G119347


Basic Information

Item Value
gene id G119347
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31849438 ~ 31915814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU160786
tttgtACATTATGTCTTTATTTGTGTGTAAACAAACTCTGAAAAGAGCATCAGCCAGGTTCTTGATTATTGGCATTAACATGATTGATTTCTTTTGCAGTCATGGATAAAACATGATCACTCCACtgctaaaaagaaaaaggtctTCCTTAAACAAGTCATATTAATTCTGTCCTTCAACcttatttcccccccccccccatcacagTCTTAAAAAGTAATGCTCTGACCATAACTTGAAACTGGCAGATCATTGTATTGATTTCAAAAAGGAAACACGTCCTTGGTACAGTCTTAAAAGAAAGTGAAATAATCTCACTCCATAACAGACTTTTCCACAATAAATATGATTTTAGGACTGGATAAATGACTTATTTGTGGCCTTTTTGCAGCGTATAGAACGGTACATATGAACGGTTTGCGACCTCAGTCTACGTGGTAGCTTCTTCTCATCTTACTTTGTGTATGCAGTGTTTCTTACTATTgtataaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgaaatGTGACTGGGTCATGTTTTGTTGGTGCGAGTAGGTTGTGTTTGTGGTAAAAGATTTGGACTTTATATCCAGAGGCTTATTAGGTTAGTAGTTCATCAAATCATTAAATATGTAACAGGTGAAGAGTTGCAAAAATAACCttcttaaaaacaacaaataaaaacgtCCACAGCGATCACAGCATTTAGTGTTAAGCTCGGAGCAACGTAATTCGCTTAGTCACTTCCATTGTACATAAACaacatatatatttacaatcaaaacagaaaaaatacataattcATAACAGAAGAAATGTTACCACATTCAGAACCACAGACAGAGAAGTCATGATTAAACTGAGTGAGAATGTAGTGTGTGTTTAGGTTACTGACCTATTCTGACTGGCATTAGGCTTTGTGTGGTAGGTAGAGCTTTCCTCTTTTACAGATATTCCACTGGCCTTAAGGTGGATGCTCAATCTGGAACCGACCAAAAAGAAGCTCAGACACAGCCTCAATCTTCAATGACAAAAGCTGGACATATTTTCACCATGAATGGTCCCAACTGCAATACACTGACTGAGTTTAGCGACATGGTGCTTACATACTGATTGCACTTTGTTATTTGAGCTCTGATGCATTTAGATATACATCCAAAGTTGCTATCAGGAGCTCTCAAAGCCTGAAGCACTGTATTTTTAAGGGCTCaccgttttgtttttgttttcacagaTTCAACTTGAGAGCAAAACATACAGAGAGGCCCTTAAAAGCCCTCTCCCAAGACAAATGTGTAGTGTGGTTTGCAAGCATTAAAGCATACAACCAACAACTGAAAGCTATTCCAAAAAACATCTCATACTTTCAGGGTTTTGTGGGTAAAAGGTGGCAAATATCGACTTTGTAACAGCAAATAGCTCTTCAGGTTTCATATTTTGGTGTGTTTTGGAAGGCCAAGCAGAACCGAGGTCATATAGATATGTTTAAAAGTAAGTTTAAAAGTAAACCTGTCTCttgaaaaagggagggaggaTTATGCCACATTTGGCTTTTAATGTCAATTGGAGATATGCGATTGAAGTGAGCATTTAGGTAtgacaggaaaataaaaataataaaaagatgaacGTTTGACAAAGTAAACCTGTTGGCTATAGTTGACAGAAAGGAAAGCTGTAGATACATGTGTGGTTACACTCTTTAGAGGACCAGAATGAGGACAACGTTATGGAGAAAATCGGTTTTCTGGTCTGTCTTTGAAAAGAGAGGCTGGGGTGCCTTCGACAAACTGGTTTGTGAGCCGTTGCAACTCTAAAAGAGCACCCTCCTTTTGTTGTGAGCCGGTTTGCATTTATGtggcttgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcagaggAAACAAGGTGCATTGGGAGCAGCAGTCCCTCAATTAAGGCTGTGCTCccagcgcagtttacatgccGAGCTCAGTGAGCCAGATGAGGAAATAACAGCCTCATTAGAACagccacