LOC120568929


Basic Information

Item Value
gene id LOC120568929
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 30864246 ~ 30876111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160542
taaatttttttaaataaatgattatttccATAATAATTAACTATGGAATTTGTAAATACAAGATCATGAAGAACACTGAAGacttttaaaattttattttaataagcaTGTTTGCGAGATAAATCTCATGGACATGAAAACTCCCTCAATTATATATTGACCCTACCATAAATGAACTGACCAATATTCATATCTACTTTCTTTTTAGATGAGTCAACACCACACAGGAAACCAGCCGGTCGCCCAGAGCTGGATGGGTGTATTCTAACACAAGCTCGGCCTGCCACTTCATCTTGGGACCCAGTTGAAGcaacttttcCTGACAAGCCCGGAGGTTGGACCGGAGGTACTGCCATGCGTCGCATGCTACGGCGAGTCGCAACCAATGATGTTCTAAAACTGTATATCCTGCGGGgcagaaagggaaagaaggccttccaggacctgactatctgcagggttataacagTGGTCTCCCAGAAAAACTTCCCCGtgctgactgcagcagacgCGGAGGACTTGATTGGAAGTTTGCCCCACACAGACGgtcagctgagaaggactgagccttcaaaaccatggagctctatttattttttgtttttgcggaagcaagagctgttggccatcttctacactgctgccatcctcctgcctcctcccctctggcacGCGATATagatccctgcacacaaaaacaaccagacacaagaacagcttctttccctctgccatccctctcctgaactgctgataagtgggctcatccccactttggccattcacctacacattacatactttatcattccaatatgcattttgcacaatacatttgcactattactttgcactctacat
>TU160545
TTGCGTTTGATACGATACACCAACTGACAAAGAAAGATCTTATTTGCTTCGCCAAACGATCTCACGAAAAAatgacTCCAGTCCACAAGCAAGAAAGCGTTCCAGGACGGAGCGTGTGTGTGGAAGCCCTGTCTGTAAGTTaacatttatacatgcatttaagaaACCAGAGTCATATTCCTACCATGGAACTACTGACCCTCAGCCTGCTGCTTATCATGTGACTGTTCTGATGGGTTTGTCTCTTCCTGCCTTTTTTCAGGTCAGTAGACATCACTGCCACCACCACCTgcatcgtatttccttggagaacgtttgcaccaagaccctggttgcgctgtcgccgtggtcctgctgcactccctgctgagctcagcgatgccctgcaatgtcatgcgcgtcctgctgaaccctgcagcttcccgctacatccagtcactgttccattattaatgtgactactatcgccactgttcatcacacccccaaccggctcgtcagacaccgcctaccaagagcctggATGAGTCAACACCACACAGGAAACCAGCCGGTCGCCCAGAGCTGGATGGGTGTATTCTAACACAAGCTCGGCCTGCCACTTCATCTTGGGACCCAGTTGAAGcaacttttcCTGACAAGCCCGGAGGTTGGACCGGAGGTACTGCCATGCGTCGCATGCTACGGCGAGTCGCAACCAATGATGTTCTAAAACTGTATATCCTGCGGGgcagaaagggaaagaaggccttccaggacctgactatctgcagggttataacagTGGTCTCCCAGAAAAACTTCCCCGtgctgactgcagcagacgCGGAGGACTTGATTGGAAGTTTGCCCCACACAGACGgtcagctgagaaggactgagccttcaaaaccatggagctctatttattttttgtttttgcggaagcaagagctgttggccatcttctacactgctgccatcctcctgcctcctcccctctggcacGCGATATagatccctgcacacaaaaacaaccagacacaagaacagcttctttccctctgccatccctctcctgaactgctgataagtgggctcatccccactttggccattcacctacacattacatactttatcattccaatatgcattttgcacaatacatttgcactattactttgcactctacat
>XR_005640806.1
gtgaccGATTCAAGTTCTGTCCTCCTGACGTTTGCGTTTGATACGATACACCAACTGACAAAGAAAGATCTTATTTGCTTCGCCAAACGATCTCACGAAAAAatgacTCCAGTCCACAAGCAAGAAAGCGTTCCAGGACGGAGCGTGTGTGTGGAAGCCCTGTCTGTCAGTAGACATCACTGCCACCACCACCTgcatATGAGTCAACACCACACAGGAAACCAGCCGGTCGCCCAGAGCTGGATGGGTGTATTCTAACACAAGCTCGGCCTGCCACTTCATCTTGGGACCCAGTTGAAGcaacttttcCTGACAAGCCCGGAGGTTGGACCGGAGGTACTGCCATGCGTCGCATGCTACGGCGAGTCGCAACCAATGATGTTCTAAAACTGTATATCCTGCGGGgcagaaagggaaagaaggccttccaggacctgactatctgcagggttataacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160542 False 861 TUCP 0.44 4 30864246 30865494
TU160545 True 1176 TUCP 0.50 7 30864246 30876080
XR_005640806.1 False 459 lncRNA 0.51 5 30864907 30876111

