcagtcagggtcttgggcagctctcctccttctctggtcttcaacacgtcctccagaactgtagcagtgatccagcagaagactgggatgtggcacatgatgtggaggcttcgtgatgtcttgatgtgggagatgattctgctggcctgctcctcatctgTGTATCTCTtactgaagtactcctccttttGTAGGTCAGTGAATCCTCTGACCTCTGTTACCACGTGAACACACTCAgcagggatctgattggctgctgcaggccttgtggttatccagaggcgagcagagggaagcattTCCCCCCTGATGAGATTTGTCAGCAGCGCACCtactgaggtggactctgtaacatcagtcaggatctcagtgttgtggaagtccagaggaagtcgacactcatccagaccgtcaaagatgaacacaaccgggaactcttcaaacctgcagattcctgcttctttggttcCACTGAAGAAGTGatcaacaagttccaccaagctgtactttttctctttcagcacattcagctctctgaaagtgaatggaaatatgaactggatgtcctggttggctttgtcttcagcccagtccagagtgaacttctgtgttaagactgttttcccgatgccagccactccctttgtcatcactgttctgattggttcatctcttccagttggggctttaaagatgtcttctcgtctgattgttgtttctggtctgtctggttttcTGGACGTtatttcaatctgtctgacctcatgttctttattgggggaatgctgttctacagcattccacctattgttattcggttttattgggggaatgctgttttacagcattccacctattgttgtttctgtcggccattttctttatttttctgcttattccctcttccgtacgttttttggctctctgtaacttctgcatactttcacctatttaaaccattcaacttttcaaatgttcagctctttcagctaatgatgggacttcttcaactttttttctactatttatactttttcaaattttaagctttttaacacttttttttaacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160500 False 618 lncRNA 0.43 3 31165226 31203586
TU160502 True 1954 TUCP 0.45 2 31171217 31196233

Neighbor

gene id symbol gene type direction distance location
LOC120567691 LOC107740693 coding upstream 153902 31007722 ~ 31011324 (+)
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 946504 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 1108117 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 1119036 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 1131692 30031910 ~ 30033534 (+)
LOC120568980 NA coding downstream 228220 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 657144 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 725559 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 738617 31942203 ~ 32016352 (+)
mpz mpz,LOC102776110 coding downstream 828066 32031652 ~ 32051435 (+)
LOC120568931 NA non-coding upstream 79688 31084268 ~ 31085538 (+)
LOC120568932 NA non-coding upstream 238943 30924766 ~ 30926283 (+)
G119076 NA non-coding upstream 269287 30850964 ~ 30895939 (+)
G119071 NA non-coding upstream 369723 30795242 ~ 30795503 (+)
G119066 NA non-coding upstream 471942 30692988 ~ 30693284 (+)
LOC120568930 NA non-coding downstream 48200 31251786 ~ 31253673 (+)
G119219 NA non-coding downstream 150644 31354230 ~ 31354583 (+)
G119220 NA non-coding downstream 151111 31354697 ~ 31354972 (+)
G119221 NA non-coding downstream 152021 31355607 ~ 31355871 (+)
G119227 NA non-coding downstream 157849 31361435 ~ 31361749 (+)
LOC120568595 sdr16c5 other upstream 487874 30569095 ~ 30677352 (+)
LOC120567689 NA other upstream 1195313 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 2995256 28156801 ~ 28169970 (+)
LOC120568664 NA other upstream 3460015 27704001 ~ 27705211 (+)
LOC120568838 LOC103364371,LOC102207447,LOC101475014 other upstream 3555508 27602000 ~ 27609718 (+)
G119257 NA other downstream 256278 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 662169 31865755 ~ 31869495 (+)
pip4p1a tmem55b,LOC101161334 other downstream 685322 31888908 ~ 31914704 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other downstream 863977 32067563 ~ 32071312 (+)
cadm3 cadm3 other downstream 924872 32128458 ~ 32226483 (+)

Expression


Co-expression Network