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaatccTTCTACCACACAACCTTTTAAGGCTTTCAAGCTGCTTTGGATCAAAGTCAGTCCCAGGGGATAATTCAGCAGAAACACTGACGTACTGCTGAATTCAATCTTTCAGACACATTTCAACACCTACTTGATCTTTTGCTTCACAAAAAAGGGAACTGATGTCCCTCCAGCCACTCGTCTTCGACTGGCATCGATTTGTTAGCTTCATCTGACTTCATCGCTGCTTTCGCAAAATCATTTGTTTTtagcaatttaaaaaatgttaaatgttcaaataataCTAAACCTAACGTCAAATTAGGATTGAAGAGGGAGCGTTCCCCCCTGAACAAAAACAAGGGCAATATTCACATCTTAGACTTAGCTTTAAGCCCCCATCTTAGAAGTTGCGAGAGTGCAACCGATGTGCCACAGACTGAAGCCGAAATGTATAAACAGCGCAGGggggaaagagaagaagaaataatTGTTAGAATTGTTACAGTGTTAAAACGAACCCCACCCTTGCCACGAGATTAGAACAGATAAACAGTACATTAGGCTATACGTATCATCATAGTTACCGTTAGATATATAGCAGTCGCAGCCATCCAGTTTTAGAAACACATTTGACTAAAAGGGAggggacaggaggaggagaactTTCTCTTTCTGGGGTTGggtttaaataaatattctgTTTTATAGTgggtgtgtttttctttaaagcCATCTTCTCCTCCGGCCTGGCGGGTTGGGAAGAGGGAGCGGCAGGGTTGGAGGGgg
>TU160790
tttgtACATTATGTCTTTATTTGTGTGTAAACAAACTCTGAAAAGAGCATCAGCCAGGTTCTTGATTATTGGCATTAACATGATTGATTTCTTTTGCAGTCATGGATAAAACATGATCACTCCACtgctaaaaagaaaaaggtctTCCTTAAACAAGTCATATTAATTCTGTCCTTCAACcttatttcccccccccccccatcacagTCTTAAAAAGTAATGCTCTGACCATAACTTGAAACTGGCAGATCATTGTATTGATTTCAAAAAGGAAACACGTCCTTGGTACAGTCTTAAAAGAAAGTGAAATAATCTCACTCCATAACAGACTTTTCCACAATAAATATGATTTTAGGACTGGATAAATGACTTATTTGTGGCCTTTTTGCAGCGTATAGAACGGTACATATGAACGGTTTGCGACCTCAGTCTACGTGGTAGCTTCTTCTCATCTTACTTTGTGTATGCAGTGTTTCTTACTATTgtataaggttgtgtgtgtgtgtgtgtgcgaaatGTGACTGGGTCATGTTTTGTTGGTGCGAGTAGGTTGTGTTTGTGGTAAAAGATTTGGACTTTATATCCAGAGGCTTATTAGGTTAGTAGTTCATCAAATCATTAAATATGTAACAGGTGAAGAGTTGCAAAAATAACCttcttaaaaacaacaaataaaaacgtCCACAGCGATCACAGCATTTAGTGTTAAGCTCGGAGCAACGTAATTCGCTTAGTCACTTCCATTGTACATAAACaacatatatatttacaatcaaaacagaaaaaatacataattcATAACAGAAGAAATGTTACCACATTCAGAACCACAGACAGAGAAGTCATGATTAAACTGAGTGAGAATGTAGTGTGTGTTTAGGTTACTGACCTATTCTGACTGGCATTAGGCTTTGTGTGGTAGGTAGAGCTTTCCTCTTTTACAGATATTCCACTGGCCTTAAGGTGGATGCTCAATCTGGAACCGACCAAAAAGAAGCTCAGACACAGCCTCAATCTTCAATGACAAAAGCTGGACATATTTTCACCATGAATGGTCCCAACTGCAATACACTGACTGAGTTTAGCGACATGGTGCTTACATACTGATTGCACTTTGTTATTTGAGCTCTGATGCATTTAGATATACATCCAAAGTTGCTATCAGGAGCTCTCAAAGCCTGAAGCACTGTATTTTTAAGGGCTCaccgttttgtttttgttttcacagaTTCAACTTGAGAGCAAAACATACAGAGAGGCCCTTAAAAGCCCTCTCCCAAGACAAATGTGTAGTGTGGTTTGCAAGCATTAAAGCATACAACCAACAACTGAAAGCTATTCCAAAAAACATCTCATACTTTCAGGGTTTTGTGGGTAAAAGGTGGCAAATATCGACTTTGTAACAGCAAATAGCTCTTCAGGTTTCATATTTTGGTGTGTTTTGGAAGGCCAAGCAGAACCGAGGTCATATAGATATGTTTAAAAGTAAGTTTAAAAGTAAACCTGTCTCttgaaaaagggagggaggaTTATGCCACATTTGGCTTTTAATGTCAATTGGAGATATGCGATTGAAGTGAGCATTTAGGTAtgacaggaaaataaaaataataaaaagatgaacGTTTGACAAAGTAAACCTGTTGGCTATAGTTGACAGAAAGGAAAGCTGTAGATACATGTGTGGTTACACTCTTTAGAGGACCAGAATGAGGACAACGTTATGGAGAAAATCGGTTTTCTGGTCTGTCTTTGAAAAGAGAGGCTGGGGTGCCTTCGACAAACTGGTTTGTGAGCCGTTGCAACTCTAAAAGAGCACCCTCCTTTTGTTGTGAGCCGGTTTGCATTTATGtggcttgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcagaggAAACAAGGTGCATTGGGAGCAGCAGTCCCTCAATTAAGGCTGTGCTCccagcgcagtttacatgccGAGCTCAGTGAGCCAGATGAGGAAATAACAGCCTCATTAGAACagccacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgaatccTTCTACCACACAACCTTTTAAGGCTTTCAAGCTGCTTTGGATCAAAGTCAGTCCCAGGGGATAATTCAGCAGAAACACTGACGTACTGCTGAATTCAATCTTTCAGACACATTTCAACACCTACTTGATCTTTTGCTTCACAAAAAAGGGAACTGATGTCCCTCCAGCCACTCGTCTTCGACTGGCATCGATTTGTTAGCTTCATCTGACTTCATCGCTGCTTTCGCAAAATCATTTGTTTTtagcaatttaaaaaatgttaaatgttcaaataataCTAAACCTAACGTCAAATTAGGATTGAAGAGGGAGCGTTCCCCCCTGAACAAAAACAAGGGCAATATTCACATCTTAGACTTAGCTTTAAGCCCCCATCTTAGAAGTTGCGAGAGTGCAACCGATGTGCCACAGACTGAAGCCGAAATGTATAAACAGCGCAGGggggaaagagaagaagaaataatTGTTAGAATTGTTACAGTGTTAAAACGAACCCCACCCTTGCCACGAGATTAGAACAGATAAACAGTACATTAGGCTATACGTATCATCATAGTTACCGTTAGATATATAGCAGTCGCAGCCATCCAGTTTTAGAAACACATTTGACTAAAAGGGAggggacaggaggaggagaactTTCTCTTTCTGGGGTTGggtttaaataaatattctgTTTTATAGTgggtgtgtttttctttaaagcCATCTTCTCCTCCGGCCTGGCGGGTTGGGAAGAGGGAGCGGCAGGGTTGGAGGGgg
>TU160792
CAGGTAGGTTTAATTCAAAACACTGCATCATAAAAGTTagtttttaaacattatttgaGGTACCGCTACTTTAAGCCTAAATTGGACCAgcttttttcaaataaataaaatggaacaaAGTCAAATAAACTGAGATTAGTGGCATTATCTTcaataaaacatcaaataaattgtgtgggtaaataaaaaaaactcacattagctgttttgtACATTATGTCTTTATTTGTGTGTAAACAAACTCTGAAAAGAGCATCAGCCAGGTTCTTGATTATTGGCATTAACATGATTGATTTCTTTTGCAGTCATGGATAAAACATGATCACTCCACtgctaaaaagaaaaaggtctTCCTTAAACAAGTCATATTAATTCTGTCCTTCAACcttatttcccccccccccccatcacagTCTTAAAAAGTAATGCTCTGACCATAACTTGAAACTGGCAGATCATTGTATTGATTTCAAAAAGGAAACACGTCCTTGGTACAGTCTTAAAAGAAAGTGAAATAATCTCACTCCATAACAGACTTTTCCACAATAAATATGATTTTAGGACTGGATAAATGACTTATTTGTGGCCTTTTTGCAGCGTATAGAACGGTACATATGAACGGTTTGCGACCTCAGTCTACGTGGTAGCTTCTTCTCATCTTACTTTGTGTATGCAGTGTTTCTTACTATTgtataaggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160786 True 2897 lncRNA 0.40 2 31912678 31915608
TU160790 False 2822 lncRNA 0.40 3 31912678 31915608