Neighbor

gene id symbol gene type direction distance location
LOC120567647 LOC103362157 coding downstream 138166 30717405 ~ 30726080 (-)
LOC120568640 sdr16c5 coding downstream 339383 30482588 ~ 30524863 (-)
LOC120568974 LOC101172692,LOC101069094,LOC103362177,LOC106599276 coding downstream 425594 30319952 ~ 30438652 (-)
LOC120567690 NA coding downstream 889957 29970090 ~ 29974289 (-)
LOC120567685 NA coding downstream 1173911 29685050 ~ 29690335 (-)
LOC120568925 LOC103362158,LOC101062358,LOC101473907,LOC100706964 coding upstream 164173 31040284 ~ 31155725 (-)
LOC120568926 NA coding upstream 324430 31200541 ~ 31202192 (-)
LOC120568656 NA coding upstream 806089 31682200 ~ 31692546 (-)
LOC120568655 LOC107092454 coding upstream 820692 31696803 ~ 31710791 (-)
LOC120568044 LOC103370525 coding upstream 838176 31714287 ~ 31799338 (-)
G119073 NA non-coding downstream 68462 30794967 ~ 30795784 (-)
G119014 NA non-coding downstream 544408 30316096 ~ 30319838 (-)
G119012 NA non-coding downstream 588899 30274707 ~ 30275347 (-)
G118990 NA non-coding downstream 644144 30219713 ~ 30220102 (-)
LOC120568731 NA non-coding downstream 714617 30144044 ~ 30149629 (-)
G119171 NA non-coding upstream 301276 31177387 ~ 31197976 (-)
G119180 NA non-coding upstream 308476 31184587 ~ 31237816 (-)
G119184 NA non-coding upstream 308880 31184991 ~ 31244376 (-)
G119176 NA non-coding upstream 326431 31202542 ~ 31203107 (-)
G119173 NA non-coding upstream 350996 31227107 ~ 31235412 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other downstream 387061 30440889 ~ 30477185 (-)
LOC120567741 NA other downstream 1214454 29636103 ~ 29649792 (-)
G118856 NA other downstream 1443594 29420379 ~ 29420652 (-)
G118764 NA other downstream 1877927 28986091 ~ 28986319 (-)
metap1d metap1d,LOC102783095 other downstream 2711476 28146271 ~ 28152770 (-)
G119177 NA other upstream 250319 31126430 ~ 31174951 (-)
G119169 NA other upstream 293811 31169922 ~ 31171610 (-)
LOC120568745 NA other upstream 579488 31455599 ~ 31457157 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other upstream 593484 31469595 ~ 31575193 (-)
G119379 NA other upstream 1171366 32047477 ~ 32051439 (-)

Expression


Co-expression Network