G119228


Basic Information

Item Value
gene id G119228
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31361837 ~ 31362039 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160643
cgtgcatcaaacctctcgatattcaccaacGTGTGCCCCCCCTACGTAATGCTTCGGGTCCCGCATTGGCGCAGCTTCGCGGGTCATCGGGGGCGACTGGCGCAGCTCCCCGGGCCATCGCggacgactggcatcggaggcgaatggcatcggaggcgaatggcatcggaggcgaatggcatcggaggcgaatggcatcggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160643 True 203 lncRNA 0.65 1 31361837 31362039

Neighbor

gene id symbol gene type direction distance location
LOC120567691 LOC107740693 coding upstream 350513 31007722 ~ 31011324 (+)
LOC120568730 LOC101472437,LOC102310659,LOC102778004,LOC103360659,LOC106534850 coding upstream 1143115 30101634 ~ 30218722 (+)
LOC120569133 NA coding upstream 1304728 30055815 ~ 30057109 (+)
LOC120569089 NA coding upstream 1315647 30044894 ~ 30046190 (+)
LOC120568908 NA coding upstream 1328303 30031910 ~ 30033534 (+)
LOC120568980 NA coding downstream 69767 31431806 ~ 31453460 (+)
eif3f eif3f coding downstream 498691 31860730 ~ 31865235 (+)
LOC120568893 LOC100705068 coding downstream 567106 31929145 ~ 31939478 (+)
lig1 lig1,LOC102777267 coding downstream 580164 31942203 ~ 32016352 (+)
mpz mpz,LOC102776110 coding downstream 669613 32031652 ~ 32051435 (+)
G119227 NA non-coding upstream 88 31361435 ~ 31361749 (+)
G119221 NA non-coding upstream 5966 31355607 ~ 31355871 (+)
G119220 NA non-coding upstream 6865 31354697 ~ 31354972 (+)
G119219 NA non-coding upstream 7254 31354230 ~ 31354583 (+)
LOC120568930 NA non-coding upstream 108164 31251786 ~ 31253673 (+)
G119232 NA non-coding downstream 21900 31383939 ~ 31384235 (+)
G119244 NA non-coding downstream 45189 31407228 ~ 31407886 (+)
G119252 NA non-coding downstream 66338 31428377 ~ 31428580 (+)
G119253 NA non-coding downstream 66614 31428653 ~ 31428858 (+)
G119255 NA non-coding downstream 91749 31453788 ~ 31454417 (+)
G119123 NA other upstream 126272 31198960 ~ 31235565 (+)
G119114 NA other upstream 158251 31165226 ~ 31203586 (+)
LOC120568595 sdr16c5 other upstream 684485 30569095 ~ 30677352 (+)
LOC120567689 NA other upstream 1391924 29963415 ~ 29969913 (+)
LOC120568082 LOC101159534,LOC103372818,LOC101069325 other upstream 3191867 28156801 ~ 28169970 (+)
G119257 NA other downstream 97825 31459864 ~ 31460908 (+)
dnaaf6 pih1d3,LOC106903480,LOC103138000,LOC103138005,LOC103137996,LOC106960166 other downstream 503716 31865755 ~ 31869495 (+)
pip4p1a tmem55b,LOC101161334 other downstream 526869 31888908 ~ 31914704 (+)
LOC120567694 LOC103373937,LOC106569580,LOC100136182,LOC107383461,LOC106960171 other downstream 705524 32067563 ~ 32071312 (+)
cadm3 cadm3 other downstream 766419 32128458 ~ 32226483 (+)

Expression


Co-expression Network