TU160792 False 777 lncRNA 0.36 3 31849438 31915814

Neighbor

gene id symbol gene type direction distance location
LOC120569109 LOC104940918,LOC103370533 coding downstream 28014 31802504 ~ 31821424 (-)
LOC120568044 LOC103370525 coding downstream 50100 31714287 ~ 31799338 (-)
LOC120568655 LOC107092454 coding downstream 138647 31696803 ~ 31710791 (-)
LOC120568656 NA coding downstream 156892 31682200 ~ 31692546 (-)
LOC120568926 NA coding downstream 647246 31200541 ~ 31202192 (-)
LOC120568565 NA coding upstream 573003 32488817 ~ 32513982 (-)
LOC120568566 NA coding upstream 608728 32524542 ~ 32538091 (-)
LOC120568564 kcnj10,LOC100694690,LOC101485288 coding upstream 622383 32538197 ~ 32555689 (-)
LOC120568447 NA coding upstream 678844 32594658 ~ 32600456 (-)
LOC120568440 NA coding upstream 687329 32603143 ~ 32614898 (-)
LOC120567841 NA non-coding downstream 185614 31660615 ~ 31663824 (-)
G119284 NA non-coding downstream 235114 31614016 ~ 31614324 (-)
G119260 NA non-coding downstream 394041 31455053 ~ 31455397 (-)
G119259 NA non-coding downstream 394480 31454479 ~ 31454958 (-)
G119249 NA non-coding downstream 432449 31416739 ~ 31416989 (-)
G119357 NA non-coding upstream 840 31916654 ~ 31917970 (-)
G119358 NA non-coding upstream 2225 31918039 ~ 31919127 (-)
G119368 lig1 non-coding upstream 33645 31949459 ~ 31966226 (-)
G119394 LOC104960271,LOC108428278,LOC103396779,LOC106525269,LOC103358974,LOC102300463 non-coding upstream 189530 32105344 ~ 32110517 (-)
G119455 NA non-coding upstream 207525 32123339 ~ 32124490 (-)
zeb1a LOC103364416,LOC100701828,LOC102292734,LOC101079552 other downstream 274245 31469595 ~ 31575193 (-)
LOC120568745 NA other downstream 392281 31455599 ~ 31457157 (-)
G119177 NA other downstream 674487 31126430 ~ 31174951 (-)
G119169 NA other downstream 677828 31169922 ~ 31171610 (-)
LOC120568929 NA other downstream 973327 30864246 ~ 30876111 (-)
G119379 NA other upstream 131663 32047477 ~ 32051439 (-)
G119465 cadm3,LOC106600493 other upstream 300688 32216502 ~ 32226360 (-)
LOC120568568 NA other upstream 448647 32364461 ~ 32374518 (-)
fcer1gl NA other upstream 845155 32760969 ~ 32765211 (-)
LOC120567697 copa,LOC103137970 other upstream 912550 32828364 ~ 32832509 (-)

Expression


Co-expression Network