G119259


Basic Information

Item Value
gene id G119259
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31454479 ~ 31454958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160676
gacaaatcgagtcttttaacgcttcggatgtaacgttattctcagtcaagtgacgtaaaaaaaaaatggcggtcagcggaatgctaacaagaggtgatggccagttagcaacaaaatggcgccatgatggctcgagttctgaagcgaagcttaccctcttgggtgatagcaacaaatacagcatggtcggaCCCAGCACatagctgcccgttctattcgcctTGGAAAAAtgaactggacaaagttacattcggggctagtaagtaagtaagtaaagtttatttatagagcgcttttcacagataaaaatcacaaagtgcttcacaaggtACAAccacattgaaatacattggatgaggataaaacatttaaaaagtcaaagaTAAATTAAGCCCAATCAACTAAAAGCTTGTTTAAATAACAGTGTCTTGAGTCGTCTTTTAAAAGAATCAACAGAATCAGCCACACGGAGGAGCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160676 True 480 lncRNA 0.40 1 31454479 31454958

Neighbor

gene id symbol gene type direction distance location
LOC120568926 NA coding downstream 252287 31200541 ~ 31202192 (-)
LOC120568925 LOC103362158,LOC101062358,LOC101473907,LOC100706964 coding downstream 298754 31040284 ~ 31155725 (-)
LOC120567647 LOC103362157 coding downstream 728399 30717405 ~ 30726080 (-)
LOC120568640 sdr16c5 coding downstream 929616 30482588 ~ 30524863 (-)
LOC120568974 LOC101172692,LOC101069094,LOC103362177,LOC106599276 coding downstream 1015827 30319952 ~ 30438652 (-)
LOC120568656 NA coding upstream 227242 31682200 ~ 31692546 (-)
LOC120568655 LOC107092454 coding upstream 241845 31696803 ~ 31710791 (-)
LOC120568044 LOC103370525 coding upstream 259329 31714287 ~ 31799338 (-)
LOC120569109 LOC104940918,LOC103370533 coding upstream 347546 31802504 ~ 31821424 (-)
kcnj9 LOC101477758 coding upstream 383424 31838382 ~ 31860078 (-)
G119249 NA non-coding downstream 37490 31416739 ~ 31416989 (-)
G119246 NA non-coding downstream 45302 31408921 ~ 31409177 (-)
G119245 NA non-coding downstream 46625 31407454 ~ 31407854 (-)
LOC120567738 LOC107395007 non-coding downstream 49131 31402303 ~ 31405348 (-)
G119236 NA non-coding downstream 67565 31386709 ~ 31386914 (-)
G119260 NA non-coding upstream 95 31455053 ~ 31455397 (-)
G119284 NA non-coding upstream 159058 31614016 ~ 31614324 (-)
LOC120567841 NA non-coding upstream 205657 31660615 ~ 31663824 (-)
G119347 NA non-coding upstream 394480 31849438 ~ 31915814 (-)
G119357 NA non-coding upstream 461696 31916654 ~ 31917970 (-)
G119177 NA other downstream 279528 31126430 ~ 31174951 (-)
G119169 NA other downstream 282869 31169922 ~ 31171610 (-)
LOC120568929 NA other downstream 578368 30864246 ~ 30876111 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other downstream 977294 30440889 ~ 30477185 (-)
LOC120567741 NA other downstream 1804687 29636103 ~ 29649792 (-)
LOC120568745 NA other upstream 641 31455599 ~ 31457157 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other upstream 14637 31469595 ~ 31575193 (-)
G119379 NA other upstream 592519 32047477 ~ 32051439 (-)
G119465 cadm3,LOC106600493 other upstream 761544 32216502 ~ 32226360 (-)
LOC120568568 NA other upstream 909503 32364461 ~ 32374518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036752 si:ch211-194e1.7 coding NC_007119.7 CM002892.2 49358744 ~ 49375608 (-)